LOC100995491 (cystatin-13-like) - Rat Genome Database

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Gene: LOC100995491 (cystatin-13-like) Pan paniscus
Analyze
Symbol: LOC100995491
Name: cystatin-13-like
RGD ID: 11926711
Description: ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22124,396,460 - 24,422,111 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12024,393,293 - 24,418,939 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02023,467,699 - 23,490,571 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12023,818,360 - 23,841,240 (+)NCBIpanpan1.1PanPan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_003829368   ⟹   XP_003829416
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22124,396,460 - 24,422,111 (+)NCBI
NHGRI_mPanPan12024,393,293 - 24,418,939 (+)NCBI
Mhudiblu_PPA_v02023,467,699 - 23,490,571 (+)NCBI
PanPan1.12023,818,360 - 23,841,240 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008954732   ⟹   XP_008952980
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22124,399,214 - 24,422,111 (+)NCBI
NHGRI_mPanPan12024,396,047 - 24,418,939 (+)NCBI
Mhudiblu_PPA_v02023,467,699 - 23,490,571 (+)NCBI
PanPan1.12023,818,360 - 23,841,240 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008954733   ⟹   XP_008952981
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22124,399,214 - 24,422,111 (+)NCBI
NHGRI_mPanPan12024,396,047 - 24,418,939 (+)NCBI
Mhudiblu_PPA_v02023,467,699 - 23,490,544 (+)NCBI
PanPan1.12023,818,360 - 23,841,235 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024926906   ⟹   XP_024782674
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22124,399,247 - 24,422,111 (+)NCBI
NHGRI_mPanPan12024,396,080 - 24,418,939 (+)NCBI
Mhudiblu_PPA_v02023,467,699 - 23,490,544 (+)NCBI
PanPan1.12023,818,360 - 23,841,235 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003829416 (Get FASTA)   NCBI Sequence Viewer  
  XP_008952980 (Get FASTA)   NCBI Sequence Viewer  
  XP_008952981 (Get FASTA)   NCBI Sequence Viewer  
  XP_024782674 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000033085.1
Reference Protein Sequences
RefSeq Acc Id: XP_008952980   ⟸   XM_008954732
- Sequence:
RefSeq Acc Id: XP_003829416   ⟸   XM_003829368
- Sequence:
RefSeq Acc Id: XP_008952981   ⟸   XM_008954733
- Sequence:
RefSeq Acc Id: XP_024782674   ⟸   XM_024926906
- Sequence:
Protein Domains
Cystatin


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000039408 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000055955.1 UniProtKB/TrEMBL
Gene3D-CATH 3.10.450.10 UniProtKB/TrEMBL
InterPro Cystatin_dom UniProtKB/TrEMBL
  Cystatin_sf UniProtKB/TrEMBL
KEGG Report pps:100995491 UniProtKB/TrEMBL
NCBI Gene LOC100995491 ENTREZGENE
PANTHER CYSTATIN-13 UniProtKB/TrEMBL
  CYSTATIN-8-RELATED UniProtKB/TrEMBL
Pfam Cystatin UniProtKB/TrEMBL
SMART SM00043 UniProtKB/TrEMBL
Superfamily-SCOP SSF54403 UniProtKB/TrEMBL
UniProt A0A2R9BX88_PANPA UniProtKB/TrEMBL