FLOT2 (flotillin 2) - Rat Genome Database

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Gene: FLOT2 (flotillin 2) Pan paniscus
Analyze
Symbol: FLOT2
Name: flotillin 2
RGD ID: 11913212
Description: ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); protease binding (ortholog); INVOLVED IN anterograde dendritic transport (ortholog); membrane raft assembly (ortholog); negative regulation of amyloid precursor protein catabolic process (ortholog); FOUND IN acrosomal membrane (ortholog); adherens junction (ortholog); anchored component of presynaptic active zone membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: flotillin-2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11728,385,192 - 28,403,523 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1728,385,191 - 28,405,585 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01727,876,424 - 27,894,836 (+)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

Genomics

Comparative Map Data
FLOT2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11728,385,192 - 28,403,523 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1728,385,191 - 28,405,585 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01727,876,424 - 27,894,836 (+)NCBIMhudiblu_PPA_v0panPan3
FLOT2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1728,879,335 - 28,897,733 (-)EnsemblGRCh38hg38GRCh38
GRCh381728,879,339 - 28,897,733 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371727,206,357 - 27,224,751 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361724,230,483 - 24,248,841 (-)NCBINCBI36hg18NCBI36
Build 341724,230,483 - 24,248,696NCBI
Celera1724,065,775 - 24,084,131 (-)NCBI
Cytogenetic Map17q11.2NCBI
HuRef1723,414,667 - 23,432,931 (-)NCBIHuRef
CHM1_11727,268,892 - 27,287,277 (-)NCBICHM1_1
Flot2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391177,928,757 - 77,951,260 (+)NCBIGRCm39mm39
GRCm39 Ensembl1177,928,757 - 77,951,260 (+)Ensembl
GRCm381178,037,931 - 78,060,434 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1178,037,931 - 78,060,434 (+)EnsemblGRCm38mm10GRCm38
MGSCv371177,851,443 - 77,873,934 (+)NCBIGRCm37mm9NCBIm37
MGSCv361177,856,499 - 77,876,627 (+)NCBImm8
Celera1185,537,567 - 85,560,033 (+)NCBICelera
Cytogenetic Map11B5NCBI
cM Map1146.74NCBI
Flot2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21062,926,047 - 62,947,759 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl1062,920,665 - 62,947,756 (+)Ensembl
Rnor_6.01065,304,901 - 65,329,332 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1065,304,902 - 65,329,312 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01066,303,072 - 66,327,750 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41064,081,463 - 64,104,166 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11064,095,085 - 64,117,788 (+)NCBI
Celera1061,904,365 - 61,926,029 (+)NCBICelera
Cytogenetic Map10q25NCBI
Flot2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554814,276,860 - 4,298,523 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554814,276,847 - 4,298,523 (+)NCBIChiLan1.0ChiLan1.0
DHRS13
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1943,050,929 - 43,066,886 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl943,052,114 - 43,071,742 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha942,206,071 - 42,222,098 (-)NCBI
ROS_Cfam_1.0943,868,682 - 43,884,709 (-)NCBI
UMICH_Zoey_3.1942,652,184 - 42,668,203 (-)NCBI
UNSW_CanFamBas_1.0942,944,151 - 42,960,172 (-)NCBI
UU_Cfam_GSD_1.0943,022,851 - 43,038,879 (-)NCBI
Flot2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560242,193,601 - 42,212,358 (-)NCBI
SpeTri2.0NW_0049365385,071,546 - 5,090,287 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FLOT2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1245,101,514 - 45,120,463 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11245,102,205 - 45,120,503 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21247,153,539 - 47,163,743 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FLOT2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11622,639,403 - 22,658,311 (-)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl1622,639,381 - 22,658,194 (-)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660757,449,441 - 7,468,230 (+)NCBIVero_WHO_p1.0
Flot2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247861,449,001 - 1,465,208 (-)NCBIHetGla_female_1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000017605   ⟹   ENSPPAP00000003815
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1728,385,191 - 28,403,523 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000017632   ⟹   ENSPPAP00000003821
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1728,385,537 - 28,403,523 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000017670   ⟹   ENSPPAP00000003830
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1728,385,643 - 28,405,585 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000017682   ⟹   ENSPPAP00000003835
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1728,385,643 - 28,403,517 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000017683   ⟹   ENSPPAP00000003836
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1728,385,643 - 28,402,301 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000017689   ⟹   ENSPPAP00000003837
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1728,385,643 - 28,402,301 (+)Ensembl
RefSeq Acc Id: XM_003812696   ⟹   XP_003812744
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.11728,385,192 - 28,403,523 (+)NCBI
Mhudiblu_PPA_v01727,876,424 - 27,894,836 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008965132   ⟹   XP_008963380
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.11728,385,486 - 28,403,523 (+)NCBI
Mhudiblu_PPA_v01727,876,424 - 27,894,836 (+)NCBI
Sequence:
RefSeq Acc Id: XM_034942182   ⟹   XP_034798073
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01727,888,223 - 27,894,836 (+)NCBI
Protein Sequences
Protein RefSeqs XP_003812744 (Get FASTA)   NCBI Sequence Viewer  
  XP_008963380 (Get FASTA)   NCBI Sequence Viewer  
  XP_034798073 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_003812744   ⟸   XM_003812696
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_008963380   ⟸   XM_008965132
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_034798073   ⟸   XM_034942182
- Peptide Label: isoform X3
RefSeq Acc Id: ENSPPAP00000003815   ⟸   ENSPPAT00000017605
RefSeq Acc Id: ENSPPAP00000003821   ⟸   ENSPPAT00000017632
RefSeq Acc Id: ENSPPAP00000003835   ⟸   ENSPPAT00000017682
RefSeq Acc Id: ENSPPAP00000003836   ⟸   ENSPPAT00000017683
RefSeq Acc Id: ENSPPAP00000003837   ⟸   ENSPPAT00000017689
RefSeq Acc Id: ENSPPAP00000003830   ⟸   ENSPPAT00000017670


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000015814 Ensembl, ENTREZGENE
Ensembl Protein ENSPPAP00000003815 ENTREZGENE
  ENSPPAP00000003821 ENTREZGENE
NCBI Gene FLOT2 ENTREZGENE