TMEM160 (transmembrane protein 160) - Rat Genome Database

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Gene: TMEM160 (transmembrane protein 160) Pan paniscus
Analyze
Symbol: TMEM160
Name: transmembrane protein 160
RGD ID: 11916529
Description: ASSOCIATED WITH genetic disease (ortholog); FOUND IN mitochondrial inner membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22053,193,335 - 53,196,071 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11955,064,618 - 55,067,360 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01944,035,858 - 44,038,600 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11952,562,414 - 52,565,133 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1952,562,497 - 52,565,121 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
TMEM160
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22053,193,335 - 53,196,071 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11955,064,618 - 55,067,360 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01944,035,858 - 44,038,600 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11952,562,414 - 52,565,133 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1952,562,497 - 52,565,121 (-)Ensemblpanpan1.1panPan2
TMEM160
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381947,045,909 - 47,048,624 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1947,045,909 - 47,048,624 (-)EnsemblGRCh38hg38GRCh38
GRCh371947,549,167 - 47,551,882 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361952,241,007 - 52,243,722 (-)NCBINCBI36Build 36hg18NCBI36
Celera1944,353,047 - 44,355,762 (-)NCBICelera
Cytogenetic Map19q13.32NCBI
HuRef1943,973,392 - 43,976,047 (-)NCBIHuRef
CHM1_11947,551,043 - 47,553,758 (-)NCBICHM1_1
T2T-CHM13v2.01949,871,218 - 49,873,934 (-)NCBIT2T-CHM13v2.0
Tmem160
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39716,186,867 - 16,189,415 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl716,186,704 - 16,189,419 (+)EnsemblGRCm39 Ensembl
GRCm38716,452,779 - 16,455,496 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl716,452,779 - 16,455,494 (+)EnsemblGRCm38mm10GRCm38
MGSCv37717,038,128 - 17,040,839 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36715,611,301 - 15,614,012 (+)NCBIMGSCv36mm8
Celera713,647,661 - 13,650,372 (+)NCBICelera
Cytogenetic Map7A2NCBI
cM Map79.13NCBI
Tmem160
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8186,292,582 - 86,295,290 (+)NCBIGRCr8
mRatBN7.2177,164,448 - 77,167,156 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl177,164,448 - 77,167,156 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx182,538,287 - 82,540,995 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0191,102,318 - 91,105,026 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0184,293,382 - 84,296,090 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0178,417,719 - 78,420,427 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl178,417,719 - 78,420,427 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0179,664,960 - 79,667,668 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4176,716,255 - 76,718,963 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera171,650,111 - 71,652,819 (+)NCBICelera
Cytogenetic Map1q21NCBI
Tmem160
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555741,009,440 - 1,012,133 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555741,009,443 - 1,011,365 (-)NCBIChiLan1.0ChiLan1.0
TMEM160
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11108,916,311 - 108,918,515 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1108,916,353 - 108,936,337 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1108,396,276 - 108,398,453 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01109,441,543 - 109,443,720 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1109,441,548 - 109,443,720 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11109,109,010 - 109,111,187 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01108,753,204 - 108,755,381 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01109,621,754 - 109,623,931 (+)NCBIUU_Cfam_GSD_1.0
Tmem160
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934919,196,054 - 19,198,451 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936664814,133 - 816,615 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936664814,183 - 816,472 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TMEM160
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl652,874,828 - 52,877,190 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1652,874,823 - 52,877,261 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2648,248,395 - 48,250,775 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TMEM160
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1640,391,030 - 40,395,835 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl640,391,114 - 40,395,755 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607320,100,471 - 20,103,853 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tmem160
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248326,624,819 - 6,627,239 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248326,625,133 - 6,627,245 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003817483 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSPPAT00000058077   ⟹   ENSPPAP00000035189
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1952,562,497 - 52,565,121 (-)Ensembl
RefSeq Acc Id: XM_003817483   ⟹   XP_003817531
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22053,193,335 - 53,196,071 (-)NCBI
NHGRI_mPanPan11955,064,618 - 55,067,360 (-)NCBI
Mhudiblu_PPA_v01944,035,858 - 44,038,600 (-)NCBI
PanPan1.11952,562,414 - 52,565,133 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003817531 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000035189.1
Reference Protein Sequences
RefSeq Acc Id: XP_003817531   ⟸   XM_003817483
- UniProtKB: A0A2R9C9Y9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSPPAP00000035189   ⟸   ENSPPAT00000058077


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000040416 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000058077.1 UniProtKB/TrEMBL
InterPro TMEM160 UniProtKB/TrEMBL
NCBI Gene TMEM160 ENTREZGENE
PANTHER PTHR16236 UniProtKB/TrEMBL
  TRANSMEMBRANE PROTEIN 160 UniProtKB/TrEMBL
UniProt A0A2R9C9Y9 ENTREZGENE, UniProtKB/TrEMBL