PALM3 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 20 | 18,982,757 - 18,987,330 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 19 | 17,983,739 - 17,988,277 (-) | NCBI | | NHGRI_mPanPan1 | | | PanPan1.1 | 19 | 14,344,108 - 14,352,958 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 19 | 14,344,347 - 14,350,074 (-) | Ensembl | panpan1.1 | | panPan2 | |
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PALM3 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 19 | 14,053,367 - 14,062,076 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 19 | 14,053,363 - 14,062,076 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 19 | 14,164,179 - 14,172,888 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 19 | 14,025,179 - 14,030,971 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 19 | 14,057,978 - 14,063,772 (-) | NCBI | | Celera | | | Cytogenetic Map | 19 | p13.12 | NCBI | | | | | HuRef | 19 | 13,736,234 - 13,742,106 (-) | NCBI | | HuRef | | | CHM1_1 | 19 | 14,164,770 - 14,170,545 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 19 | 14,179,657 - 14,188,366 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Palm3 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 8 | 84,747,787 - 84,757,300 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 8 | 84,748,100 - 84,756,924 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 8 | 84,021,157 - 84,030,671 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 8 | 84,021,471 - 84,030,295 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 8 | 86,545,373 - 86,554,194 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 8 | 86,911,579 - 86,920,170 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 8 | 88,314,557 - 88,323,370 (+) | NCBI | | Celera | | | Cytogenetic Map | 8 | C2 | NCBI | | | | | cM Map | 8 | 40.25 | NCBI | | | | |
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Palm3 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 19 | 41,026,757 - 41,035,217 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 19 | 24,121,984 - 24,126,079 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 19 | 24,122,239 - 24,130,448 (-) | Ensembl | | mRatBN7.2 Ensembl | | | Rnor_6.0 | 19 | 25,143,464 - 25,152,275 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 19 | 25,143,428 - 25,151,891 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 19 | 36,120,355 - 36,128,818 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 19 | 25,807,363 - 25,815,718 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 19 | 23,669,466 - 23,678,277 (-) | NCBI | | Celera | | | Cytogenetic Map | 19 | q11 | NCBI | | | | |
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Palm3 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955415 | 32,762,851 - 32,771,409 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955415 | 32,762,631 - 32,772,809 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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PALM3 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 20 | 48,452,778 - 48,456,625 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 20 | 48,452,772 - 48,456,397 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 20 | 48,321,945 - 48,330,812 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 20 | 48,965,418 - 48,974,303 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 20 | 48,965,333 - 48,974,075 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 20 | 48,176,366 - 48,185,227 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 20 | 48,603,181 - 48,612,053 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 20 | 48,845,756 - 48,854,626 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Palm3 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405118 | 207,625,347 - 207,634,097 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936659 | 2,719,674 - 2,725,635 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936659 | 2,720,609 - 2,729,221 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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PALM3 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 2 | 65,117,290 - 65,126,887 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 2 | 65,117,176 - 65,127,136 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 2 | 65,391,338 - 65,401,274 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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PALM3 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 6 | 12,699,704 - 12,707,470 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 6 | 12,699,942 - 12,708,737 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666074 | 6,946,064 - 6,950,411 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Palm3 (Heterocephalus glaber - naked mole-rat) |
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