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Gene: MTF1 (metal regulatory transcription factor 1) Pan paniscus

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Symbol:

MTF1

Name:

metal regulatory transcription factor 1

RGD ID:

11903655

Description:

ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (inferred); DNA-binding transcription activator activity, RNA polymerase II-specific (inferred); DNA-binding transcription factor activity (inferred); INVOLVED IN cartilage homeostasis (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Charcot-Marie-Tooth disease dominant intermediate C (ortholog); FOUND IN cytoplasm (inferred); nucleoplasm (inferred); nucleus (inferred)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	188,977,327 - 189,027,954 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	188,106,469 - 188,152,667 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	37,088,744 - 37,134,318 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	38,432,716 - 38,482,142 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	38,438,294 - 38,482,142 (-)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autism spectrum disorder (ISO)

autistic disorder (ISO)

Charcot-Marie-Tooth disease dominant intermediate C (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cartilage homeostasis (IEA,ISO)

cellular response to zinc ion (IEA)

DNA-templated transcription (IEA)

positive regulation of DNA-templated transcription (IEA,ISO)

positive regulation of transcription by RNA polymerase II (IEA,ISO)

regulation of transcription by RNA polymerase II (IEA)

response to cadmium ion (IEA,ISO)

response to oxidative stress (IEA,ISO)

Cellular Component

cytoplasm (IEA)

nucleoplasm (IEA)

nucleus (IEA)

Molecular Function

cis-regulatory region sequence-specific DNA binding (IEA)

DNA-binding transcription activator activity, RNA polymerase II-specific (IEA)

DNA-binding transcription factor activity (IEA)

histone acetyltransferase binding (IEA)

protein binding (ISO)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (IEA)

sequence-specific double-stranded DNA binding (IEA)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

MTF1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	188,977,327 - 189,027,954 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	188,106,469 - 188,152,667 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	37,088,744 - 37,134,318 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	38,432,716 - 38,482,142 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	38,438,294 - 38,482,142 (-)	Ensembl	panpan1.1		panPan2

MTF1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	37,809,574 - 37,859,592 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	37,809,574 - 37,859,592 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	38,275,246 - 38,325,264 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	38,047,826 - 38,097,879 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	37,948,943 - 37,994,324	NCBI
Celera	1	36,553,063 - 36,603,115 (-)	NCBI		Celera
Cytogenetic Map	1	p34.3	NCBI
HuRef	1	36,393,522 - 36,443,287 (-)	NCBI		HuRef
CHM1_1	1	38,391,063 - 38,441,086 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	37,676,462 - 37,726,477 (-)	NCBI		T2T-CHM13v2.0

Mtf1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Build 34	1	36,271,267 - 36,284,160	NCBI
GRCm39	4	124,696,342 - 124,743,593 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	124,695,897 - 124,743,593 (+)	Ensembl		GRCm39 Ensembl
GRCm38	4	124,802,549 - 124,849,800 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	124,802,104 - 124,849,800 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	124,479,793 - 124,527,044 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	124,304,876 - 124,349,954 (+)	NCBI		MGSCv36	mm8
Celera	4	123,124,096 - 123,171,046 (+)	NCBI		Celera
Cytogenetic Map	4	D2.2	NCBI
cM Map	4	57.91	NCBI

Mtf1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	142,347,024 - 142,391,810 (+)	NCBI		GRCr8
mRatBN7.2	5	137,062,319 - 137,107,136 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	137,062,376 - 137,107,136 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	139,767,233 - 139,812,075 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	141,537,246 - 141,582,093 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	141,544,424 - 141,589,269 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	142,797,340 - 142,843,896 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	142,797,366 - 142,842,122 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0 Ensembl	5	142,332,607 - 142,376,370 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	146,567,984 - 146,614,540 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	144,135,674 - 144,180,430 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	144,145,451 - 144,187,287 (+)	NCBI
Celera	5	135,585,105 - 135,629,881 (+)	NCBI		Celera
Cytogenetic Map	5	q36	NCBI

