IPO11 (importin 11) - Rat Genome Database

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Gene: IPO11 (importin 11) Pan paniscus
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Symbol: IPO11
Name: importin 11
RGD ID: 11939485
Description: ENCODES a protein that exhibits nuclear import signal receptor activity (inferred); small GTPase binding (inferred); INVOLVED IN intracellular protein transport (inferred); protein import into nucleus (inferred); ribosomal protein import into nucleus (inferred); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred); nuclear envelope (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: importin-11
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2451,287,365 - 51,499,916 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1549,440,997 - 49,653,546 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0551,370,503 - 51,584,256 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1553,013,430 - 53,226,598 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl553,013,430 - 53,226,598 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
IPO11
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2451,287,365 - 51,499,916 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1549,440,997 - 49,653,546 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0551,370,503 - 51,584,256 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1553,013,430 - 53,226,598 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl553,013,430 - 53,226,598 (-)Ensemblpanpan1.1panPan2
IPO11
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38562,578,735 - 62,628,589 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl562,403,972 - 62,628,582 (+)EnsemblGRCh38hg38GRCh38
GRCh37561,874,562 - 61,924,416 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36561,744,351 - 61,960,165 (+)NCBINCBI36Build 36hg18NCBI36
Build 34561,744,350 - 61,960,164NCBI
Celera558,704,531 - 58,921,350 (+)NCBICelera
Cytogenetic Map5q12.1NCBI
HuRef558,830,947 - 58,880,547 (+)NCBIHuRef
CHM1_1561,874,345 - 61,924,070 (+)NCBICHM1_1
T2T-CHM13v2.0563,398,374 - 63,448,302 (+)NCBIT2T-CHM13v2.0
Ipo11-lrrc70
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3913106,930,947 - 106,972,810 (-)NCBIGRCm39GRCm39mm39
GRCm3813106,794,439 - 106,836,302 (-)NCBIGRCm38GRCm38mm10GRCm38
Cytogenetic Map13D1NCBI
Ipo11
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8239,903,316 - 40,076,485 (-)NCBIGRCr8
mRatBN7.2238,169,688 - 38,342,929 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.0237,952,982 - 38,120,451 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl237,954,161 - 38,110,567 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0257,049,753 - 57,215,181 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4238,006,409 - 38,054,430 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1237,926,777 - 37,974,871 (-)NCBI
Celera234,041,416 - 34,210,706 (-)NCBICelera
Cytogenetic Map2q13NCBI
Ipo11
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554466,034,277 - 6,225,640 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554466,034,277 - 6,225,627 (-)NCBIChiLan1.0ChiLan1.0
Ipo11
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213197,168,763 - 197,374,904 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364806,104,333 - 6,304,413 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364806,105,237 - 6,311,335 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IPO11
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1458,602,143 - 58,827,120 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660497,121,956 - 7,352,145 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ipo11
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248157,254,909 - 7,478,569 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248157,255,803 - 7,492,289 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSPPAT00000062029   ⟹   ENSPPAP00000039120
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl553,013,430 - 53,226,598 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000062033   ⟹   ENSPPAP00000039124
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl553,016,064 - 53,219,999 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000062040   ⟹   ENSPPAP00000039131
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl553,016,064 - 53,201,972 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000062045   ⟹   ENSPPAP00000039136
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl553,064,700 - 53,082,228 (-)Ensembl
RefSeq Acc Id: XM_003827413   ⟹   XP_003827461
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2451,287,365 - 51,499,916 (-)NCBI
NHGRI_mPanPan1549,440,997 - 49,653,546 (-)NCBI
Mhudiblu_PPA_v0551,370,503 - 51,584,256 (-)NCBI
PanPan1.1553,013,430 - 53,226,598 (-)NCBI
Sequence:
RefSeq Acc Id: XM_063604439   ⟹   XP_063460509
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2451,287,365 - 51,475,664 (-)NCBI
Protein Sequences
Protein RefSeqs XP_003827461 (Get FASTA)   NCBI Sequence Viewer  
  XP_063460509 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000039120.1
  ENSPPAP00000039124.1
  ENSPPAP00000039131.1
  ENSPPAP00000039136.1
RefSeq Acc Id: XP_003827461   ⟸   XM_003827413
- Peptide Label: isoform X1
- UniProtKB: A0A2R9CB02 (UniProtKB/TrEMBL),   A0A2R9CB22 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSPPAP00000039124   ⟸   ENSPPAT00000062033
RefSeq Acc Id: ENSPPAP00000039120   ⟸   ENSPPAT00000062029
RefSeq Acc Id: ENSPPAP00000039131   ⟸   ENSPPAT00000062040
RefSeq Acc Id: ENSPPAP00000039136   ⟸   ENSPPAT00000062045
RefSeq Acc Id: XP_063460509   ⟸   XM_063604439
- Peptide Label: isoform X2
Protein Domains
Importin N-terminal


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000042249 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000062029.1 UniProtKB/TrEMBL
  ENSPPAT00000062033.1 UniProtKB/TrEMBL
  ENSPPAT00000062040.1 UniProtKB/TrEMBL
  ENSPPAT00000062045.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.10.10 UniProtKB/TrEMBL
InterPro ARM-like UniProtKB/TrEMBL
  ARM-type_fold UniProtKB/TrEMBL
  Importin-beta_N UniProtKB/TrEMBL
KEGG Report pps:100977085 UniProtKB/TrEMBL
NCBI Gene IPO11 ENTREZGENE
PANTHER IMPORTIN-11 UniProtKB/TrEMBL
  IMPORTIN-7, 8, 11 UniProtKB/TrEMBL
Pfam IBN_N UniProtKB/TrEMBL
PROSITE IMPORTIN_B_NT UniProtKB/TrEMBL
SMART IBN_N UniProtKB/TrEMBL
Superfamily-SCOP SSF48371 UniProtKB/TrEMBL
UniProt A0A2R9CB02 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9CB22 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9CB29_PANPA UniProtKB/TrEMBL
  A0A2R9CB67_PANPA UniProtKB/TrEMBL