BVES (blood vessel epicardial substance)

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Gene: BVES (blood vessel epicardial substance) Pan paniscus

Analyze

Symbol:

BVES

Name:

blood vessel epicardial substance

RGD ID:

11965545

Description:

ENCODES a protein that exhibits cAMP binding (ortholog); structural molecule activity (ortholog); INVOLVED IN cell migration involved in heart development (ortholog); epithelial cell-cell adhesion (ortholog); heart development (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2X (ortholog); limb-girdle muscular dystrophy (ortholog); FOUND IN bicellular tight junction (ortholog); caveola (ortholog); cell junction (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

RGD Orthologs

Human

Mouse

Rat

Chinchilla

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	6	106,784,465 - 106,822,050 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	106,787,615 - 106,822,050 (-)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	6	102,915,148 - 102,951,141 (-)	NCBI	Mhudiblu_PPA_v0		panPan3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal recessive limb-girdle muscular dystrophy type 2X (ISO)

limb-girdle muscular dystrophy (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell migration involved in heart development (ISO)

epithelial cell-cell adhesion (ISO)

heart development (ISO)

hematopoietic progenitor cell differentiation (ISO)

positive regulation of locomotion (ISO)

positive regulation of receptor recycling (ISO)

regulation of cell shape (ISO)

regulation of endocytic recycling (ISO)

regulation of GTPase activity (ISO)

regulation of heart rate (ISO)

regulation of membrane potential (ISO)

response to ischemia (ISO)

sinoatrial node cell development (ISO)

skeletal muscle tissue development (ISO)

substrate adhesion-dependent cell spreading (ISO)

vesicle docking (ISO)

vesicle-mediated transport (ISO)

Cellular Component

bicellular tight junction (ISO)

caveola (ISO)

cell junction (ISO)

cell projection membrane (ISO)

integral component of membrane (ISO)

lateral plasma membrane (ISO)

membrane (ISO)

plasma membrane (ISO)

sarcolemma (ISO)

Molecular Function

cAMP binding (ISO)

protein binding (ISO)

structural molecule activity (ISO)

References

Genomics

Comparative Map Data

BVES
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	6	106,784,465 - 106,822,050 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	106,787,615 - 106,822,050 (-)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	6	102,915,148 - 102,951,141 (-)	NCBI	Mhudiblu_PPA_v0		panPan3

BVES
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	6	105,096,822 - 105,137,157 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	6	105,096,822 - 105,137,157 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	6	105,544,697 - 105,585,032 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
GRCh37	6	105,544,697 - 105,585,049 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	105,651,390 - 105,691,236 (-)	NCBI	NCBI36		hg18	NCBI36
Build 34	6	105,651,393 - 105,690,914	NCBI
Celera	6	106,167,189 - 106,206,693 (-)	NCBI
Cytogenetic Map	6	q21	NCBI
HuRef	6	102,987,978 - 103,028,002 (-)	NCBI		HuRef
CHM1_1	6	105,806,724 - 105,846,753 (-)	NCBI		CHM1_1

Bves
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	45,211,783 - 45,248,580 (+)	NCBI	GRCm39		mm39
GRCm38	10	45,335,735 - 45,372,484 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	45,335,772 - 45,372,479 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	45,055,568 - 45,089,514 (+)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	10	45,024,177 - 45,058,123 (+)	NCBI			mm8
Celera	10	46,209,822 - 46,242,144 (+)	NCBI		Celera
Cytogenetic Map	10	B2	NCBI
cM Map	10	23.47	NCBI

Bves
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	20	48,819,241 - 48,860,282 (+)	NCBI
Rnor_6.0 Ensembl	20	50,439,883 - 50,474,678 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0	20	50,439,885 - 50,474,678 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	20	52,052,628 - 52,086,539 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	20	49,671,174 - 49,671,683 (+)	NCBI	RGSC3.4		rn4	RGSC3.4
Celera	20	51,164,981 - 51,200,377 (-)	NCBI		Celera
Cytogenetic Map	20	q13	NCBI

Bves
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955411	30,517,875 - 30,551,335 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955411	30,517,917 - 30,548,424 (-)	NCBI	ChiLan1.0	ChiLan1.0

BVES
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1 Ensembl	12	62,545,666 - 62,579,548 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
CanFam3.1	12	62,542,274 - 62,581,110 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1

Bves
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
SpeTri2.0	NW_004936564	1,791,733 - 1,823,421 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

BVES
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	71,314,274 - 71,360,176 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	71,316,354 - 71,360,255 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	80,636,881 - 80,681,079 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

BVES
(Chlorocebus sabaeus - African green monkey)

Vervet Assembly	Chr	Position (strand)	Source	Genome Browsers
Vervet Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	13	68,668,248 - 68,704,661 (+)	NCBI
ChlSab1.1 Ensembl	13	68,668,321 - 68,707,885 (+)	Ensembl

Bves
(Heterocephalus glaber - naked mole-rat)

Molerat Assembly	Chr	Position (strand)	Source	Genome Browsers
Molerat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624952	326,812 - 360,790 (-)	NCBI

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_034962624	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	SSBP01000165	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSPPAT00000050381 ⟹ ENSPPAP00000027541

RefSeq Status:

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	6	106,787,615 - 106,822,050 (-)	Ensembl

RefSeq Acc Id:

XM_034962624 ⟹ XP_034818515

RefSeq Status:

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
Mhudiblu_PPA_v0	6	102,915,148 - 102,951,141 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_034818515	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

XP_034818515 ⟸ XM_034962624

RefSeq Acc Id:

ENSPPAP00000027541 ⟸ ENSPPAT00000050381

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000036836	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein	ENSPPAP00000027541	UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000050381	UniProtKB/TrEMBL
Gene3D-CATH	2.60.120.10	UniProtKB/TrEMBL
InterPro	cNMP-bd-like	UniProtKB/TrEMBL
	Popeye_prot	UniProtKB/TrEMBL
	RmlC-like_jellyroll	UniProtKB/TrEMBL
KEGG Report	pps:100981011	UniProtKB/TrEMBL
NCBI Gene	BVES	ENTREZGENE
PANTHER	PTHR12101	UniProtKB/TrEMBL
Pfam	Popeye	UniProtKB/TrEMBL
Superfamily-SCOP	SSF51206	UniProtKB/TrEMBL
UniProt	A0A2R9BGX9_PANPA	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM