TMEM128 (transmembrane protein 128)

Gene: TMEM128 (transmembrane protein 128) Pan paniscus

Analyze

Symbol:

TMEM128

Name:

transmembrane protein 128

RGD ID:

11920142

Description:

ASSOCIATED WITH Ellis-Van Creveld syndrome (ortholog); genetic disease (ortholog); FOUND IN membrane (inferred)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	3	4,502,391 - 4,515,466 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	4	4,435,314 - 4,448,390 (-)	NCBI		NHGRI_mPanPan1
PanPan1.1	4	4,316,181 - 4,328,850 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	4	4,316,181 - 4,328,850 (-)	Ensembl	panpan1.1		panPan2

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Ellis-Van Creveld syndrome (ISO)

genetic disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

membrane (IEA)

Molecular Function

protein binding (ISO)

References

Genomics

Comparative Map Data

TMEM128
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	3	4,502,391 - 4,515,466 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	4	4,435,314 - 4,448,390 (-)	NCBI		NHGRI_mPanPan1
PanPan1.1	4	4,316,181 - 4,328,850 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	4	4,316,181 - 4,328,850 (-)	Ensembl	panpan1.1		panPan2

TMEM128
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	4	4,235,542 - 4,248,223 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	4	4,235,542 - 4,248,223 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	4	4,237,269 - 4,249,950 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	4	4,288,170 - 4,300,835 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	4	4,134,889 - 4,147,554 (-)	NCBI		Celera
Cytogenetic Map	4	p16.3	NCBI
HuRef	4	4,172,956 - 4,185,622 (-)	NCBI		HuRef
CHM1_1	4	4,234,947 - 4,247,612 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	4	4,204,964 - 4,217,644 (-)	NCBI		T2T-CHM13v2.0

Tmem128
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	38,417,529 - 38,426,978 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	38,417,529 - 38,426,978 (+)	Ensembl		GRCm39 Ensembl
GRCm38	5	38,260,185 - 38,269,634 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	38,260,185 - 38,269,634 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	38,651,614 - 38,660,857 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	38,548,624 - 38,557,867 (+)	NCBI		MGSCv36	mm8
Celera	5	35,710,138 - 35,719,361 (+)	NCBI		Celera
Cytogenetic Map	5	B3	NCBI
cM Map	5	20.33	NCBI

Tmem128
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	14	76,751,848 - 76,761,576 (-)	NCBI		GRCr8
mRatBN7.2	14	72,539,530 - 72,548,623 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	14	72,539,532 - 72,548,550 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	14	76,981,207 - 76,990,209 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	14	78,222,089 - 78,231,087 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	14	74,662,152 - 74,671,153 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	14	77,270,794 - 77,279,979 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	14	77,270,811 - 77,279,831 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	14	77,252,257 - 77,261,446 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	14	77,819,031 - 77,828,030 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	14	77,821,666 - 77,830,432 (-)	NCBI
Celera	14	71,490,759 - 71,499,757 (-)	NCBI		Celera
Cytogenetic Map	14	q21	NCBI

Tmem128
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955514	5,389,521 - 5,398,789 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955514	5,390,372 - 5,397,209 (+)	NCBI	ChiLan1.0	ChiLan1.0

TMEM128
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	3	69,688,940 - 69,699,316 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	3	69,689,284 - 69,699,269 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	3	72,240,928 - 72,251,307 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	3	70,445,868 - 70,456,252 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	3	70,446,213 - 70,456,203 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	3	69,719,983 - 69,730,366 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	3	69,885,118 - 69,895,505 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	3	70,266,495 - 70,276,871 (-)	NCBI		UU_Cfam_GSD_1.0

Tmem128
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405285	63,210,386 - 63,221,091 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936477	16,911,813 - 16,922,770 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936477	16,912,070 - 16,922,788 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TMEM128
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	8	6,115,002 - 6,125,139 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	8	6,114,992 - 6,125,139 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	8	5,751,463 - 5,761,776 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TMEM128
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	27	40,339,816 - 40,353,037 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	27	40,337,425 - 40,352,986 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666047	87,135,642 - 87,150,133 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tmem128
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624755	21,412,381 - 21,421,175 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624755	21,412,437 - 21,421,084 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003816486	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_003816487	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008969543	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSPPAT00000040848 ⟹ ENSPPAP00000018119

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	4	4,316,181 - 4,328,850 (-)	Ensembl

RefSeq Acc Id:

ENSPPAT00000040853 ⟹ ENSPPAP00000018124

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	4	4,316,926 - 4,328,845 (-)	Ensembl

RefSeq Acc Id:

