FSIP2 (fibrous sheath interacting protein 2) - Rat Genome Database

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Gene: FSIP2 (fibrous sheath interacting protein 2) Pan paniscus
Analyze
Symbol: FSIP2
Name: fibrous sheath interacting protein 2
RGD ID: 11941196
Description: INVOLVED IN flagellated sperm motility (ortholog); protein localization to cilium (ortholog); sperm axoneme assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); long QT syndrome (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN sperm connecting piece (inferred); sperm end piece (inferred); sperm midpiece (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: fibrous sheath-interacting protein 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21388,402,843 - 88,502,342 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B88,417,823 - 88,517,322 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B73,019,091 - 73,112,974 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B190,821,633 - 190,915,433 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B190,864,813 - 190,915,369 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
FSIP2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21388,402,843 - 88,502,342 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B88,417,823 - 88,517,322 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B73,019,091 - 73,112,974 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B190,821,633 - 190,915,433 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B190,864,813 - 190,915,369 (+)Ensemblpanpan1.1panPan2
FSIP2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382185,737,134 - 185,833,290 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2185,738,804 - 185,833,290 (+)EnsemblGRCh38hg38GRCh38
GRCh372186,603,531 - 186,698,017 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362186,378,006 - 186,406,262 (+)NCBINCBI36Build 36hg18NCBI36
Build 342186,435,772 - 186,456,782RGD
Celera2180,199,128 - 180,293,792 (+)NCBICelera
Cytogenetic Map2q32.1NCBI
HuRef2178,463,445 - 178,558,017 (+)NCBIHuRef
CHM1_12186,609,231 - 186,703,883 (+)NCBICHM1_1
T2T-CHM13v2.02186,226,199 - 186,322,363 (+)NCBIT2T-CHM13v2.0
Fsip2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39282,773,978 - 82,839,281 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl282,773,978 - 82,839,281 (+)EnsemblGRCm39 Ensembl
GRCm38282,943,634 - 83,008,937 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl282,943,634 - 83,008,937 (+)EnsemblGRCm38mm10GRCm38
MGSCv37282,783,797 - 82,849,094 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36282,775,717 - 82,809,716 (+)NCBIMGSCv36mm8
Celera284,586,210 - 84,651,534 (+)NCBICelera
Cytogenetic Map2DNCBI
cM Map249.08NCBI
Fsip2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8388,369,218 - 88,439,756 (+)NCBIGRCr8
mRatBN7.2367,962,345 - 68,032,866 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl367,962,360 - 68,032,868 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0370,285,181 - 70,356,568 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl370,285,219 - 70,356,568 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0376,820,189 - 76,892,139 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4366,015,429 - 66,068,760 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera367,361,512 - 67,431,121 (+)NCBICelera
Cytogenetic Map3q24NCBI
Fsip2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540312,261,208 - 12,334,754 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540312,261,233 - 12,334,754 (-)NCBIChiLan1.0ChiLan1.0
FSIP2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13628,196,668 - 28,271,660 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3628,196,493 - 28,271,662 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3628,093,889 - 28,168,700 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03628,422,463 - 28,497,082 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3628,422,370 - 28,497,175 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13628,477,094 - 28,554,724 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03628,411,024 - 28,485,830 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03628,583,085 - 28,657,938 (+)NCBIUU_Cfam_GSD_1.0
Fsip2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303145,316,975 - 145,398,264 (+)NCBIHiC_Itri_2
SpeTri2.0NW_00493650611,439,867 - 11,521,025 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FSIP2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1590,901,868 - 91,001,297 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11590,902,067 - 91,000,873 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215100,859,189 - 100,943,212 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FSIP2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11071,304,678 - 71,397,762 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1071,305,374 - 71,397,698 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040128,109,852 - 128,202,711 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000032203   ⟹   ENSPPAP00000009560
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2B190,864,813 - 190,915,369 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000032205   ⟹   ENSPPAP00000009562
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2B190,888,861 - 190,893,349 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000032206   ⟹   ENSPPAP00000009563
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2B190,888,861 - 190,890,931 (+)Ensembl
RefSeq Acc Id: XM_034954621   ⟹   XP_034810512
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21388,402,843 - 88,502,342 (+)NCBI
NHGRI_mPanPan12B88,417,823 - 88,517,322 (+)NCBI
Mhudiblu_PPA_v02B73,019,091 - 73,112,974 (+)NCBI
RefSeq Acc Id: XM_055108840   ⟹   XP_054964815
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21388,402,843 - 88,502,342 (+)NCBI
NHGRI_mPanPan12B88,417,823 - 88,517,322 (+)NCBI
Protein Sequences
Protein RefSeqs XP_034810512 (Get FASTA)   NCBI Sequence Viewer  
  XP_054964815 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000009560.1
  ENSPPAP00000009562.1
  ENSPPAP00000009563.1
Reference Protein Sequences
RefSeq Acc Id: XP_034810512   ⟸   XM_034954621
- Peptide Label: isoform X2
- UniProtKB: A0A2R8ZX52 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSPPAP00000009562   ⟸   ENSPPAT00000032205
RefSeq Acc Id: ENSPPAP00000009560   ⟸   ENSPPAT00000032203
RefSeq Acc Id: ENSPPAP00000009563   ⟸   ENSPPAT00000032206
RefSeq Acc Id: XP_054964815   ⟸   XM_055108840
- Peptide Label: isoform X1
- UniProtKB: A0A2R8ZX52 (UniProtKB/TrEMBL)
Protein Domains
Fibrous sheath-interacting protein 2 C-terminal


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000028009 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000032203.1 UniProtKB/TrEMBL
  ENSPPAT00000032205.1 UniProtKB/TrEMBL
  ENSPPAT00000032206.1 UniProtKB/TrEMBL
InterPro FSIP2 UniProtKB/TrEMBL
  FSIP2_C UniProtKB/TrEMBL
NCBI Gene FSIP2 ENTREZGENE
PANTHER FIBROUS SHEATH INTERACTING PROTEIN 2 UniProtKB/TrEMBL
  PTHR47315 UniProtKB/TrEMBL
Pfam FSIP2 UniProtKB/TrEMBL
UniProt A0A2R8ZX52 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R8ZYB2_PANPA UniProtKB/TrEMBL
  A0A2R9A0W8_PANPA UniProtKB/TrEMBL