ZNF707 (zinc finger protein 707) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: ZNF707 (zinc finger protein 707) Pan paniscus
Analyze
Symbol: ZNF707
Name: zinc finger protein 707
RGD ID: 11945392
Description: ENCODES a protein that exhibits metal ion binding (inferred); INVOLVED IN regulation of DNA-templated transcription (inferred); ASSOCIATED WITH genetic disease (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Rat
Chinchilla
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v27161,167,883 - 161,179,293 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan18136,684,981 - 136,696,563 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v08140,437,170 - 140,448,765 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.18143,451,966 - 143,462,051 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl8143,451,994 - 143,462,314 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
ZNF707
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v27161,167,883 - 161,179,293 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan18136,684,981 - 136,696,563 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v08140,437,170 - 140,448,765 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.18143,451,966 - 143,462,051 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl8143,451,994 - 143,462,314 (+)Ensemblpanpan1.1panPan2
ZNF707
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh388143,708,051 - 143,713,898 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl8143,684,452 - 143,713,898 (+)EnsemblGRCh38hg38GRCh38
GRCh378144,790,221 - 144,796,068 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 368144,838,610 - 144,849,543 (+)NCBINCBI36Build 36hg18NCBI36
Celera8141,077,613 - 141,088,543 (+)NCBICelera
Cytogenetic Map8q24.3NCBI
HuRef8140,042,991 - 140,048,894 (+)NCBIHuRef
CHM1_18144,830,237 - 144,836,112 (+)NCBICHM1_1
T2T-CHM13v2.08144,864,461 - 144,870,336 (+)NCBIT2T-CHM13v2.0
Zfp707l1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87109,531,227 - 109,542,044 (+)NCBIGRCr8
mRatBN7.27107,650,517 - 107,661,335 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7107,650,217 - 107,703,459 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx7109,389,806 - 109,400,661 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07111,613,484 - 111,624,339 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07111,559,563 - 111,570,438 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.07116,973,702 - 117,007,663 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7116,997,020 - 117,007,662 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07116,982,906 - 116,993,716 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47113,967,895 - 113,978,712 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera7104,007,422 - 104,018,240 (+)NCBICelera
Cytogenetic Map7q34NCBI
Znf707
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554542,377,306 - 2,387,449 (+)NCBIChiLan1.0ChiLan1.0
Znf707
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244053031,023,455 - 1,032,237 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049364708,449,554 - 8,458,330 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF707
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.18137,895,455 - 137,906,765 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl8137,901,513 - 137,905,923 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660391,973,526 - 1,985,912 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Znf707
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473513,083,303 - 13,094,773 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSPPAT00000051379   ⟹   ENSPPAP00000028532
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl8143,451,994 - 143,462,051 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000051383   ⟹   ENSPPAP00000028536
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl8143,452,270 - 143,462,314 (+)Ensembl
RefSeq Acc Id: XM_003819463   ⟹   XP_003819511
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v27161,167,887 - 161,179,293 (+)NCBI
NHGRI_mPanPan18136,684,986 - 136,696,165 (+)NCBI
Mhudiblu_PPA_v08140,437,193 - 140,448,765 (+)NCBI
PanPan1.18143,451,966 - 143,462,051 (+)NCBI
Sequence:
RefSeq Acc Id: XM_003819464   ⟹   XP_003819512
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v27161,167,887 - 161,179,293 (+)NCBI
NHGRI_mPanPan18136,684,986 - 136,696,563 (+)NCBI
Mhudiblu_PPA_v08140,437,193 - 140,447,809 (+)NCBI
PanPan1.18143,451,966 - 143,462,051 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008972788   ⟹   XP_008971036
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v27161,167,883 - 161,179,293 (+)NCBI
NHGRI_mPanPan18136,684,981 - 136,696,165 (+)NCBI
Mhudiblu_PPA_v08140,437,189 - 140,448,765 (+)NCBI
PanPan1.18143,451,986 - 143,462,051 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008972789   ⟹   XP_008971037
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v27161,167,883 - 161,179,293 (+)NCBI
NHGRI_mPanPan18136,684,981 - 136,696,165 (+)NCBI
Mhudiblu_PPA_v08140,437,189 - 140,448,765 (+)NCBI
PanPan1.18143,451,994 - 143,462,051 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008972791   ⟹   XP_008971039
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v27161,167,884 - 161,179,293 (+)NCBI
NHGRI_mPanPan18136,684,982 - 136,696,165 (+)NCBI
Mhudiblu_PPA_v08140,437,189 - 140,448,765 (+)NCBI
PanPan1.18143,451,979 - 143,462,051 (+)NCBI
Sequence:
RefSeq Acc Id: XM_034966816   ⟹   XP_034822707
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v27161,167,887 - 161,179,293 (+)NCBI
NHGRI_mPanPan18136,684,986 - 136,696,165 (+)NCBI
Mhudiblu_PPA_v08140,437,193 - 140,447,809 (+)NCBI
RefSeq Acc Id: XM_055116047   ⟹   XP_054972022
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v27161,167,887 - 161,179,293 (+)NCBI
NHGRI_mPanPan18136,684,986 - 136,696,165 (+)NCBI
RefSeq Acc Id: XM_063606485   ⟹   XP_063462555
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v27161,167,883 - 161,179,293 (+)NCBI
RefSeq Acc Id: XM_063606486   ⟹   XP_063462556
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v27161,167,883 - 161,179,293 (+)NCBI
RefSeq Acc Id: XM_063606487   ⟹   XP_063462557
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v27161,168,672 - 161,179,293 (+)NCBI
RefSeq Acc Id: XP_003819512   ⟸   XM_003819464
- Peptide Label: isoform X2
- UniProtKB: A0A2R9BJN4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_003819511   ⟸   XM_003819463
- Peptide Label: isoform X2
- UniProtKB: A0A2R9BJN4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008971039   ⟸   XM_008972791
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_008971036   ⟸   XM_008972788
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_008971037   ⟸   XM_008972789
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_034822707   ⟸   XM_034966816
- Peptide Label: isoform X2
- UniProtKB: A0A2R9BJN4 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSPPAP00000028532   ⟸   ENSPPAT00000051379
RefSeq Acc Id: ENSPPAP00000028536   ⟸   ENSPPAT00000051383
RefSeq Acc Id: XP_054972022   ⟸   XM_055116047
- Peptide Label: isoform X2
- UniProtKB: A0A2R9BJN4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063462556   ⟸   XM_063606486
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063462555   ⟸   XM_063606485
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063462557   ⟸   XM_063606487
- Peptide Label: isoform X1
Protein Domains
C2H2-type   KRAB


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000037301 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000051379.1 UniProtKB/TrEMBL
  ENSPPAT00000051383.1 UniProtKB/TrEMBL
Gene3D-CATH 6.10.140.140 UniProtKB/TrEMBL
  Classic Zinc Finger UniProtKB/TrEMBL
InterPro KRAB UniProtKB/TrEMBL
  KRAB_dom_sf UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/TrEMBL
KEGG Report pps:100976916 UniProtKB/TrEMBL
NCBI Gene ZNF707 ENTREZGENE
PANTHER KRAB DOMAIN C2H2 ZINC FINGER UniProtKB/TrEMBL
  KRAB DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
Pfam KRAB UniProtKB/TrEMBL
  zf-C2H2 UniProtKB/TrEMBL
PROSITE KRAB UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
SMART KRAB UniProtKB/TrEMBL
  ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP SSF109640 UniProtKB/TrEMBL
  SSF57667 UniProtKB/TrEMBL
UniProt A0A2R9BJN4 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9BPG5_PANPA UniProtKB/TrEMBL