XM_003816486 ⟹ XP_003816534

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	4,502,391 - 4,515,466 (-)	NCBI
NHGRI_mPanPan1	4	4,435,314 - 4,448,390 (-)	NCBI
PanPan1.1	4	4,316,181 - 4,328,845 (-)	NCBI

Sequence:

show sequence

ACGTCACTTCCGTCGCATTTCGGGGCGGTACCAAGATGGACTCTTCGCGGGCCCGGCAGCAGCT
CCGGCGGCGATTCCTCCTCCTGCCGGACGCCGAGGCCCAGCTGGACCGCGAGGGTGACGCCGGG
CCGGAAACCTCTGCAGCTGTTGAGAAAAAGGAGAAACCTCTTCCAAGACTTAATATCCATTCTG
GATTCTGGATTTTGGCATCCATTGTTGTGACCTATTATGTTGACTTCTTTAAAACCCTTAAAGA
AAACTTCCACACTAGCAGCTGGTTTCTCTGTGGCAGTGCCTTGTTGCTTGTCAGTTTATCAATT
GCATTTTACTGCATAGTCTACCTGGAATGGTATTGTGGAATTGGAGAATATGATGTCACGTATC
CGGCCTTGATACCCATTACCACTGCCTCCTTTATTGCAGCAGGAATTTGCTTCAACATTGCTTT
ATGGCATGTGTGGTCGTTTTTCACTCCATTGTTGTTGTTTACCCAGTTTATGGGGGTTGTAATG
TTTATCACACTCCTTGGATGATTTCCGAAGACACAGGGTCTTCTATGTTGCCCAGGCTGTCTTT
GAACTCCTGGGATCAAGTGATCCTCCTGCCTCAGCCTTCGAAGTAGTTGGGACTACAGGCCCAC
GCCACCGTGCCTGGCTGGACATGTAAATTTGAAGTGAGTGGTTAAACATCCAGCTAGCTGAAAG
CATGGCAGACCCTAACAGAAAAGCTACAGTGTGTTTTTGCAACTGTGAAGTGAATGGCTTCCTG
GGAAAAATTGTGACTTTGTATAACTATTGTTGAAACCAGAATAAATTATATTTCACTTGCATAT
GCTTAAATTATTAAAATTTTCAGAAGTCAGTGATACAGAAATACTATTTTGCAATGTTAATCTG
TTTGAGTCTTTGGAGAAAGTGGTTTCATTATAGGTACATAGTGCACTGTTAATATTTTAAACAA
ATAGTTCACTCTTCCATTTAAGGGATAGCAGTTCCTTGTATAAAATGACTGGATGTGTATAAAG
GAATTATGTTGTCATGTGCCTTTAACCAGCTTTAGTAATTACTATAATCTCATATTTATGATAG
TTTTGTTAGGTGACAGGACCAAATGAAAACATTTTATGTTTTCTCATCACTTTAGATTTTATCA
TTATGTACATTACTGGGTTTTTAGCATTTCCTAATGTGAAGTTTTAATCACTTTTAAGTATACA
TTTTTTTCTGTATCATTTAAATAAAATATCTTTATAACTTT

hide sequence

RefSeq Acc Id:

XM_008969543 ⟹ XP_008967791

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	4,502,391 - 4,515,466 (-)	NCBI
NHGRI_mPanPan1	4	4,435,314 - 4,448,390 (-)	NCBI
PanPan1.1	4	4,316,181 - 4,328,850 (-)	NCBI

Sequence:

