TACR2 (tachykinin receptor 2) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: TACR2 (tachykinin receptor 2) Pan paniscus
Analyze
Symbol: TACR2
Name: tachykinin receptor 2
RGD ID: 11908270
Description: ENCODES a protein that exhibits substance K receptor activity (ortholog); INVOLVED IN intestine smooth muscle contraction (ortholog); negative regulation of luteinizing hormone secretion (ortholog); operant conditioning (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); asthma (ortholog); bronchial disease (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog); sperm flagellum (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: substance-K receptor
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11068,403,637 - 68,415,819 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1068,403,979 - 68,415,224 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01065,872,795 - 65,885,154 (-)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

References

Genomics

Comparative Map Data
TACR2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11068,403,637 - 68,415,819 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1068,403,979 - 68,415,224 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01065,872,795 - 65,885,154 (-)NCBIMhudiblu_PPA_v0panPan3
TACR2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1069,403,903 - 69,416,918 (-)EnsemblGRCh38hg38GRCh38
GRCh381069,403,903 - 69,416,918 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371071,163,659 - 71,176,674 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361070,833,964 - 70,846,680 (-)NCBINCBI36hg18NCBI36
Build 341070,834,587 - 70,846,085NCBI
Celera1064,440,372 - 64,453,089 (-)NCBI
Cytogenetic Map10q22.1NCBI
HuRef1065,163,875 - 65,176,488 (-)NCBIHuRef
CHM1_11071,445,702 - 71,458,328 (-)NCBICHM1_1
Tacr2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391062,088,217 - 62,101,769 (+)NCBIGRCm39mm39
GRCm39 Ensembl1062,088,217 - 62,101,769 (+)Ensembl
GRCm381062,252,438 - 62,265,990 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1062,252,438 - 62,265,990 (+)EnsemblGRCm38mm10GRCm38
MGSCv371061,715,186 - 61,728,738 (+)NCBIGRCm37mm9NCBIm37
MGSCv361061,648,113 - 61,661,347 (+)NCBImm8
Celera1063,355,717 - 63,369,239 (+)NCBICelera
Cytogenetic Map10B4NCBI
Tacr2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.22030,208,907 - 30,223,446 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl2030,208,907 - 30,223,446 (+)Ensembl
Rnor_6.02031,892,515 - 31,905,153 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2031,892,515 - 31,905,153 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02033,683,625 - 33,697,583 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera2031,631,222 - 31,645,611 (+)NCBICelera
Cytogenetic Map20q11NCBI
Tacr2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543721,719,246 - 21,731,963 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495543721,719,246 - 21,731,963 (+)NCBIChiLan1.0ChiLan1.0
TACR2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1420,518,797 - 20,531,118 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl420,517,563 - 20,531,867 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha420,648,836 - 20,661,157 (-)NCBI
ROS_Cfam_1.0420,789,440 - 20,803,600 (-)NCBI
UMICH_Zoey_3.1420,690,847 - 20,703,141 (-)NCBI
UNSW_CanFamBas_1.0420,894,732 - 20,907,028 (-)NCBI
UU_Cfam_GSD_1.0421,238,092 - 21,250,413 (-)NCBI
Tacr2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721360,560,454 - 60,573,628 (+)NCBI
SpeTri2.0NW_0049365219,053,179 - 9,065,790 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TACR2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1472,462,046 - 72,475,554 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11472,463,405 - 72,476,034 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21478,472,145 - 78,484,779 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TACR2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1961,902,565 - 61,915,402 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl961,903,477 - 61,914,558 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604822,643,039 - 22,655,064 (+)NCBIVero_WHO_p1.0
Tacr2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247543,658,128 - 3,670,432 (-)NCBIHetGla_female_1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000034618   ⟹   ENSPPAP00000011956
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1068,403,979 - 68,415,224 (-)Ensembl
RefSeq Acc Id: XM_003815925   ⟹   XP_003815973
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.11068,403,637 - 68,415,819 (-)NCBI
Mhudiblu_PPA_v01065,872,795 - 65,885,154 (-)NCBI
Sequence:
RefSeq Acc Id: XM_003815926   ⟹   XP_003815974
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.11068,403,826 - 68,415,713 (-)NCBI
Mhudiblu_PPA_v01065,872,795 - 65,885,048 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003815973 (Get FASTA)   NCBI Sequence Viewer  
  XP_003815974 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_003815973   ⟸   XM_003815925
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_003815974   ⟸   XM_003815926
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: ENSPPAP00000011956   ⟸   ENSPPAT00000034618


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000029177 Ensembl, ENTREZGENE
Ensembl Protein ENSPPAP00000011956 ENTREZGENE
NCBI Gene TACR2 ENTREZGENE