Mtf1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955452	15,580,460 - 15,627,844 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955452	15,580,460 - 15,627,844 (-)	NCBI	ChiLan1.0	ChiLan1.0

MTF1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	15	4,679,945 - 4,723,111 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	15	4,680,372 - 4,717,561 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	15	4,921,849 - 4,965,016 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	15	4,808,453 - 4,851,650 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	15	4,808,870 - 4,846,324 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	15	4,668,306 - 4,711,440 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	15	4,734,863 - 4,777,974 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	15	4,751,184 - 4,794,296 (+)	NCBI		UU_Cfam_GSD_1.0

Mtf1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	54,160,425 - 54,202,806 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936474	19,981,466 - 20,027,536 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936474	19,981,483 - 20,027,541 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MTF1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	93,839,205 - 93,884,409 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	93,837,195 - 93,884,427 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	86,652,512 - 86,655,135 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MTF1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	95,002,623 - 95,052,366 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	95,003,504 - 95,046,718 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666033	21,758,719 - 21,810,019 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Mtf1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624764	20,515,307 - 20,557,105 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624764	20,510,925 - 20,557,134 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003815482	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055095195	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063608681	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSPPAT00000043055 ⟹ ENSPPAP00000020263

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	1	38,438,294 - 38,482,142 (-)	Ensembl

RefSeq Acc Id:

XM_003815482 ⟹ XP_003815530

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	1	188,977,327 - 189,027,954 (+)	NCBI
NHGRI_mPanPan1	1	188,106,469 - 188,152,667 (+)	NCBI
Mhudiblu_PPA_v0	1	37,088,744 - 37,134,318 (-)	NCBI
PanPan1.1	1	38,432,716 - 38,482,142 (-)	NCBI

Sequence:

