LCP1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 14 | 45,180,206 - 45,266,387 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 13 | 36,234,410 - 36,320,594 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 13 | 26,820,846 - 26,906,916 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | |
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LCP1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 13 | 46,125,923 - 46,182,177 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 13 | 46,125,920 - 46,211,871 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 13 | 46,700,058 - 46,756,312 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 13 | 45,598,060 - 45,654,395 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 13 | 45,598,059 - 45,654,395 | NCBI | | | | | Celera | 13 | 27,755,067 - 27,811,461 (-) | NCBI | | Celera | | | Cytogenetic Map | 13 | q14.13 | NCBI | | | | | HuRef | 13 | 27,497,877 - 27,554,218 (-) | NCBI | | HuRef | | | CHM1_1 | 13 | 46,669,191 - 46,725,269 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 13 | 45,347,305 - 45,403,192 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Lcp1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 14 | 75,368,570 - 75,468,282 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 14 | 75,368,541 - 75,468,282 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 14 | 75,131,105 - 75,230,842 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 14 | 75,131,101 - 75,230,842 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 14 | 75,536,232 - 75,630,615 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 14 | 73,870,580 - 73,964,963 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 14 | 72,636,371 - 72,732,832 (+) | NCBI | | Celera | | | Cytogenetic Map | 14 | D3 | NCBI | | | | | cM Map | 14 | 39.63 | NCBI | | | | |
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Lcp1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 15 | 56,846,375 - 56,954,090 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 15 | 50,443,300 - 50,544,682 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 15 | 50,488,149 - 50,544,680 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 15 | 54,630,232 - 54,686,870 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 15 | 55,748,540 - 55,805,188 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 15 | 52,580,535 - 52,637,056 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 15 | 57,170,566 - 57,277,811 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 15 | 57,221,292 - 57,277,811 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 15 | 60,888,052 - 60,988,851 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 15 | 56,034,457 - 56,091,880 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 15 | 56,050,236 - 56,107,660 (+) | NCBI | | | | | Celera | 15 | 50,120,119 - 50,176,635 (+) | NCBI | | Celera | | | Cytogenetic Map | 15 | q11 | NCBI | | | | |
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Lcp1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955518 | 3,814,840 - 3,891,299 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955518 | 3,815,181 - 3,863,440 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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LCP1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 22 | 4,955,453 - 5,059,654 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 22 | 4,992,347 - 5,059,636 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 22 | 4,965,424 - 5,047,265 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 22 | 5,070,372 - 5,176,432 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 22 | 5,123,064 - 5,175,065 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 22 | 4,852,728 - 4,958,773 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 22 | 4,916,029 - 5,022,003 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 22 | 4,921,102 - 5,027,186 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Lcp1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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LCP1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 11 | 21,126,539 - 21,223,550 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 11 | 21,126,504 - 21,223,543 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 11 | 21,535,029 - 21,685,279 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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LCP1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 3 | 24,182,086 - 24,238,746 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 3 | 24,182,076 - 24,238,651 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666057 | 19,776,506 - 19,834,713 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Lcp1 (Heterocephalus glaber - naked mole-rat) |
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