PPP2R5D (protein phosphatase 2 regulatory subunit B'delta) - Rat Genome Database

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Gene: PPP2R5D (protein phosphatase 2 regulatory subunit B'delta) Pan paniscus
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Symbol: PPP2R5D
Name: protein phosphatase 2 regulatory subunit B'delta
RGD ID: 11950729
Description: ENCODES a protein that exhibits phosphoprotein phosphatase activity (inferred); protein phosphatase regulator activity (inferred); INVOLVED IN negative regulation of peptidyl-threonine phosphorylation (ortholog); positive regulation of protein dephosphorylation (ortholog); PARTICIPATES IN dopamine signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH autosomal dominant non-syndromic intellectual disability 35 (ortholog); brain disease (ortholog); Developmental Disabilities (ortholog); FOUND IN protein phosphatase type 2A complex (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1643,871,939 - 43,899,183 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl643,871,915 - 43,899,183 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0642,576,759 - 42,604,609 (+)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Genomics

Comparative Map Data
PPP2R5D
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1643,871,939 - 43,899,183 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl643,871,915 - 43,899,183 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0642,576,759 - 42,604,609 (+)NCBIMhudiblu_PPA_v0panPan3
PPP2R5D
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38642,984,570 - 43,012,342 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl642,984,553 - 43,012,342 (+)EnsemblGRCh38hg38GRCh38
GRCh37642,952,308 - 42,980,080 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36643,060,308 - 43,088,058 (+)NCBINCBI36hg18NCBI36
Build 34643,060,307 - 43,088,056NCBI
Celera644,504,572 - 44,532,321 (+)NCBI
Cytogenetic Map6p21.1NCBI
HuRef642,669,485 - 42,697,406 (+)NCBIHuRef
CHM1_1642,954,714 - 42,982,536 (+)NCBICHM1_1
Ppp2r5d
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391746,993,917 - 47,015,952 (-)NCBIGRCm39mm39
GRCm39 Ensembl1746,993,917 - 47,016,037 (-)Ensembl
GRCm381746,682,991 - 46,705,026 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1746,682,991 - 46,705,111 (-)EnsemblGRCm38mm10GRCm38
MGSCv371746,819,940 - 46,841,951 (-)NCBIGRCm37mm9NCBIm37
MGSCv361746,146,183 - 46,168,138 (-)NCBImm8
Celera1750,118,859 - 50,140,684 (-)NCBICelera
Cytogenetic Map17CNCBI
cM Map1722.9NCBI
Ppp2r5d
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2914,270,364 - 14,300,396 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl914,268,745 - 14,300,400 (+)Ensembl
Rnor_6.0916,580,995 - 16,610,425 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl916,586,803 - 16,609,631 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0915,487,588 - 15,516,365 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4910,054,005 - 10,078,501 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1910,052,322 - 10,075,842 (-)NCBI
Celera912,018,838 - 12,048,685 (+)NCBICelera
Cytogenetic Map9q12NCBI
Ppp2r5d
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554378,968,565 - 8,986,654 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554378,968,517 - 8,987,680 (+)NCBIChiLan1.0ChiLan1.0
PPP2R5D
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11211,519,194 - 11,540,658 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1211,519,092 - 11,540,109 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1211,546,203 - 11,567,685 (+)NCBI
ROS_Cfam_1.01212,000,391 - 12,022,031 (+)NCBI
ROS_Cfam_1.0 Ensembl1212,000,402 - 12,022,025 (+)Ensembl
UMICH_Zoey_3.11211,528,808 - 11,550,658 (+)NCBI
UNSW_CanFamBas_1.01211,613,067 - 11,634,732 (+)NCBI
UU_Cfam_GSD_1.01211,707,145 - 11,728,788 (+)NCBI
Ppp2r5d
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494647,015,621 - 47,037,998 (+)NCBI
SpeTri2.0NW_00493647616,922,204 - 16,945,400 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PPP2R5D
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl738,055,589 - 38,079,867 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1738,055,589 - 38,078,429 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2743,503,956 - 43,526,797 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PPP2R5D
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11729,147,560 - 29,175,700 (-)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl1729,145,918 - 29,174,997 (-)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604443,047,236 - 43,075,295 (+)NCBIVero_WHO_p1.0
Ppp2r5d
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462475416,487,275 - 16,507,539 (-)NCBIHetGla_female_1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003833272 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide SSBP01000013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSPPAT00000033836   ⟹   ENSPPAP00000011181
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl643,871,915 - 43,899,183 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000033844   ⟹   ENSPPAP00000011189
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl643,872,113 - 43,898,125 (+)Ensembl
RefSeq Acc Id: XM_003833272   ⟹   XP_003833320
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1643,871,939 - 43,899,183 (+)NCBI
Mhudiblu_PPA_v0642,576,759 - 42,604,609 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003833320 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_003833320   ⟸   XM_003833272
- Sequence:
RefSeq Acc Id: ENSPPAP00000011189   ⟸   ENSPPAT00000033844
RefSeq Acc Id: ENSPPAP00000011181   ⟸   ENSPPAT00000033836


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000028776 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSPPAP00000011181 ENTREZGENE, UniProtKB/TrEMBL
  ENSPPAP00000011189 UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000033836 UniProtKB/TrEMBL
  ENSPPAT00000033844 UniProtKB/TrEMBL
Gene3D-CATH 1.25.10.10 UniProtKB/TrEMBL
InterPro ARM-like UniProtKB/TrEMBL
  ARM-type_fold UniProtKB/TrEMBL
  PP2A_B56 UniProtKB/TrEMBL
NCBI Gene PPP2R5D ENTREZGENE
PANTHER PTHR10257 UniProtKB/TrEMBL
Pfam B56 UniProtKB/TrEMBL
PIRSF PP2A_B56 UniProtKB/TrEMBL
Superfamily-SCOP SSF48371 UniProtKB/TrEMBL
UniProt A0A2R9A2V0_PANPA UniProtKB/TrEMBL
  A0A2R9A724_PANPA UniProtKB/TrEMBL