SLC16A7 (solute carrier family 16 member 7) - Rat Genome Database

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Gene: SLC16A7 (solute carrier family 16 member 7) Pan paniscus
Analyze
Symbol: SLC16A7
Name: solute carrier family 16 member 7
RGD ID: 11942191
Description: ENCODES a protein that exhibits lactate transmembrane transporter activity (ortholog); pyruvate transmembrane transporter activity (ortholog); INVOLVED IN lactate transmembrane transport (ortholog); plasma membrane lactate transport (ortholog); pyruvate transmembrane transport (ortholog); ASSOCIATED WITH obesity (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: monocarboxylate transporter 2; solute carrier family 16, member 7 (monocarboxylic acid transporter 2)
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11229,390,576 - 29,587,897 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1229,390,576 - 29,528,851 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01229,128,600 - 29,317,797 (-)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
obesity  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References

Genomics

Comparative Map Data
SLC16A7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11229,390,576 - 29,587,897 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1229,390,576 - 29,528,851 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01229,128,600 - 29,317,797 (-)NCBIMhudiblu_PPA_v0panPan3
SLC16A7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1259,596,029 - 59,789,855 (+)EnsemblGRCh38hg38GRCh38
GRCh381259,595,934 - 59,789,841 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371259,989,810 - 60,183,622 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361258,369,393 - 58,461,675 (+)NCBINCBI36hg18NCBI36
Build 341258,369,392 - 58,461,674NCBI
Celera1259,745,720 - 59,838,012 (+)NCBI
Cytogenetic Map12q14.1NCBI
HuRef1257,038,268 - 57,232,240 (+)NCBIHuRef
CHM1_11259,958,039 - 60,151,803 (+)NCBICHM1_1
Slc16a7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3910125,055,139 - 125,225,455 (-)NCBIGRCm39mm39
GRCm39 Ensembl10125,055,139 - 125,225,334 (-)Ensembl
GRCm3810125,219,270 - 125,389,586 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl10125,219,270 - 125,389,465 (-)EnsemblGRCm38mm10GRCm38
MGSCv3710124,664,541 - 124,765,591 (-)NCBIGRCm37mm9NCBIm37
MGSCv3610124,630,545 - 124,731,595 (-)NCBImm8
Celera10127,630,780 - 127,731,940 (-)NCBICelera
Cytogenetic Map10D3NCBI
Slc16a7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2761,043,667 - 61,211,547 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl761,051,167 - 61,154,994 (-)Ensembl
Rnor_6.0768,438,341 - 68,606,312 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl768,446,193 - 68,549,763 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0768,633,417 - 68,801,189 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4765,210,148 - 65,313,572 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1765,230,721 - 65,390,741 (-)NCBI
Celera758,206,868 - 58,309,915 (-)NCBICelera
Cytogenetic Map7q22NCBI
Slc16a7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554587,232,886 - 7,352,782 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554587,232,886 - 7,352,782 (+)NCBIChiLan1.0ChiLan1.0
SLC16A7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1103,333,000 - 3,500,684 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl103,334,126 - 3,496,150 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha103,398,668 - 3,564,721 (+)NCBI
ROS_Cfam_1.0103,356,472 - 3,522,599 (+)NCBI
UMICH_Zoey_3.1103,323,639 - 3,489,625 (+)NCBI
UNSW_CanFamBas_1.0103,565,685 - 3,731,591 (+)NCBI
UU_Cfam_GSD_1.0103,691,746 - 3,857,780 (+)NCBI
Slc16a7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494555,219,046 - 55,388,105 (-)NCBI
SpeTri2.0NW_0049366463,482,148 - 3,647,466 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC16A7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl524,713,267 - 24,875,003 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1524,713,009 - 24,871,891 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2526,710,139 - 26,864,757 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SLC16A7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11155,541,313 - 55,709,102 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl1155,645,129 - 55,708,356 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666037190,169,996 - 190,345,973 (-)NCBIVero_WHO_p1.0
Slc16a7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248028,015,061 - 8,191,031 (-)NCBIHetGla_female_1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000047164   ⟹   ENSPPAP00000024339
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1229,390,576 - 29,494,835 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000047169   ⟹   ENSPPAP00000024344
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1229,397,813 - 29,528,851 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000047171   ⟹   ENSPPAP00000024346
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1229,397,813 - 29,519,133 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000047172   ⟹   ENSPPAP00000024347
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1229,397,813 - 29,494,835 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000047173   ⟹   ENSPPAP00000024348
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1229,460,753 - 29,479,125 (-)Ensembl
RefSeq Acc Id: XM_003824821   ⟹   XP_003824869
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.11229,397,807 - 29,494,576 (-)NCBI
Mhudiblu_PPA_v01229,128,600 - 29,224,430 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008978459   ⟹   XP_008976707
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.11229,397,807 - 29,587,897 (-)NCBI
Mhudiblu_PPA_v01229,128,600 - 29,317,797 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008978460   ⟹   XP_008976708
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.11229,397,807 - 29,519,133 (-)NCBI
Mhudiblu_PPA_v01229,128,600 - 29,248,942 (-)NCBI
Sequence:
RefSeq Acc Id: XM_034935540   ⟹   XP_034791431
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01229,128,600 - 29,308,185 (-)NCBI
Protein Sequences
Protein RefSeqs XP_003824869 (Get FASTA)   NCBI Sequence Viewer  
  XP_008976707 (Get FASTA)   NCBI Sequence Viewer  
  XP_008976708 (Get FASTA)   NCBI Sequence Viewer  
  XP_034791431 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_008976707   ⟸   XM_008978459
- Sequence:
RefSeq Acc Id: XP_008976708   ⟸   XM_008978460
- Sequence:
RefSeq Acc Id: XP_003824869   ⟸   XM_003824821
- Sequence:
RefSeq Acc Id: XP_034791431   ⟸   XM_034935540
RefSeq Acc Id: ENSPPAP00000024339   ⟸   ENSPPAT00000047164
RefSeq Acc Id: ENSPPAP00000024344   ⟸   ENSPPAT00000047169
RefSeq Acc Id: ENSPPAP00000024346   ⟸   ENSPPAT00000047171
RefSeq Acc Id: ENSPPAP00000024348   ⟸   ENSPPAT00000047173
RefSeq Acc Id: ENSPPAP00000024347   ⟸   ENSPPAT00000047172


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000035323 Ensembl, ENTREZGENE
NCBI Gene SLC16A7 ENTREZGENE