show sequence

GGAAGCGGAAGTGACGTTAGGGGAAGGTGGGGGCAATCATGGTGCCGCTGGGGAGGGGAGAAGC
TGCTGCTGCCGCCGTTGCCGGGAGCCGCGGAGACAAGTCATTACGTTTTCATTTCTCACAATTG
GGCTGAGCACAACTGAACCATGGGGGAACACAGTCCAGACAACAACATCATCTACTTTGAGGCA
GAGGAAGATGAGCTGACCCCCGATGATAAAATGCTCAGGTTTGTGGATAAAAACGGACTGGTGC
CTTCCTCATCTGGAACTGTTTATGATAGGACCACTGTTCTTATTGAGCAGGACCCTGGCACTTT
GGAGGATGAAGATGACGACGGACAGTGCGGAGAACACTTGCCTTTTCTAGTAGGGGGTGAAGAG
GGCTTTCACCTGATAGATCATGAAGCAATGTCCCAGGGTTATGTGCAGCACATTATCTCACCAG
ATCAGATTCATTTGACAATAAACCCTGGTTCCACACCCATGCCAAGAAATATTGAAGGTGCAAC
CCTCACTCTGCAGTCGGAATGTCCGGAAACAAAACGTAAAGAAGTAAAGCGGTACCAATGTACC
TTTGAGGGCTGTCCCCGCACCTACAGCACAGCAGGCAACCTGCGAACCCACCAGAAGACTCACC
GAGGAGAGTACACCTTTGTCTGTAATCAGGAGGGCTGTGGCAAAGCCTTCCTTACCTCTTACAG
CCTCAGGATCCACGTGCGAGTGCACACGAAGGAGAAGCCATTTGAGTGTGACGTGCAGGGCTGT
GAGAAGGCATTCAACACACTGTACAGGCTGAAAGCACATCAGAGGCTTCACACAGGGAAAACGT
TTAACTGTGAATCTGAAGGCTGCAGCAAATACTTCACCACACTCAGTGATCTGAGGAAGCACAT
TCGAACTCATACAGGGGAAAAGCCATTTCGGTGCGATCACGATGGCTGTGGAAAAGCATTTGCA
GCAAGCCACCACCTTAAAACTCACGTTCGTACACATACTGGTGAAAGACCCTTCTTCTGCCCCA
GTAATGGCTGTGAGAAAACATTCAGCACTCAATACAGTCTCAAAAGTCACATGAAAGGTCATGA
TAACAAAGGACACTCATACAATGCACTTCCACAACACAATGGATCAGAGGATACAAATCACTCA
CTTTGTCTAAGTGACTTGAGCCTTCTGTCCACAGATTCTGAATTGCGAGAAAATTCCAGTACGA
CCCAGGGCCAGGACCTCAGCACAATTTCACCAGCAATCATCTTTGAATCAATGTTCCAGAATTC
AGATGATACGGCAATTCAGGAAGATCCTCAACAGACAGCTTCCTTGATTGAAAGTTTTAATGGT
GATGCAGAGTCAGTCAGTGATGTTCCGCCATCCACAGGAAATTCAGCATCTTTATCTCTTCCAC
TTGTACTGCAGCCTGGCCTCTCCGAGCCACCCCAGCCTCTACTACCTGCCTCAGCTCCGTCTGC
TCCTCCGCCTGCTCCCTCCCTAGGACCTGGCTCCCAGCAAGCTGCATTTGGCAACCCCCCTGCT
CTCTTACAACCTCCAGAAGTGCCTGTTCCCCACAGCACACAGTTTGCTGCTAATCATCAAGAGT
TTCTTCCGCACCCCCAGGCACCGCAGCCCATCGTACCAGGACTTTCTGTTGTTGCTGGGGCTTC
TGCATCAGCAGCGGCAGTGGCATCAGCTGTGGCAGCACCAGCCCCACCACAAAGTACTACTGAG
CCCCTGCCAGCCATGGTCCAGACTCTGCCCCTGGGTGCCAACTCTGTCCTAACTAATAATCCCA
CAATAACCATCACCCCAACTCCCAACACAGCTATCCTGCAGTCCAGCCTAGTCATGGGAGAACA
GAACTTACAATGGATATTAAATGGTGCCACCAGTTCTCCACAAAACCAAGAACAAATTCAGCAA
GCATCTAAAGTTGAGAAGGTGTTTTTTACCACTGCAGTACCAGTAGCCAGTAGCCCAGGGAGCT
