GNGT2 (G protein subunit gamma transducin 2) - Rat Genome Database

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Gene: GNGT2 (G protein subunit gamma transducin 2) Pan paniscus
Analyze
Symbol: GNGT2
Name: G protein subunit gamma transducin 2
RGD ID: 11915895
Description: ENCODES a protein that exhibits GTPase activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (inferred); signal transduction (inferred); PARTICIPATES IN visual phototransduction pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); trichodontoosseous syndrome (ortholog); FOUND IN heterotrimeric G-protein complex (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-T2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21915,945,744 - 15,961,591 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11717,911,781 - 17,927,626 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0178,382,933 - 8,398,544 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1178,376,583 - 8,380,827 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl178,377,023 - 8,384,059 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
GNGT2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21915,945,744 - 15,961,591 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11717,911,781 - 17,927,626 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0178,382,933 - 8,398,544 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1178,376,583 - 8,380,827 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl178,377,023 - 8,384,059 (+)Ensemblpanpan1.1panPan2
GNGT2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381749,206,234 - 49,210,574 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1749,202,791 - 49,210,574 (-)EnsemblGRCh38hg38GRCh38
GRCh371747,283,596 - 47,287,936 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361744,638,596 - 44,641,742 (-)NCBINCBI36Build 36hg18NCBI36
Build 341744,638,595 - 44,641,742NCBI
Celera1743,738,075 - 43,741,222 (-)NCBICelera
Cytogenetic Map17q21.32NCBI
HuRef1742,649,961 - 42,654,301 (-)NCBIHuRef
CHM1_11747,348,851 - 47,353,191 (-)NCBICHM1_1
T2T-CHM13v2.01750,069,317 - 50,073,657 (-)NCBIT2T-CHM13v2.0
Gngt2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391195,733,045 - 95,736,557 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1195,728,042 - 95,736,560 (+)EnsemblGRCm39 Ensembl
GRCm381195,841,772 - 95,845,734 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1195,837,216 - 95,845,734 (+)EnsemblGRCm38mm10GRCm38
MGSCv371195,703,609 - 95,707,045 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361195,658,760 - 95,661,821 (+)NCBIMGSCv36mm8
Celera11105,484,486 - 105,487,977 (+)NCBICelera
Cytogenetic Map11DNCBI
cM Map1159.01NCBI
Gngt2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81081,271,916 - 81,280,980 (+)NCBIGRCr8
mRatBN7.21080,776,003 - 80,784,235 (+)NCBImRatBN7.2mRatBN7.2
UTH_Rnor_SHR_Utx1085,729,769 - 85,732,915 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01085,227,790 - 85,230,936 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01080,619,990 - 80,623,136 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01083,654,321 - 83,658,601 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1083,655,460 - 83,658,589 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01083,458,541 - 83,462,703 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41084,554,318 - 84,557,459 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1079,548,897 - 79,552,038 (+)NCBICelera
Cytogenetic Map10q26NCBI
Gngt2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545112,249,061 - 12,252,101 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495545112,248,916 - 12,252,101 (+)NCBIChiLan1.0ChiLan1.0
GNGT2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1925,369,751 - 25,374,812 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl925,369,753 - 25,372,655 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha924,829,837 - 24,832,741 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0926,166,331 - 26,170,964 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1924,934,401 - 24,937,303 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0925,193,269 - 25,196,383 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0925,322,524 - 25,325,429 (-)NCBIUU_Cfam_GSD_1.0
Gngt2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560224,780,837 - 24,782,682 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649012,292,457 - 12,294,199 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649012,292,462 - 12,294,302 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LOC110255211
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11225,334,619 - 25,340,775 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
GNGT2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11669,609,249 - 69,613,654 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1669,609,833 - 69,610,499 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607740,714,616 - 40,718,404 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gngt2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247955,444,334 - 5,448,441 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247955,444,274 - 5,448,464 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000032239   ⟹   ENSPPAP00000009596
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl178,377,023 - 8,380,827 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000032245   ⟹   ENSPPAP00000009602
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl178,379,639 - 8,384,059 (+)Ensembl
RefSeq Acc Id: XM_003810041   ⟹   XP_003810089
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21915,957,242 - 15,961,591 (+)NCBI
NHGRI_mPanPan11717,923,272 - 17,927,626 (+)NCBI
Mhudiblu_PPA_v0178,394,197 - 8,398,544 (+)NCBI
PanPan1.1178,376,583 - 8,380,827 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008962403   ⟹   XP_008960651
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21915,957,234 - 15,961,591 (+)NCBI
NHGRI_mPanPan11717,923,265 - 17,927,626 (+)NCBI
Mhudiblu_PPA_v0178,394,234 - 8,398,544 (+)NCBI
PanPan1.1178,376,669 - 8,380,827 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008962404   ⟹   XP_008960652
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21915,957,234 - 15,961,591 (+)NCBI
NHGRI_mPanPan11717,923,335 - 17,927,626 (+)NCBI
Mhudiblu_PPA_v0178,394,252 - 8,398,544 (+)NCBI
PanPan1.1178,376,672 - 8,380,827 (+)NCBI
Sequence:
RefSeq Acc Id: XM_034941506   ⟹   XP_034797397
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21915,945,744 - 15,961,591 (+)NCBI
NHGRI_mPanPan11717,911,781 - 17,927,626 (+)NCBI
Mhudiblu_PPA_v0178,382,933 - 8,398,544 (+)NCBI
Protein Sequences
Protein RefSeqs XP_003810089 (Get FASTA)   NCBI Sequence Viewer  
  XP_008960651 (Get FASTA)   NCBI Sequence Viewer  
  XP_008960652 (Get FASTA)   NCBI Sequence Viewer  
  XP_034797397 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000009596.1
  ENSPPAP00000009602.1
Reference Protein Sequences
RefSeq Acc Id: XP_003810089   ⟸   XM_003810041
- UniProtKB: A0A2R8ZX90 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008960651   ⟸   XM_008962403
- UniProtKB: A0A2R8ZX90 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008960652   ⟸   XM_008962404
- UniProtKB: A0A2R8ZX90 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_034797397   ⟸   XM_034941506
- UniProtKB: A0A2R8ZX90 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSPPAP00000009602   ⟸   ENSPPAT00000032245
RefSeq Acc Id: ENSPPAP00000009596   ⟸   ENSPPAT00000032239
Protein Domains
G protein gamma


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000028035 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000032239.1 UniProtKB/TrEMBL
  ENSPPAT00000032245.1 UniProtKB/TrEMBL
Gene3D-CATH 4.10.260.10 UniProtKB/TrEMBL
InterPro G-protein_gamma-like_dom UniProtKB/TrEMBL
  GGL_sf UniProtKB/TrEMBL
  Gprotein-gamma UniProtKB/TrEMBL
KEGG Report pps:100994102 UniProtKB/TrEMBL
NCBI Gene GNGT2 ENTREZGENE
PANTHER GUANINE NUCLEOTIDE-BINDING PROTEIN G(I)/G(S)/G(O) SUBUNIT GAMMA-T2 UniProtKB/TrEMBL
  PTHR13809 UniProtKB/TrEMBL
Pfam G-gamma UniProtKB/TrEMBL
PRINTS GPROTEING UniProtKB/TrEMBL
PROSITE G_PROTEIN_GAMMA UniProtKB/TrEMBL
SMART G_gamma UniProtKB/TrEMBL
  GGL UniProtKB/TrEMBL
Superfamily-SCOP SSF48670 UniProtKB/TrEMBL
UniProt A0A2R8ZX90 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R8ZYF5_PANPA UniProtKB/TrEMBL