KLHDC8B (kelch domain containing 8B) - Rat Genome Database
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Gene: KLHDC8B (kelch domain containing 8B) Pan paniscus
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Symbol: KLHDC8B
Name: kelch domain containing 8B
RGD ID: 11933821
Description: INVOLVED IN mitotic cytokinetic process (ortholog); mitotic nuclear division (ortholog); nuclear chromosome segregation (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2P (ortholog); Hodgkin's lymphoma (ortholog); FOUND IN cellularization cleavage furrow (ortholog); cytoplasm (ortholog); cytosol (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: kelch domain-containing protein 8B
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1350,173,894 - 50,179,759 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl350,174,393 - 50,179,759 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0349,094,203 - 49,099,818 (+)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References

Genomics

Comparative Map Data
KLHDC8B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1350,173,894 - 50,179,759 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl350,174,393 - 50,179,759 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0349,094,203 - 49,099,818 (+)NCBIMhudiblu_PPA_v0panPan3
KLHDC8B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl349,171,598 - 49,176,486 (+)EnsemblGRCh38hg38GRCh38
GRCh38349,171,120 - 49,176,487 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37349,209,031 - 49,213,919 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36349,184,072 - 49,188,923 (+)NCBINCBI36hg18NCBI36
Celera349,166,287 - 49,171,188 (+)NCBI
Cytogenetic Map3p21.31NCBI
HuRef349,266,977 - 49,271,878 (+)NCBIHuRef
CHM1_1349,161,789 - 49,166,690 (+)NCBICHM1_1
Klhdc8b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399108,324,834 - 108,338,780 (-)NCBIGRCm39mm39
GRCm39 Ensembl9108,324,835 - 108,338,780 (-)Ensembl
GRCm389108,447,635 - 108,461,581 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9108,447,636 - 108,461,581 (-)EnsemblGRCm38mm10GRCm38
MGSCv379108,349,970 - 108,363,912 (-)NCBIGRCm37mm9NCBIm37
MGSCv369108,305,742 - 108,319,684 (-)NCBImm8
Celera9108,056,827 - 108,070,762 (-)NCBICelera
Cytogenetic Map9F2NCBI
Klhdc8b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.28109,141,594 - 109,146,584 (-)NCBI
Rnor_6.0 Ensembl8117,231,769 - 117,237,229 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.08117,232,047 - 117,236,792 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.08116,576,621 - 116,581,366 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera8108,442,391 - 108,447,071 (-)NCBICelera
Cytogenetic Map8q32NCBI
Klhdc8b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555321,158,162 - 1,163,305 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555321,158,888 - 1,162,710 (+)NCBIChiLan1.0ChiLan1.0
KLHDC8B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2040,023,411 - 40,026,552 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12040,012,797 - 40,027,888 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Klhdc8b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_004936529863,052 - 872,067 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KLHDC8B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1331,775,694 - 31,780,484 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11331,775,339 - 31,780,483 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21335,005,885 - 35,011,029 (+)NCBISscrofa10.2Sscrofa10.2susScr3
KLHDC8B
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12210,573,720 - 10,578,629 (+)NCBI
ChlSab1.1 Ensembl2210,574,769 - 10,578,674 (+)Ensembl
Klhdc8b
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247303,182,881 - 3,187,714 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000065195   ⟹   ENSPPAP00000042265
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl350,174,393 - 50,179,759 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000065196   ⟹   ENSPPAP00000042266
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl350,176,042 - 50,179,074 (+)Ensembl
RefSeq Acc Id: XM_003818375   ⟹   XP_003818423
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1350,174,393 - 50,179,759 (+)NCBI
Mhudiblu_PPA_v0349,094,420 - 49,099,818 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008971662   ⟹   XP_008969910
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1350,173,894 - 50,179,759 (+)NCBI
Mhudiblu_PPA_v0349,094,203 - 49,099,818 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003818423 (Get FASTA)   NCBI Sequence Viewer  
  XP_008969910 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_008969910   ⟸   XM_008971662
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_003818423   ⟸   XM_003818375
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: ENSPPAP00000042266   ⟸   ENSPPAT00000065196
RefSeq Acc Id: ENSPPAP00000042265   ⟸   ENSPPAT00000065195


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000043715 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSPPAP00000042265 ENTREZGENE, UniProtKB/TrEMBL
  ENSPPAP00000042266 UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000065195 UniProtKB/TrEMBL
  ENSPPAT00000065196 UniProtKB/TrEMBL
Gene3D-CATH 2.120.10.80 UniProtKB/TrEMBL
InterPro Gal_Oxase/kelch_b-propeller UniProtKB/TrEMBL
  Kelch-typ_b-propeller UniProtKB/TrEMBL
  Kelch_1 UniProtKB/TrEMBL
KEGG Report pps:100968949 UniProtKB/TrEMBL
NCBI Gene KLHDC8B ENTREZGENE
Pfam Kelch_1 UniProtKB/TrEMBL
SMART Kelch UniProtKB/TrEMBL
Superfamily-SCOP SSF117281 UniProtKB/TrEMBL
  SSF50965 UniProtKB/TrEMBL
UniProt A0A2R9CJX5_PANPA UniProtKB/TrEMBL
  A0A2R9CJX7_PANPA UniProtKB/TrEMBL