TMEM126B (transmembrane protein 126B) - Rat Genome Database

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Gene: TMEM126B (transmembrane protein 126B) Pan paniscus
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Symbol: TMEM126B
Name: transmembrane protein 126B
RGD ID: 11964507
Description: INVOLVED IN mitochondrion organization (ortholog); response to food (ortholog); ASSOCIATED WITH exudative vitreoretinopathy 1 (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN membrane (inferred); mitochondrion (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: complex I assembly factor TMEM126B, mitochondrial
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2986,551,619 - 86,559,558 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11187,602,591 - 87,610,529 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01180,684,485 - 80,692,441 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11184,293,117 - 84,301,032 (+)NCBIpanpan1.1PanPan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
membrane  (IEA)
mitochondrion  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
TMEM126B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2986,551,619 - 86,559,558 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11187,602,591 - 87,610,529 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01180,684,485 - 80,692,441 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11184,293,117 - 84,301,032 (+)NCBIpanpan1.1PanPan1.1panPan2
TMEM126B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381185,628,573 - 85,636,540 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1185,628,573 - 85,636,539 (+)EnsemblGRCh38hg38GRCh38
GRCh371185,339,617 - 85,347,584 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361185,017,310 - 85,025,186 (+)NCBINCBI36Build 36hg18NCBI36
Celera1182,648,936 - 82,656,897 (+)NCBICelera
Cytogenetic Map11q14.1NCBI
HuRef1181,636,910 - 81,644,876 (+)NCBIHuRef
CHM1_11185,224,408 - 85,232,374 (+)NCBICHM1_1
T2T-CHM13v2.01185,565,250 - 85,573,217 (+)NCBIT2T-CHM13v2.0
Tmem126b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39790,118,041 - 90,125,203 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl790,116,646 - 90,125,209 (-)EnsemblGRCm39 Ensembl
GRCm38790,468,833 - 90,475,995 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl790,467,438 - 90,476,001 (-)EnsemblGRCm38mm10GRCm38
MGSCv37797,617,343 - 97,624,505 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36790,344,020 - 90,351,187 (-)NCBIMGSCv36mm8
Celera787,796,285 - 87,803,452 (-)NCBICelera
Cytogenetic Map7E1NCBI
cM Map750.6NCBI
Tmem126b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81153,852,081 - 153,864,038 (-)NCBIGRCr8
mRatBN7.21144,437,142 - 144,451,508 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1144,437,145 - 144,451,435 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1152,362,342 - 152,374,182 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01159,543,501 - 159,555,360 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01152,417,418 - 152,429,275 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01156,262,220 - 156,274,207 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1156,262,031 - 156,275,002 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01162,508,342 - 162,520,329 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41147,146,180 - 147,158,120 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11147,224,580 - 147,236,535 (-)NCBI
Celera1142,659,948 - 142,671,836 (-)NCBICelera
Cytogenetic Map1q32NCBI
Tmem126b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554147,234,610 - 7,245,519 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554147,235,864 - 7,245,595 (-)NCBIChiLan1.0ChiLan1.0
TMEM126B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12113,813,669 - 13,820,389 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2113,813,783 - 13,820,314 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2113,680,242 - 13,686,980 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02113,994,361 - 14,001,071 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.12113,782,862 - 13,789,592 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02113,855,169 - 13,861,878 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02113,907,994 - 13,914,733 (-)NCBIUU_Cfam_GSD_1.0
Tmem126b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494771,920,242 - 71,927,159 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649813,519,851 - 13,529,032 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649813,519,751 - 13,526,770 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TMEM126B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl919,547,647 - 19,556,793 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1919,547,664 - 19,555,247 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2921,817,760 - 21,825,894 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TMEM126B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1176,869,434 - 76,876,282 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl176,869,431 - 76,876,342 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604348,849,640 - 48,856,500 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tmem126b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248454,302,262 - 4,309,111 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: XM_003832960   ⟹   XP_003833008
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2986,551,619 - 86,559,558 (+)NCBI
NHGRI_mPanPan11187,602,591 - 87,610,529 (+)NCBI
Mhudiblu_PPA_v01180,684,485 - 80,692,441 (+)NCBI
PanPan1.11184,293,122 - 84,301,032 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008958424   ⟹   XP_008956672
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2986,551,634 - 86,559,558 (+)NCBI
NHGRI_mPanPan11187,602,606 - 87,610,529 (+)NCBI
Mhudiblu_PPA_v01180,684,494 - 80,692,441 (+)NCBI
PanPan1.11184,293,119 - 84,301,032 (+)NCBI
Sequence:
RefSeq Acc Id: XM_014346953   ⟹   XP_014202439
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2986,551,628 - 86,559,558 (+)NCBI
NHGRI_mPanPan11187,602,610 - 87,610,529 (+)NCBI
Mhudiblu_PPA_v01180,684,499 - 80,692,441 (+)NCBI
PanPan1.11184,293,133 - 84,301,032 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024930637   ⟹   XP_024786405
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2986,551,675 - 86,559,558 (+)NCBI
NHGRI_mPanPan11187,602,647 - 87,610,529 (+)NCBI
Mhudiblu_PPA_v01180,684,528 - 80,692,441 (+)NCBI
PanPan1.11184,293,117 - 84,301,032 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003833008 (Get FASTA)   NCBI Sequence Viewer  
  XP_008956672 (Get FASTA)   NCBI Sequence Viewer  
  XP_014202439 (Get FASTA)   NCBI Sequence Viewer  
  XP_024786405 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000030122.1
RefSeq Acc Id: XP_008956672   ⟸   XM_008958424
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_003833008   ⟸   XM_003832960
- Peptide Label: isoform X1
- UniProtKB: A0A2R9BNV7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_014202439   ⟸   XM_014346953
- Peptide Label: isoform X2
- UniProtKB: A0A2R9BNV7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_024786405   ⟸   XM_024930637
- Peptide Label: isoform X4
- Sequence:


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000038072 UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000052980.1 UniProtKB/TrEMBL
InterPro TMEM126 UniProtKB/TrEMBL
NCBI Gene TMEM126B ENTREZGENE
PANTHER COMPLEX I ASSEMBLY FACTOR TMEM126B, MITOCHONDRIAL UniProtKB/TrEMBL
  UNCHARACTERIZED HYPOTHALAMUS PROTEIN HT007 UniProtKB/TrEMBL
Pfam TMEM126 UniProtKB/TrEMBL
UniProt A0A2R9BNV7 ENTREZGENE, UniProtKB/TrEMBL