LOC100979196 (sulfotransferase 1A3)

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Gene: LOC100979196 (sulfotransferase 1A3) Pan paniscus

Analyze

Symbol:

LOC100979196

Name:

sulfotransferase 1A3

RGD ID:

11952978

Description:

ENCODES a protein that exhibits amine sulfotransferase activity (ortholog); aryl sulfotransferase activity (ortholog); sulfate binding (ortholog); INVOLVED IN 3'-phosphoadenosine 5'-phosphosulfate metabolic process (ortholog); calcineurin-mediated signaling (ortholog); cellular response to dopamine (ortholog); PARTICIPATES IN paracetamol pharmacokinetics pathway; ASSOCIATED WITH 16p11.2 Deletion Syndrome (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

LOC100970787; LOC100994224; sulfotransferase 1A1-like; sulfotransferase family 1A member 3; SULT1A3; uncharacterized LOC100970787

RGD Orthologs

Human

Green Monkey

Alliance Genes

More Info

more info ...

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	16	30,565,959 - 30,569,183 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
Mhudiblu_PPA_v0	17	12,698,447 - 12,703,949 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

16p11.2 Deletion Syndrome (ISO)

autism spectrum disorder (ISO)

autistic disorder (ISO)

chromosome 16p11.2 deletion syndrome (ISO)

schizophrenia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

3'-phosphoadenosine 5'-phosphosulfate metabolic process (ISO)

calcineurin-mediated signaling (ISO)

cellular response to dopamine (ISO)

dopamine catabolic process (ISO)

dopamine receptor signaling pathway (ISO)

ERK1 and ERK2 cascade (ISO)

ethanol catabolic process (ISO)

flavonoid metabolic process (ISO)

negative regulation of neuron death (ISO)

NMDA selective glutamate receptor signaling pathway (ISO)

sulfation (ISO)

xenobiotic metabolic process (ISO)

Molecular Function

amine sulfotransferase activity (ISO)

aryl sulfotransferase activity (ISO)

protein binding (ISO)

sulfate binding (ISO)

sulfotransferase activity (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

paracetamol pharmacokinetics pathway (ISO)

References

Genomics

Comparative Map Data

LOC100979196
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	16	30,565,959 - 30,569,183 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
Mhudiblu_PPA_v0	17	12,698,447 - 12,703,949 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3

SULT1A3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	16	30,199,255 - 30,204,310 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p13 Ensembl	16	30,199,228 - 30,204,310 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	16	30,210,576 - 30,215,631 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	16	30,113,244 - 30,123,151 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	16	30,118,036 - 30,123,128	NCBI
Cytogenetic Map	16	p11.2	NCBI
HuRef	16	27,873,190 - 27,878,288 (+)	NCBI		HuRef
CHM1_1	16	31,527,545 - 31,532,645 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	16	30,483,809 - 30,488,863 (+)	NCBI		T2T-CHM13v2.0

LOC103230462
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	26,469,450 - 26,474,416 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666068	3,075,608 - 3,079,214 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_034941695	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034941696	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	SSBP01000390	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

XM_034941695 ⟹ XP_034797586

RefSeq Status:

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
Mhudiblu_PPA_v0	17	12,698,447 - 12,702,224 (-)	NCBI

RefSeq Acc Id:

XM_034941696 ⟹ XP_034797587

RefSeq Status:

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
Mhudiblu_PPA_v0	17	12,698,447 - 12,703,949 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_034797586	(Get FASTA)	NCBI Sequence Viewer
	XP_034797587	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

XP_034797587 ⟸ XM_034941696

RefSeq Acc Id:

XP_034797586 ⟸ XM_034941695

Additional Information

External Database Links

Database	Acc Id	Source(s)
NCBI Gene	SULT1A3	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2020-07-01	LOC100979196	sulfotransferase 1A3	SULT1A3	sulfotransferase family 1A member 3	Symbol and/or name change	5135510	APPROVED
2020-06-11	SULT1A3	sulfotransferase family 1A member 3	LOC100994224	sulfotransferase 1A1-like	Data Merged	737654	PROVISIONAL
2020-06-11	SULT1A3	sulfotransferase family 1A member 3	LOC100970787	uncharacterized LOC100970787	Data Merged	737654	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

RGD Manual Annotations

Imported Annotations - SMPDB

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Imported Disease Annotations - ClinVar

RGD Manual Annotations

Imported Annotations - SMPDB