FGF13 (fibroblast growth factor 13) - Rat Genome Database
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Gene: FGF13 (fibroblast growth factor 13) Pan paniscus
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Symbol: FGF13
Name: fibroblast growth factor 13
RGD ID: 11918169
Description: ENCODES a protein that exhibits beta-tubulin binding (ortholog); ion channel binding (ortholog); microtubule binding (ortholog); INVOLVED IN apoptotic process (ortholog); cerebral cortex cell migration (ortholog); establishment of neuroblast polarity (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Developmental and Epileptic Encephalopathy 90 (ortholog); Neoplasm Metastasis (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1X138,023,010 - 138,610,952 (-)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v0X127,764,648 - 128,353,928 (-)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Comparative Map Data
FGF13
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1X138,023,010 - 138,610,952 (-)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v0X127,764,648 - 128,353,928 (-)NCBIMhudiblu_PPA_v0panPan3
FGF13
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 EnsemblX138,614,727 - 139,222,777 (-)EnsemblGRCh38hg38GRCh38
GRCh38X138,614,727 - 139,222,889 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37X137,696,888 - 138,287,185 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X137,541,401 - 137,649,181 (-)NCBINCBI36hg18NCBI36
Build 34X137,439,254 - 137,547,035NCBI
CeleraX138,079,723 - 138,653,021 (-)NCBI
Cytogenetic MapXq26.3-q27.1NCBI
HuRefX126,980,049 - 127,553,217 (-)NCBIHuRef
CHM1_1X137,624,856 - 138,198,651 (-)NCBICHM1_1
Fgf13
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X58,107,499 - 58,630,932 (-)NCBIGRCm39mm39
GRCm39 EnsemblX58,107,505 - 58,613,431 (-)Ensembl
GRCm38X59,062,139 - 59,585,572 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX59,062,145 - 59,568,071 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X56,315,327 - 56,387,613 (-)NCBIGRCm37mm9NCBIm37
MGSCv36X55,408,934 - 55,481,220 (-)NCBImm8
CeleraX45,524,338 - 45,596,524 (-)NCBICelera
Cytogenetic MapXA6NCBI
cM MapX33.31NCBI
Fgf13
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2X137,276,498 - 137,800,056 (-)NCBI
Rnor_6.0 EnsemblX142,053,654 - 142,248,369 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0X142,053,648 - 142,589,274 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X142,078,572 - 142,607,520 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X144,199,534 - 144,533,485 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1X144,272,969 - 144,606,918 (-)NCBI
CeleraX133,376,309 - 133,487,079 (-)NCBICelera
Cytogenetic MapXq36NCBI
Fgf13
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554896,122,707 - 6,621,624 (+)NCBIChiLan1.0ChiLan1.0
FGF13
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 EnsemblX108,658,941 - 109,156,594 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1X108,658,113 - 109,156,096 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Fgf13
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365138,419,588 - 8,911,010 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FGF13
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX113,460,191 - 113,932,715 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X113,460,191 - 113,955,691 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X129,613,586 - 129,689,377 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FGF13
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X113,683,688 - 114,256,728 (-)NCBI
ChlSab1.1 EnsemblX113,684,967 - 113,906,176 (-)Ensembl
Fgf13
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248087,577,422 - 8,091,216 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_003812310   ⟹   XP_003812358
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1X138,023,010 - 138,103,137 (-)NCBI
Mhudiblu_PPA_v0X127,764,648 - 127,844,801 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008964707   ⟹   XP_008962955
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1X138,023,010 - 138,610,576 (-)NCBI
Mhudiblu_PPA_v0X127,764,648 - 128,353,923 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008964709   ⟹   XP_008962957
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1X138,023,010 - 138,610,576 (-)NCBI
Mhudiblu_PPA_v0X127,764,648 - 128,353,928 (-)NCBI
Sequence:
RefSeq Acc Id: XM_034950188   ⟹   XP_034806079
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v0X127,764,648 - 128,353,158 (-)NCBI
Protein Sequences
Protein RefSeqs XP_003812358 (Get FASTA)   NCBI Sequence Viewer  
  XP_008962955 (Get FASTA)   NCBI Sequence Viewer  
  XP_008962957 (Get FASTA)   NCBI Sequence Viewer  
  XP_034806079 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_008962957   ⟸   XM_008964709
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_008962955   ⟸   XM_008964707
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_003812358   ⟸   XM_003812310
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_034806079   ⟸   XM_034950188
- Peptide Label: isoform X1


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000035766 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSPPAP00000025265 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000048092 UniProtKB/TrEMBL
InterPro FGF13 UniProtKB/TrEMBL
  Fibroblast_GF_fam UniProtKB/TrEMBL
  IL1/FGF UniProtKB/TrEMBL
KEGG Report pps:100969839 UniProtKB/TrEMBL
NCBI Gene FGF13 ENTREZGENE
PANTHER PTHR11486 UniProtKB/TrEMBL
  PTHR11486:SF145 UniProtKB/TrEMBL
Pfam FGF UniProtKB/TrEMBL
PRINTS HBGFFGF UniProtKB/TrEMBL
PROSITE HBGF_FGF UniProtKB/TrEMBL
SMART FGF UniProtKB/TrEMBL
Superfamily-SCOP SSF50353 UniProtKB/TrEMBL
UniProt A0A2R9BAH5_PANPA UniProtKB/TrEMBL