LOC100982351 (ubiquinol-cytochrome c reductase complex assembly factor 2) - Rat Genome Database

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Gene: LOC100982351 (ubiquinol-cytochrome c reductase complex assembly factor 2) Pan paniscus
Analyze
Symbol: LOC100982351 (Ensembl: UQCC2)
Name: ubiquinol-cytochrome c reductase complex assembly factor 2
RGD ID: 11963520
Description: INVOLVED IN mitochondrial respiratory chain complex III assembly (inferred); positive regulation of mitochondrial translation (inferred); regulation of insulin secretion (inferred); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 5 (ortholog); mitochondrial complex III deficiency nuclear type 1 (ortholog); mitochondrial complex III deficiency nuclear type 7 (ortholog); FOUND IN mitochondrial inner membrane (inferred); mitochondrial intermembrane space (inferred); mitochondrial matrix (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: mitochondrial nucleoid factor 1; MNF1; ubiquinol-cytochrome-c reductase complex assembly factor 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2548,176,491 - 48,190,661 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1644,043,633 - 44,057,778 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0633,270,785 - 33,284,931 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1634,379,212 - 34,393,373 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl634,379,212 - 34,393,373 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
LOC100982351
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2548,176,491 - 48,190,661 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1644,043,633 - 44,057,778 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0633,270,785 - 33,284,931 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1634,379,212 - 34,393,373 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl634,379,212 - 34,393,373 (-)Ensemblpanpan1.1panPan2
UQCC2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38633,696,764 - 33,711,700 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl633,694,293 - 33,711,727 (-)EnsemblGRCh38hg38GRCh38
GRCh37633,664,541 - 33,679,477 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36633,773,324 - 33,787,482 (-)NCBINCBI36Build 36hg18NCBI36
Build 34633,773,323 - 33,787,482NCBI
Celera635,219,736 - 35,233,893 (-)NCBICelera
Cytogenetic Map6p21.31NCBI
HuRef633,406,194 - 33,421,183 (-)NCBIHuRef
CHM1_1633,666,828 - 33,681,817 (-)NCBICHM1_1
T2T-CHM13v2.0633,517,949 - 33,532,883 (-)NCBIT2T-CHM13v2.0
Uqcc2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391727,341,639 - 27,352,865 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1727,341,637 - 27,352,890 (-)EnsemblGRCm39 Ensembl
GRCm381727,122,665 - 27,133,891 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1727,122,663 - 27,133,916 (-)EnsemblGRCm38mm10GRCm38
MGSCv371727,259,610 - 27,270,836 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361726,850,254 - 26,861,480 (-)NCBIMGSCv36mm8
Celera1727,658,935 - 27,670,148 (-)NCBICelera
Cytogenetic Map17A3.3NCBI
cM Map1713.75NCBI
Uqcc2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8205,204,682 - 5,217,080 (-)NCBIGRCr8
mRatBN7.2205,202,837 - 5,214,541 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl205,202,837 - 5,214,164 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx205,928,059 - 5,939,883 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0205,289,808 - 5,301,632 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0205,769,105 - 5,780,935 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0205,712,200 - 5,723,902 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl205,712,203 - 5,723,902 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0207,775,855 - 7,787,605 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4205,358,000 - 5,369,728 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1205,358,230 - 5,371,733 (-)NCBI
Celera206,782,273 - 6,793,956 (-)NCBICelera
Cytogenetic Map20p12NCBI
LOC102009757
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554372,107,475 - 2,119,892 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554372,107,475 - 2,119,892 (-)NCBIChiLan1.0ChiLan1.0
UQCC2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1123,050,329 - 3,063,831 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl123,050,329 - 3,063,801 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha123,066,234 - 3,079,732 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0123,382,293 - 3,395,793 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl123,382,293 - 3,395,766 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1123,048,991 - 3,062,492 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0123,130,312 - 3,144,071 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0123,228,320 - 3,241,835 (-)NCBIUU_Cfam_GSD_1.0
LOC101975274
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494638,706,210 - 38,718,848 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647625,241,369 - 25,254,171 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647625,241,426 - 25,254,057 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
UQCC2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl729,899,043 - 29,929,795 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1729,902,089 - 29,929,802 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2734,509,875 - 34,537,584 (-)NCBISscrofa10.2Sscrofa10.2susScr3
UQCC2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11738,366,871 - 38,380,841 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1738,366,907 - 38,380,841 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604433,536,834 - 33,550,765 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
LOC101706352
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475423,215,962 - 23,227,895 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475423,215,920 - 23,227,895 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003808558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSPPAT00000056933   ⟹   ENSPPAP00000034052
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl634,379,212 - 34,393,373 (-)Ensembl
Ensembl Acc Id: ENSPPAT00000056943   ⟹   ENSPPAP00000034062
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl634,379,302 - 34,393,314 (-)Ensembl
RefSeq Acc Id: XM_003808558   ⟹   XP_003808606
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2548,176,491 - 48,190,661 (-)NCBI
NHGRI_mPanPan1644,043,633 - 44,057,778 (-)NCBI
Mhudiblu_PPA_v0633,270,785 - 33,284,931 (-)NCBI
PanPan1.1634,379,212 - 34,393,373 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003808606 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000034052
  ENSPPAP00000034052.1
  ENSPPAP00000034062.1
RefSeq Acc Id: XP_003808606   ⟸   XM_003808558
- UniProtKB: A0A2R9BWJ1 (UniProtKB/TrEMBL),   A0A2R9BWK0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSPPAP00000034052   ⟸   ENSPPAT00000056933
Ensembl Acc Id: ENSPPAP00000034062   ⟸   ENSPPAT00000056943


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000039893 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000056933.1 UniProtKB/TrEMBL
  ENSPPAT00000056943.1 UniProtKB/TrEMBL
InterPro UQCC2 UniProtKB/TrEMBL
  UQCC2/CBP6 UniProtKB/TrEMBL
KEGG Report pps:100982351 UniProtKB/TrEMBL
NCBI Gene LOC100982351 ENTREZGENE
PANTHER PTHR34260 UniProtKB/TrEMBL
  UBIQUINOL-CYTOCHROME-C REDUCTASE COMPLEX ASSEMBLY FACTOR 2 UniProtKB/TrEMBL
Pfam UQCC2_CBP6 UniProtKB/TrEMBL
UniProt A0A2R9BWJ1 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9BWK0 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-03-13 LOC100982351  ubiquinol-cytochrome c reductase complex assembly factor 2  LOC100982351  ubiquinol-cytochrome-c reductase complex assembly factor 2  Symbol and/or name change 5135510 APPROVED