show sequence

GTCTGACGTCACTTCCGTCGCATTTCGGGGCGGTACCAAGATGGACTCTTCGCGGGCCCGGCAG
CAGCTCCGGCGGCGATTCCTCCTCCTGCCGGACGCCGAGGCCCAGCTGGACCGCGAGGGTGACG
CCGGGCCGGGTGAGGCGCGCACCAAGCCGCCCCGAGGTTCTCAGAGGCGAGGCGTCGGAAAACG
GCCGGCCTCCGGCAGCCCTGGCCCAGTCTGGAAGGACTGAGTTTCGGCTTTGCAAGTCGAATAT
TTAATGTCAGGGAAGATCCTTAGAATCGCGGAGTGCTGTGCATCGTCATCTCAGCTGCGCTTCA
GAATTCTCTGGAGAGCTGATTTGACACCTGTTTGGAAATAGCGATTAAAATTAAAAATACCCAC
CAGTTTTAAGTCTTAAGGATTTACCAGAAACATGCCTGTACCGCAGTGTACAATGATGTGCGCA
GTGTTTCACTTCAGGATTGCTTGTAATAGCGAATTACTAGAAATATCTGTCTTGCCCGTCAGCA
GAAAGCTGGTTAAGTAAATTTGGGTATATGTATACCTGACACGCCAGGTCGACTCGTATGTACC
AATGGGGATGATTTTCAAAGGGAAGTGTGGAACACTATGGTATGCCGCCATTTGGGTACAAAAC
AGAAACCTCTGCAGCTGTTGAGAAAAAGGAGAAACCTCTTCCAAGACTTAATATCCATTCTGGA
TTCTGGATTTTGGCATCCATTGTTGTGACCTATTATGTTGACTTCTTTAAAACCCTTAAAGAAA
ACTTCCACACTAGCAGCTGGTTTCTCTGTGGCAGTGCCTTGTTGCTTGTCAGTTTATCAATTGC
ATTTTACTGCATAGTCTACCTGGAATGGTATTGTGGAATTGGAGAATATGATGTCACGTATCCG
GCCTTGATACCCATTACCACTGCCTCCTTTATTGCAGCAGGAATTTGCTTCAACATTGCTTTAT
GGCATGTGTGGTCGTTTTTCACTCCATTGTTGTTGTTTACCCAGTTTATGGGGGTTGTAATGTT
TATCACACTCCTTGGATGATTTCCGAAGACACAGGGTCTTCTATGTTGCCCAGGCTGTCTTTGA
ACTCCTGGGATCAAGTGATCCTCCTGCCTCAGCCTTCGAAGTAGTTGGGACTACAGGCCCACGC
CACCGTGCCTGGCTGGACATGTAAATTTGAAGTGAGTGGTTAAACATCCAGCTAGCTGAAAGCA
TGGCAGACCCTAACAGAAAAGCTACAGTGTGTTTTTGCAACTGTGAAGTGAATGGCTTCCTGGG
AAAAATTGTGACTTTGTATAACTATTGTTGAAACCAGAATAAATTATATTTCACTTGCATATGC
TTAAATTATTAAAATTTTCAGAAGTCAGTGATACAGAAATACTATTTTGCAATGTTAATCTGTT
TGAGTCTTTGGAGAAAGTGGTTTCATTATAGGTACATAGTGCACTGTTAATATTTTAAACAAAT
AGTTCACTCTTCCATTTAAGGGATAGCAGTTCCTTGTATAAAATGACTGGATGTGTATAAAGGA
ATTATGTTGTCATGTGCCTTTAACCAGCTTTAGTAATTACTATAATCTCATATTTATGATAGTT
TTGTTAGGTGACAGGACCAAATGAAAACATTTTATGTTTTCTCATCACTTTAGATTTTATCATT
ATGTACATTACTGGGTTTTTAGCATTTCCTAATGTGAAGTTTTAATCACTTTTAAGTATACATT
TTTTTCTGTATCATTTAAATAAAATATCTTTATAACTTT

hide sequence

Protein Sequences


Protein RefSeqs	XP_003816534	(Get FASTA)	NCBI Sequence Viewer
	XP_008967791	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000018119
	ENSPPAP00000018119.1
	ENSPPAP00000018124.1

RefSeq Acc Id:	XP_008967791 ⟸ XM_008969543
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R9ATA6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPPFGYKTETSAAVEKKEKPLPRLNIHSGFWILASIVVTYYVDFFKTLKENFHTSSWFLCGSAL LLVSLSIAFYCIVYLEWYCGIGEYDVTYPALIPITTASFIAAGICFNIALWHVWSFFTPLLLFT QFMGVVMFITLLG hide sequence

RefSeq Acc Id:	XP_003816534 ⟸ XM_003816486
- Peptide Label:	isoform X1
- UniProtKB:	A0A2R9ATB1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDSSRARQQLRRRFLLLPDAEAQLDREGDAGPETSAAVEKKEKPLPRLNIHSGFWILASIVVTY YVDFFKTLKENFHTSSWFLCGSALLLVSLSIAFYCIVYLEWYCGIGEYDVTYPALIPITTASFI AAGICFNIALWHVWSFFTPLLLFTQFMGVVMFITLLG hide sequence

RefSeq Acc Id:

ENSPPAP00000018119 ⟸ ENSPPAT00000040848

RefSeq Acc Id:

ENSPPAP00000018124 ⟸ ENSPPAT00000040853

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000032192	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000040848.1	UniProtKB/TrEMBL
	ENSPPAT00000040853.1	UniProtKB/TrEMBL
InterPro	TMEM128	UniProtKB/TrEMBL
KEGG Report	pps:100992989	UniProtKB/TrEMBL
NCBI Gene	TMEM128	ENTREZGENE
PANTHER	PTHR31134	UniProtKB/TrEMBL
	TRANSMEMBRANE PROTEIN 128	UniProtKB/TrEMBL
Pfam	TMEM128	UniProtKB/TrEMBL
UniProt	A0A2R9ATA6	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9ATB1	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar