ELAPOR1 (endosome-lysosome associated apoptosis and autophagy regulator 1) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: ELAPOR1 (endosome-lysosome associated apoptosis and autophagy regulator 1) Pan paniscus
Analyze
Symbol: ELAPOR1
Name: endosome-lysosome associated apoptosis and autophagy regulator 1
RGD ID: 11957540
Description: INVOLVED IN autophagosome assembly (inferred); autophagy (inferred); cellular response to starvation (inferred); ASSOCIATED WITH autistic disorder (ortholog); hereditary spastic paraplegia 63 (ortholog); FOUND IN endoplasmic reticulum (inferred); endoplasmic reticulum membrane (inferred); endosome (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: endosome/lysosome-associated apoptosis and autophagy regulator 1; KIAA1324; KIAA1324 ortholog; UPF0577 protein KIAA1324 homolog
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21118,100,092 - 118,191,353 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11117,260,051 - 117,351,423 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01111,490,488 - 111,583,703 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11110,654,623 - 110,744,543 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1110,654,844 - 110,744,323 (+)EnsemblpanPan2panpan1.1
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
ELAPOR1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21118,100,092 - 118,191,353 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11117,260,051 - 117,351,423 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01111,490,488 - 111,583,703 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11110,654,623 - 110,744,543 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1110,654,844 - 110,744,323 (+)EnsemblpanPan2panpan1.1
ELAPOR1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381109,114,115 - 109,206,781 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1109,113,679 - 109,206,781 (+)Ensemblhg38GRCh38
GRCh371109,656,737 - 109,749,403 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361109,458,056 - 109,547,377 (+)NCBIBuild 36Build 36hg18NCBI36
Celera1107,925,989 - 108,018,762 (+)NCBICelera
Cytogenetic Map1p13.3NCBI
HuRef1107,549,937 - 107,642,627 (+)NCBIHuRef
CHM1_11109,771,250 - 109,864,198 (+)NCBICHM1_1
T2T-CHM13v2.01109,146,975 - 109,239,594 (+)NCBIT2T-CHM13v2.0
Elapor1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393108,362,995 - 108,444,064 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3108,363,010 - 108,443,852 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm383108,455,679 - 108,536,745 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3108,455,694 - 108,536,536 (-)Ensemblmm10GRCm38
MGSCv373108,260,987 - 108,339,440 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv363108,586,125 - 108,664,578 (-)NCBIMGSCv36mm8
Celera3110,792,283 - 110,871,416 (-)NCBICelera
Cytogenetic Map3F3NCBI
cM Map347.14NCBI
Elapor1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82198,777,323 - 198,856,497 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl2198,777,323 - 198,856,497 (-)EnsemblGRCr8
mRatBN7.22196,089,199 - 196,169,055 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2196,091,646 - 196,168,716 (-)EnsemblmRatBN7.2
Rnor_6.02211,243,398 - 211,323,283 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2211,246,068 - 211,322,719 (-)Ensemblrn6Rnor6.0
Rnor_5.02230,713,564 - 230,792,887 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.42204,016,795 - 204,085,212 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera2188,735,969 - 188,814,775 (-)NCBICelera
RGSC_v3.12203,984,643 - 204,062,759 (-)NCBI
Cytogenetic Map2q34NCBI
Elapor1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543512,531,642 - 12,627,874 (+)Ensembl
ChiLan1.0NW_00495543512,531,651 - 12,626,969 (+)NCBIChiLan1.0ChiLan1.0