CTGTCCAGCAGATTGGCCTCAGTGTTCCTGTGATCATCATCAAACAAGAAGAGGCATGTCAGTG
TCAGTGTGCATGCCGGGACTCTGCAAAGGAGCGGGCATCCAGCAGGAGAAAGGGCTGCTCCTCC
CCACCCCCTCCAGAGCCGAGCCCCCAGGCTCCTGATGGGCCCAGCCTGCAGCTCCCAGCGCAGA
CTTTTTCTTCAGCCCCTGTTCCCGGGTCATCATCCTCTACCATGCCCTCCTCCTGTGAGCAAAG
CCGACAAGCAGAGACTCCTTCAGACCCTCAGACAGAAACATTAAGTGCCATGGATGTGTCAGAG
TTTCTATCCCTCCAGAGCCTGGACACCCCGTCCAATCTGATTCCCATTGAAGCACTACTGCAGG
GGGAGGAGGAGATGGGCCTCACCAGCAGCTTCTCCAAGTGAAGGGCCCATGTGTGCTCACCTCT
GGGAAAAGTGGGTGAGCAGGAGGCATGAGGTACAATGCCTGCCATCATGGGTCAGAAATTTGAA
GGATGAAGAAATCTACTGTTTGAAATCCTCACCTTTCAGACGTATTTTCTTTATTCACATCCCA
GGAGCATCCATTTTAAGGAACTATTCTTTGGAAAAAACAAAAAACAAAAAACAACAAAAAAAGC
TAAGTTATAAGTGAACTGTTTGGCTGCACTGTATGTCACTTTTGCTTGTTGTCATGTGAACTTG
GAAACTAAGGTTACTCGTGTGCATAAAAATTCTAAATGAAAGGGTGTGGTTTCCATCAATCTGA
TGCTGCCCATCGCTTGCACTGGGGTCTTTGTGGATCGGGCAGGAGAGTTCAGTGTGTTGGGTGT
TGCTCCTTCCTATGTGTCTTTTGAATCTGAGGCTGACATTTGCTTGGAAGGCCAGACCCTTGCT
CCATCAGAGAGGGCAGTGGCAAAGGCCAGTGAGGCAGCTGTGAGTTGGACAGGGTTCAGGTGAG
ATGGTGTTGTCATTTGTGCTTAGTGTTGGTGGTGCTCAGGGTGGATAACACGGGTCGTTCTGCA
GCCCGCTTCAGCACAAATAGGCAGCTTAAGGCCTGGCTCACAGGCTGTGGGGTTGATCTGGCTC
TGCAGAGGCCCTAGGCAGCTTGTTGACTGCTGTCTGTTGATGACGTGTGTGCAAAGCAGGCTCT
AGCAACATGATCACTGTCTTTGCCTTCCTGGTTCTTTCTCTCGGTTGGTTGCCAGGGCTTGCAG
ATCGCAGTGAATTTTCCTTGGGGAACATCGCTGTTTTGTCCTAGAGTGAACTTGTGGCTTATGG
CCAGTGCTGTTTGGTGGTCTGCCTTCTTTTTAATGGTATTTTCTTCCTCAGAGCAGAAGGGCTG
CATTTTGCTTATCAGAAGAAGGTGCAGATTTAAGGGAATTCATATGAGGTGGCATGTAATTGGC
AGGCCAGGTGTCCTGGTTCCAGGTTCCAGCCAGGCTTTGGGTTGCCCCCTCCATCTCTGCCCCC
CTCTGGATTTTGCATACAGCCTCATACAGTGCAAACAAGGATGTGACTTGCTCAGCTTAGTCAT
GTGATTTATTAAAAAAAAAAAAAAGAAACACAAAACGATGATCTTCTACTCAGGGTATAGCAAA
ACAAAAAAATTCCCTTTCCACCAAAAAGCCTGAAATGTTGCAATAAGTTATCTCATTTGGAATG
TTTCATTAAGTTGTGTTATAGGAAAAATTGTGTGTGTGTGTTATAGAATTATATCCATATGTCT
GCCTTTGGCTCCAAGTCATTGCCTCTTAAAATAAAAGATACAATCCATACTAGCATGAAAAGTT
TCCCTCAACAGGCTATATTAACATAGTCGTGAGTGCTGACCAAACTCACCGAGCTCAGAGGCCA
GGCATGGCCTGAGGTGCAGAATAGGCCTCTGCCTCCAAAGAGCCCTTTCCTTGCCCTGAGCAAG
GAGTGGTGTTCCACAAACAAGGCTGCTCTTCTAAGCCAACAGTGTCAGGCAGGAAGCAGCCATA
ATTTTGCCTTGCATTTTCATTCCCTGATGTAAAGGGATCTGCATTGGTCACTCTCCTGTTCTCT
