UBE2E1 (ubiquitin conjugating enzyme E2 E1) - Rat Genome Database

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Gene: UBE2E1 (ubiquitin conjugating enzyme E2 E1) Pan paniscus
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Symbol: UBE2E1
Name: ubiquitin conjugating enzyme E2 E1
RGD ID: 11909800
Description: ENCODES a protein that exhibits ATP binding (inferred); ISG15 transferase activity (inferred); transferase activity (inferred); INVOLVED IN protein monoubiquitination (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); juvenile rheumatoid arthritis (ortholog); skin disease (ortholog); FOUND IN nucleus (inferred); ubiquitin ligase complex (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: ubiquitin-conjugating enzyme E2 E1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2223,768,360 - 23,852,050 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1323,773,125 - 23,856,807 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0323,719,632 - 23,803,302 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1324,045,758 - 24,127,826 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl324,045,747 - 24,127,820 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
UBE2E1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2223,768,360 - 23,852,050 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1323,773,125 - 23,856,807 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0323,719,632 - 23,803,302 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1324,045,758 - 24,127,826 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl324,045,747 - 24,127,820 (+)Ensemblpanpan1.1panPan2
UBE2E1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38323,805,955 - 23,891,640 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl323,805,955 - 23,891,640 (+)EnsemblGRCh38hg38GRCh38
GRCh37323,847,446 - 23,933,131 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36323,822,443 - 23,907,811 (+)NCBINCBI36Build 36hg18NCBI36
Build 34323,822,442 - 23,907,810NCBI
Celera323,783,561 - 23,868,992 (+)NCBICelera
Cytogenetic Map3p24.2NCBI
HuRef323,793,438 - 23,879,219 (+)NCBIHuRef
CHM1_1323,799,158 - 23,884,951 (+)NCBICHM1_1
T2T-CHM13v2.0323,810,731 - 23,896,417 (+)NCBIT2T-CHM13v2.0
Ube2e1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39144,137,852 - 4,186,967 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl144,137,837 - 4,186,974 (+)EnsemblGRCm39 Ensembl
GRCm381418,282,726 - 18,332,004 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1418,282,722 - 18,331,859 (-)EnsemblGRCm38mm10GRCm38
MGSCv371419,115,243 - 19,164,358 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361417,075,847 - 17,124,962 (-)NCBIMGSCv36mm8
Celera1413,974,286 - 14,024,829 (-)NCBICelera
Cytogenetic Map14A1NCBI
cM Map147.08NCBI
Ube2e1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8159,870,528 - 9,924,194 (+)NCBIGRCr8
mRatBN7.2157,439,751 - 7,493,410 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl157,439,759 - 7,493,400 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx159,586,863 - 9,639,117 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01510,499,658 - 10,551,914 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0158,800,075 - 8,852,332 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0158,124,869 - 8,178,252 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl158,125,526 - 8,177,781 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01512,188,488 - 12,240,293 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera157,495,553 - 7,546,701 (+)NCBICelera
Cytogenetic Map15p16NCBI
Ube2e1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543015,648,476 - 15,734,767 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495543015,648,736 - 15,734,767 (+)NCBIChiLan1.0ChiLan1.0
UBE2E1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12319,863,136 - 19,937,272 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2319,863,253 - 19,937,247 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2319,861,218 - 19,936,689 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02320,176,162 - 20,251,667 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.12319,985,486 - 20,061,512 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02320,094,687 - 20,170,077 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02320,203,814 - 20,279,270 (-)NCBIUU_Cfam_GSD_1.0
Ube2e1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118182,348,783 - 182,418,938 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647315,487,014 - 15,557,513 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647315,487,341 - 15,557,516 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LOC102160336
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1310,605,503 - 10,683,816 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11310,605,837 - 10,683,819 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21312,058,613 - 12,131,848 (+)NCBISscrofa10.2Sscrofa10.2susScr3
UBE2E1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11568,483,247 - 68,566,645 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1568,484,589 - 68,568,987 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604141,607,680 - 41,690,874 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSPPAT00000055739   ⟹   ENSPPAP00000032869
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl324,045,747 - 24,127,820 (+)Ensembl
Ensembl Acc Id: ENSPPAT00000055745   ⟹   ENSPPAP00000032875
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl324,045,791 - 24,127,122 (+)Ensembl
Ensembl Acc Id: ENSPPAT00000055750   ⟹   ENSPPAP00000032880
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl324,048,954 - 24,127,820 (+)Ensembl
RefSeq Acc Id: XM_003826163   ⟹   XP_003826211
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2223,772,899 - 23,852,050 (+)NCBI
NHGRI_mPanPan1323,777,668 - 23,856,807 (+)NCBI
Mhudiblu_PPA_v0323,724,164 - 23,803,302 (+)NCBI
PanPan1.1324,048,960 - 24,127,826 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008951639   ⟹   XP_008949887
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2223,772,872 - 23,851,242 (+)NCBI
NHGRI_mPanPan1323,777,640 - 23,856,008 (+)NCBI
Mhudiblu_PPA_v0323,724,135 - 23,801,848 (+)NCBI
PanPan1.1324,048,949 - 24,126,418 (+)NCBI
Sequence:
RefSeq Acc Id: XM_034955969   ⟹   XP_034811860
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2223,768,360 - 23,852,050 (+)NCBI
NHGRI_mPanPan1323,773,125 - 23,856,807 (+)NCBI
Mhudiblu_PPA_v0323,719,632 - 23,803,302 (+)NCBI
RefSeq Acc Id: XM_063602729   ⟹   XP_063458799
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2223,768,369 - 23,852,050 (+)NCBI
RefSeq Acc Id: XP_008949887   ⟸   XM_008951639
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_003826211   ⟸   XM_003826163
- Peptide Label: isoform X4
- UniProtKB: A0A2R9BWP2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_034811860   ⟸   XM_034955969
- Peptide Label: isoform X2
- UniProtKB: A0A2R9C2G2 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSPPAP00000032875   ⟸   ENSPPAT00000055745
Ensembl Acc Id: ENSPPAP00000032869   ⟸   ENSPPAT00000055739
Ensembl Acc Id: ENSPPAP00000032880   ⟸   ENSPPAT00000055750
RefSeq Acc Id: XP_063458799   ⟸   XM_063602729
- Peptide Label: isoform X1
Protein Domains
UBC core


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000039295 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000055739.1 UniProtKB/TrEMBL
  ENSPPAT00000055745.1 UniProtKB/TrEMBL
  ENSPPAT00000055750.1 UniProtKB/TrEMBL
Gene3D-CATH 3.10.110.10 UniProtKB/TrEMBL
InterPro UBQ-conjugat_E2 UniProtKB/TrEMBL
  UBQ-conjugating_AS UniProtKB/TrEMBL
  UBQ-conjugating_enzyme/RWD UniProtKB/TrEMBL
NCBI Gene UBE2E1 ENTREZGENE
PANTHER UBIQUITIN-CONJUGATING ENZYME E2 UniProtKB/TrEMBL
  UBIQUITIN-CONJUGATING ENZYME E2 E1 UniProtKB/TrEMBL
Pfam UQ_con UniProtKB/TrEMBL
PROSITE UBC_1 UniProtKB/TrEMBL
  UBC_2 UniProtKB/TrEMBL
SMART UBCc UniProtKB/TrEMBL
Superfamily-SCOP SSF54495 UniProtKB/TrEMBL
UniProt A0A2R9BWN7_PANPA UniProtKB/TrEMBL
  A0A2R9BWP2 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9C2G2 ENTREZGENE, UniProtKB/TrEMBL