ELAPOR1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1642,612,130 - 42,681,161 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl642,613,546 - 42,681,015 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha645,385,697 - 45,455,848 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0642,942,285 - 43,012,558 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl642,942,417 - 43,013,284 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1642,673,609 - 42,743,779 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0642,631,650 - 42,701,825 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0643,067,018 - 43,137,157 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Elapor1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505819,374,997 - 19,460,830 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936704653,403 - 739,151 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936704653,434 - 736,660 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ELAPOR1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl4110,881,768 - 110,953,967 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.14110,881,770 - 110,954,092 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24121,375,550 - 121,448,499 (-)NCBISscrofa10.2Sscrofa10.2susScr3
LOC103224299
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12024,357,584 - 24,365,702 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2024,339,729 - 24,380,162 (-)NCBIChlSab1.1 EnsemblchlSab2Vervet-AGM
ChlSab1.1 Ensembl2024,339,729 - 24,380,162 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366603833,967,182 - 33,981,820 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Elapor1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247724,873,468 - 4,953,655 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247724,873,473 - 4,950,868 (+)NCBIHetGla 1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSPPAT00000037013   ⟹   ENSPPAP00000014331
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1110,654,844 - 110,744,323 (+)Ensembl
Ensembl Acc Id: ENSPPAT00000037019   ⟹   ENSPPAP00000014337
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1110,654,844 - 110,744,323 (+)Ensembl
Ensembl Acc Id: ENSPPAT00000037026   ⟹   ENSPPAP00000014344
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1110,699,722 - 110,744,323 (+)Ensembl
RefSeq Acc Id: XM_034932714   ⟹   XP_034788605
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21118,100,092 - 118,190,333 (-)NCBI
NHGRI_mPanPan11117,260,051 - 117,350,387 (-)NCBI
Mhudiblu_PPA_v01111,490,678 - 111,583,703 (+)NCBI
RefSeq Acc Id: XM_034932720   ⟹   XP_034788611
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21118,100,092 - 118,191,347 (-)NCBI
NHGRI_mPanPan11117,260,051 - 117,351,417 (-)NCBI
Mhudiblu_PPA_v01111,490,488 - 111,583,703 (+)NCBI
RefSeq Acc Id: XM_034932736   ⟹   XP_034788627
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21118,100,092 - 118,190,215 (-)NCBI
NHGRI_mPanPan11117,260,051 - 117,350,269 (-)NCBI
Mhudiblu_PPA_v01111,490,643 - 111,583,703 (+)NCBI
RefSeq Acc Id: XM_034932739   ⟹   XP_034788630
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21118,100,092 - 118,130,789 (-)NCBI
NHGRI_mPanPan11117,260,051 - 117,290,828 (-)NCBI
Mhudiblu_PPA_v01111,550,133 - 111,583,703 (+)NCBI
RefSeq Acc Id: XM_055115033   ⟹   XP_054971008
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21118,100,092 - 118,190,358 (-)NCBI
NHGRI_mPanPan11117,260,051 - 117,350,412 (-)NCBI
RefSeq Acc Id: XM_055115047   ⟹   XP_054971022
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21118,100,092 - 118,191,353 (-)NCBI
NHGRI_mPanPan11117,260,051 - 117,351,423 (-)NCBI
RefSeq Acc Id: XM_055115056   ⟹   XP_054971031
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21118,100,092 - 118,190,257 (-)NCBI
NHGRI_mPanPan11117,260,051 - 117,350,311 (-)NCBI
RefSeq Acc Id: XM_055115064   ⟹   XP_054971039
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21118,100,092 - 118,190,305 (-)NCBI
NHGRI_mPanPan11117,260,051 - 117,350,359 (-)NCBI
RefSeq Acc Id: XM_055115068   ⟹   XP_054971043