GAGCCATTGCTCAGGGCCAGCCAAGATATTATTGAGAACAGATAATTTACCTTGGAGCCAGAGG
CCCTCCCTGCCTTTAGCAAGGATGTTCAGGGACAGACAAAGAGGGCAGTGGTGGTGAATGTTGT
TACTGCCATGAGGAGAAATGGCAGTAAGAAATCTTAACTACAAGCAGCCAATTTCTCATTCCAG
GACCCTAGCCAGAATAATTGACTTCTTTTTTTTTTTGAGACAGAGTTTTGCTTTCGTTGCCCAG
GCTGGAGTGCAGTGGCGCAATCTTGGCTCACCGCAACCTCCACTTCCCAGGTTCAAGCAATTCT
GCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCATGTGCCACCACGCCTGGCTAATTTTGTATT
TTTAGTAGAGACGGGGTTTCTCCATGTTGGTCAGGCTGGTCTCGAACTCCCAACGTCAGGTGAT
CCTCCCGCCTCAGTCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCATGCCTGGTCTAGGG
AATTGACTTCTTTTTGACCTTCTGCACTCCCTTCCCCAAAAGGATTGTGGCTTCTGTTGACCAT
TGACCTCAGCAGAAGTTGATAAGGAAGGAGGAATTTCCTATTAACACAGTGGGTTAGTCCTCCT
GGAAAACCAACTGCTGAGCATGAGTTGTCCTTGGCTGTCTCTGGGCCTCGCACCCATGGGAAGT
TTTGAGGTGGGGCCCTTGCTGTTTACAACTTCTGAGAGAGTAGTGATGGGACCCCAAAGTAAGC
TTGTATCAGAGGGCAGTAATGACCTTCCCATATCCCCATCCTGTGGTCACCTGGGATTTGGGTT
CCCTGGGGCGGAAGTGGGAAATAGGAGCCCAGGGAAGGACATCTGAAGCACCCACAGTTTAAAT
AGCGACTCTTCTTGGTTAGCCAGGGCTGTGCTCATGTTGGGCCCTACCCAGGTCAGTGGCCTTT
TCACTCTCAAAGATCGGGGGTGACGAAGCAGCATCTTAAACAGTGTTTAGGCTGACAGATTTTT
CCAGTTGAAGAAGCTGAAGTATCTGCCTTTTGAGGGTGACTTTAGATTACAAGAGAGACTATCA
GATCCAATCAGCTTTTGAAAAATCAGGAATGTGCTTAAAATGCCAGTGAGTGGTTGTGAAGATC
AGGTTTATTTCCCAGGATAGGCAGTCTTTCTTTCCCTCCTTTTCCAGTTCTCTTTTCCTACCTG
TCCTTCCATAAGCCTGGTCTCTAGTGCCGAGGACCTTGGAGAAGAGAGGGCCCCTAGCTAAGCT
GGAGCCAGAAAGAACCTTCACGGTGAGTGTGGTTTCCCAAACTTGGGAAATGAACCTAGGGTGA
GGTTAGGGAGGATTTGTAGAATTCTAGCAGGTAAAAATCAAGCCTTTTTCCCCTCCCATAGTAA
ACTTAACCATTTTCACCCTGTACGTTATCTTCTAGCTCCTACTAACATCTCCAATTAGACAACC
GCTTCAAAGGGTGCTTAGCACCAGGGATTGGGGTTCATGGACTTAGGAGGTGGTAAGGAAACTG
GCTGGCACCACCAAACTGCCTTAGTGAACTTGGCCCTTCCCAGGCAGGTAGGTTGGGCATTGAG
GGAAGGTGGCCCAGTCTTTCCTGGCAGGGTCTGGCCAGTCTCATGGGGGCACCACTAGTTTGGT
GACAGAAGTGGTGTCATTTATTGAATTCCACCTCCGTTTAGAAGGAGATCATGGTACAAAGCCC
AGGAGGGGGCCTTAAGATGTGAAGATCTCTCTGAATAAAAGGCAAGGGGCTTCTCTTCTTCACC
TCTGGGATAGTTGGTAGATCGGAGAGTTTTATTTTCAGGGTCAAGGCTGTGGACTGATGGGGAT
ATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATGTGTCCAGAGGGACAA
