ACOT4 (acyl-CoA thioesterase 4) - Rat Genome Database

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Gene: ACOT4 (acyl-CoA thioesterase 4) Pan paniscus
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Symbol: ACOT4
Name: acyl-CoA thioesterase 4
RGD ID: 11907413
Description: ENCODES a protein that exhibits acyl-CoA hydrolase activity (ortholog); succinyl-CoA hydrolase activity (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); butyrate metabolic process (ortholog); dicarboxylic acid catabolic process (ortholog); ASSOCIATED WITH intellectual disability (ortholog); FOUND IN peroxisome (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOW QUALITY PROTEIN: acyl-coenzyme A thioesterase 4; peroxisomal succinyl-coenzyme A thioesterase
RGD Orthologs
Human
Mouse
Rat
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11473,008,597 - 73,012,673 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1473,008,909 - 73,012,561 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01454,150,843 - 54,155,119 (+)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
peroxisome  (ISO)

Molecular Function

References

Genomics

Comparative Map Data
ACOT4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11473,008,597 - 73,012,673 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1473,008,909 - 73,012,561 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01454,150,843 - 54,155,119 (+)NCBIMhudiblu_PPA_v0panPan3
ACOT4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1473,591,873 - 73,595,766 (+)EnsemblGRCh38hg38GRCh38
GRCh381473,591,873 - 73,595,766 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371474,058,577 - 74,062,470 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361473,128,163 - 73,132,223 (+)NCBINCBI36hg18NCBI36
Celera1454,094,503 - 54,098,556 (+)NCBI
Cytogenetic Map14q24.3NCBI
HuRef1454,226,329 - 54,230,382 (+)NCBIHuRef
CHM1_11473,998,002 - 74,002,055 (+)NCBICHM1_1
Acot4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391284,084,028 - 84,091,497 (+)NCBIGRCm39mm39
GRCm39 Ensembl1284,085,153 - 84,095,375 (+)Ensembl
GRCm381284,037,254 - 84,044,723 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1284,038,379 - 84,048,601 (+)EnsemblGRCm38mm10GRCm38
MGSCv371285,379,329 - 85,385,673 (+)NCBIGRCm37mm9NCBIm37
MGSCv361284,928,127 - 84,934,471 (+)NCBImm8
Celera1285,484,852 - 85,491,186 (+)NCBICelera
Cytogenetic Map12D1NCBI
Acot4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.26103,668,699 - 103,674,037 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl6103,668,753 - 103,673,917 (+)Ensembl
Rnor_6.06107,517,668 - 107,522,952 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6107,517,668 - 107,522,952 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06118,021,264 - 118,026,536 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46108,075,508 - 108,080,792 (+)NCBIRGSC3.4rn4RGSC3.4
Celera6101,498,707 - 101,503,970 (+)NCBICelera
Cytogenetic Map6q24NCBI
ACOT4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1846,889,326 - 46,894,379 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl846,852,880 - 46,911,640 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha846,573,784 - 46,580,670 (+)NCBI
ROS_Cfam_1.0847,118,497 - 47,125,383 (+)NCBI
UMICH_Zoey_3.1846,786,164 - 46,791,040 (+)NCBI
UNSW_CanFamBas_1.0846,804,351 - 46,811,227 (+)NCBI
UU_Cfam_GSD_1.0847,194,704 - 47,201,587 (+)NCBI
Acot4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864029,152,711 - 29,157,109 (-)NCBI
SpeTri2.0NW_0049364882,912,016 - 2,914,995 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LOC100158115
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl796,868,157 - 96,949,358 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1796,941,065 - 96,945,834 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.27102,787,631 - 102,791,737 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ACOT4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12450,806,736 - 50,811,294 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl2450,807,212 - 50,811,181 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605338,972,271 - 38,996,921 (+)NCBIVero_WHO_p1.0


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003845974 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide SSBP01000169 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSPPAT00000051970   ⟹   ENSPPAP00000029122
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1473,008,909 - 73,012,561 (+)Ensembl
RefSeq Acc Id: XM_003845974   ⟹   XP_003846022
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.11473,008,597 - 73,012,673 (+)NCBI
Mhudiblu_PPA_v01454,150,843 - 54,155,119 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003846022 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_003846022   ⟸   XM_003845974
- Sequence:
RefSeq Acc Id: ENSPPAP00000029122   ⟸   ENSPPAT00000051970


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000037580 Ensembl, ENTREZGENE
NCBI Gene ACOT4 ENTREZGENE