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21118,100,092 - 118,190,281 (-)NCBI
NHGRI_mPanPan11117,260,051 - 117,350,335 (-)NCBI
RefSeq Acc Id: XM_055115075   ⟹   XP_054971050
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21118,100,092 - 118,190,281 (-)NCBI
NHGRI_mPanPan11117,260,051 - 117,350,335 (-)NCBI
RefSeq Acc Id: XM_055115080   ⟹   XP_054971055
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21118,100,092 - 118,190,328 (-)NCBI
NHGRI_mPanPan11117,260,051 - 117,350,382 (-)NCBI
RefSeq Acc Id: XP_034788611   ⟸   XM_034932720
- Peptide Label: isoform X1
- UniProtKB: A0A2R9ABQ9 (UniProtKB/TrEMBL),   A0A2R9AAQ1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034788627   ⟸   XM_034932736
- Peptide Label: isoform X4
- UniProtKB: A0A2R9AG72 (UniProtKB/TrEMBL),   A0A2R9AAQ1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034788605   ⟸   XM_034932714
- Peptide Label: isoform X1
- UniProtKB: A0A2R9ABQ9 (UniProtKB/TrEMBL),   A0A2R9AAQ1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034788630   ⟸   XM_034932739
- Peptide Label: isoform X5
Ensembl Acc Id: ENSPPAP00000014344   ⟸   ENSPPAT00000037026
Ensembl Acc Id: ENSPPAP00000014337   ⟸   ENSPPAT00000037019
Ensembl Acc Id: ENSPPAP00000014331   ⟸   ENSPPAT00000037013
RefSeq Acc Id: XP_054971022   ⟸   XM_055115047
- Peptide Label: isoform X1
- UniProtKB: A0A2R9AAQ1 (UniProtKB/TrEMBL),   A0A2R9ABQ9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054971008   ⟸   XM_055115033
- Peptide Label: isoform X1
- UniProtKB: A0A2R9AAQ1 (UniProtKB/TrEMBL),   A0A2R9ABQ9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054971055   ⟸   XM_055115080
- Peptide Label: isoform X3
- UniProtKB: A0A2R9AAQ1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054971039   ⟸   XM_055115064
- Peptide Label: isoform X2
- UniProtKB: A0A2R9AAQ1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054971043   ⟸   XM_055115068
- Peptide Label: isoform X2
- UniProtKB: A0A2R9AAQ1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054971050   ⟸   XM_055115075
- Peptide Label: isoform X3
- UniProtKB: A0A2R9AAQ1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054971031   ⟸   XM_055115056
- Peptide Label: isoform X1
- UniProtKB: A0A2R9AAQ1 (UniProtKB/TrEMBL),   A0A2R9ABQ9 (UniProtKB/TrEMBL)
Protein Domains
MRH


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000030266 Ensembl, UniProtKB/TrEMBL
  ENSPPAG00050014324 ENTREZGENE
Ensembl Transcript ENSPPAT00000037013.1 UniProtKB/TrEMBL
  ENSPPAT00000037019.1 UniProtKB/TrEMBL
  ENSPPAT00000037026.1 UniProtKB/TrEMBL
  ENSPPAT00050030197 ENTREZGENE
  ENSPPAT00050030230 ENTREZGENE
  ENSPPAT00050030244 ENTREZGENE
Gene3D-CATH 2.70.130.10 UniProtKB/TrEMBL
  Tumor Necrosis Factor Receptor, subunit A, domain 2 UniProtKB/TrEMBL
InterPro EIG121-like UniProtKB/TrEMBL
  Elapor1-like_3rd UniProtKB/TrEMBL
  Elapor1/2_C UniProtKB/TrEMBL
  Elapor1/2_GBD UniProtKB/TrEMBL
  Elapor1/2_MRH UniProtKB/TrEMBL
  Elapor1/2_TNFR-like UniProtKB/TrEMBL
  Growth_fac_rcpt_cys_sf UniProtKB/TrEMBL
  Man6P_isomerase_rcpt-bd_dom_sf UniProtKB/TrEMBL
  MRH_dom UniProtKB/TrEMBL
NCBI Gene KIAA1324 ENTREZGENE
PANTHER ENDOSOME/LYSOSOME-ASSOCIATED APOPTOSIS AND AUTOPHAGY REGULATOR 1 UniProtKB/TrEMBL
  PTHR22727 UniProtKB/TrEMBL
Pfam ELAPOR1_C UniProtKB/TrEMBL
  GBD_ELAPOR1 UniProtKB/TrEMBL
  GBD_ELAPOR1-like_3rd UniProtKB/TrEMBL
  MRH_ELAPOR1_9th UniProtKB/TrEMBL
  TNFR_ELAPOR1_6th UniProtKB/TrEMBL
PROSITE MRH UniProtKB/TrEMBL
SMART Ephrin_rec_like UniProtKB/TrEMBL
Superfamily-SCOP SSF50911 UniProtKB/TrEMBL
  SSF57184 UniProtKB/TrEMBL
UniProt A0A2R9AAQ1 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9ABQ9 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9AG72 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-03-10 ELAPOR1  endosome-lysosome associated apoptosis and autophagy regulator 1  KIAA1324  KIAA1324 ortholog  Symbol and/or name change 5135510 APPROVED