GTTTGCAGAACCTCATATTGGTATATTAAAGAAATAATAAAATAAAAAAGCACTTTAGGTTATT
TTATCTTTAACCCGATTGCTGCAATTTCTTTTGTGTGTATATATACATATATATACTTTCCACA
AAGTTTTATTTTTTGCTCAGAATAAAAAGTTAAATTGAGGTGTGAAAAGAAAAGCACTTACCTT
GGTGCAATATGTGTAGCTTGATGGTCGTTGTCCCATGTGGCCCTGGCCTGGCCGCGTTTTTCCG
CTCAATCAGCCCTGTGCTGTGAGACTGTCCATAGGGAAACACTATTATGCATTCTCAGCAACCG
CTCAATCTATGCAAGCCTTCCCTGTGTGCCCCAGGGCGCCCCCTCAGGCTCTCTGAAGAACTGC
TGTGGGTCCTGTTTTCTGCTGACTGTTGAGGCCCTTTTTCATCACTTCTTGGTCTCTCGCCATC
TTTTCCCTCTTCACCATTACAAAATGATGCCTGAAAGGAAGGAACAGATTGTTCCTAGGTAGAA
ACCTGGCACCTTCTAGACTTTTATATTTGTAATCACATCCATTGTCCTTAAAGACTTTTCCAGA
GTCATTGAAACCATTGATTTGTGGAACTGCAACAATATTTCTCAAGAGTTTACAATTGTCTTAC
ACCACCAATCAGAAATATGTTTGGGGAGGCATGGGTGGCAGGGGGCAACATGAGCCATTTCCAT
ACTGCTCCCCATACTACCTGTGTTGGTTCCTTAAGCAAAAAGGCCTCCAGCCTTCATTAAATCC
TATAAACAAACATTACATCCCATGAATCATTATCAGCTTTCTTCCTTTACTCCACCTCTCCCAT
TTTATCTTCAATTCTCAGGCTATAGAATAGACAAGTTTTAGAATATACTTCAGCCAAAGCAGAA
AGATTTTCATAGATCCAATATGCAAATAGTTCTGCTGTGACATAGATCAGAAATTGTCTGTTCC
TTAATATTTGGGGGTGGAGGCAACAAAACTGAAGCATATTTCTGATTGGTTAGCCATTTTGGCC
TGTTTCCTCTTGCATGTTTTTTAGGGAGGGAAACGGTCCTGTATTTCTTCTGATGCCCTTTGGG
GAAGCCGACGACCACTGGGCATTTCTCACTGTTACTCCTGTTCAAGAGAGGGCTTCTCAGTCTG
CACTGAAAAATGCAAATTAAACTGGATCTTTACGTCAATGTGTACATAGTACAAGCTTTTTTAC
TGGAATTGAGGTTTAAAACCACACACTGCCCTTTTGGTGGTGTGCCTGTTGGGCCAAAAATTGG
GTGATAATGTAGTGTCACTTTCTCAGCTCAATGCAGTTTCTACTTTTTCTTATGGGAAAATTTT
TCATAAAACCTTTTTGCACCAAAACCCAGGGGTGTTTTTTGCAATATCCTTGTTATCCTCGTAG
TGTGCCAAGTCAGAGGCTTTCTCTTGCCCTTTTCCTGCTGTTCTCTCAGGCCTCCCAAGGGCTG
TTTGACTCAACAGTCTACATCCTTCGTTGTGTTTTGGAGAATGTGGGGGTGGGGGTCAGAGTTC
AAGGTGTCTGTTCCCTTTTCCTGTGAACTCTTTCTAGTCCCTATTTGGGGAGGGTGGCTGGAAA
CAGATTTTTGCTGAATTTCTGGCTGAGATCTTCTAGCCAGGAAAGGCAAGAGCCCCCAAGAGCC
CTTTTTTTTGACATACACTAATCATTGGCCGGGGTCTTGGTGACAACTTTTAAAATCCCAAATA
GTTTTATTTGGATTATGTAAAAGTAAGTGTGAAACATGGGAACAACGGACTTCCACTGAGCGAT
GTGAAAACGTTACAGGTTCAGTACTTCCAAAGGAAGAAACCTCCAAACCCAAAAAAGAATAAAT
ATGAATTTGTATTTTTGAAGAATGTGAAATAATGGTGTTTGCTTAATTGCTCATTTTGTATAAA
CTTAATATTGTACTTTAAAATATCTGCTAAAAAGTGAAAATTTAACTTTTTGGAATTGAAAAAG
CAATATTAAATACTAATGAAATCCTAATTAAATGCTTATTTAAATCTGGTA

hide sequence

RefSeq Acc Id:

XM_055095195 ⟹ XP_054951170

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	1	188,978,046 - 189,027,954 (+)	NCBI
NHGRI_mPanPan1	1	188,107,196 - 188,152,667 (+)	NCBI

RefSeq Acc Id:

XM_063608681 ⟹ XP_063464751

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	1	188,977,930 - 189,027,954 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_003815530	(Get FASTA)	NCBI Sequence Viewer
	XP_054951170	(Get FASTA)	NCBI Sequence Viewer
	XP_063464751	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000020263
	ENSPPAP00000020263.1

RefSeq Acc Id:	XP_003815530 ⟸ XM_003815482
- Peptide Label:	isoform X1
- UniProtKB:	A0A2R9ASU3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGEHSPDNNIIYFEAEEDELTPDDKMLRFVDKNGLVPSSSGTVYDRTTVLIEQDPGTLEDEDDD GQCGEHLPFLVGGEEGFHLIDHEAMSQGYVQHIISPDQIHLTINPGSTPMPRNIEGATLTLQSE CPETKRKEVKRYQCTFEGCPRTYSTAGNLRTHQKTHRGEYTFVCNQEGCGKAFLTSYSLRIHVR VHTKEKPFECDVQGCEKAFNTLYRLKAHQRLHTGKTFNCESEGCSKYFTTLSDLRKHIRTHTGE KPFRCDHDGCGKAFAASHHLKTHVRTHTGERPFFCPSNGCEKTFSTQYSLKSHMKGHDNKGHSY NALPQHNGSEDTNHSLCLSDLSLLSTDSELRENSSTTQGQDLSTISPAIIFESMFQNSDDTAIQ EDPQQTASLIESFNGDAESVSDVPPSTGNSASLSLPLVLQPGLSEPPQPLLPASAPSAPPPAPS LGPGSQQAAFGNPPALLQPPEVPVPHSTQFAANHQEFLPHPQAPQPIVPGLSVVAGASASAAAV ASAVAAPAPPQSTTEPLPAMVQTLPLGANSVLTNNPTITITPTPNTAILQSSLVMGEQNLQWIL NGATSSPQNQEQIQQASKVEKVFFTTAVPVASSPGSSVQQIGLSVPVIIIKQEEACQCQCACRD SAKERASSRRKGCSSPPPPEPSPQAPDGPSLQLPAQTFSSAPVPGSSSSTMPSSCEQSRQAETP SDPQTETLSAMDVSEFLSLQSLDTPSNLIPIEALLQGEEEMGLTSSFSK hide sequence

Ensembl Acc Id:

ENSPPAP00000020263 ⟸ ENSPPAT00000043055

RefSeq Acc Id:	XP_054951170 ⟸ XM_055095195
- Peptide Label:	isoform X1
- UniProtKB:	A0A2R9ASU3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063464751 ⟸ XM_063608681
- Peptide Label:	isoform X2

Protein Domains

C2H2-type

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000033358	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000043055.1	UniProtKB/TrEMBL
Gene3D-CATH	Classic Zinc Finger	UniProtKB/TrEMBL
InterPro	GLI_C2H2-zinc-finger	UniProtKB/TrEMBL
	Znf_C2H2_sf	UniProtKB/TrEMBL
	Znf_C2H2_type	UniProtKB/TrEMBL
KEGG Report	pps:100995962	UniProtKB/TrEMBL
NCBI Gene	MTF1	ENTREZGENE
PANTHER	PTHR19818:SF131	UniProtKB/TrEMBL
	ZINC FINGER PROTEIN ZIC AND GLI	UniProtKB/TrEMBL
Pfam	zf-C2H2	UniProtKB/TrEMBL
PROSITE	ZINC_FINGER_C2H2_1	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_2	UniProtKB/TrEMBL
SMART	ZnF_C2H2	UniProtKB/TrEMBL
Superfamily-SCOP	SSF57667	UniProtKB/TrEMBL
UniProt	A0A2R9ASU3	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD