TSEN15 (tRNA splicing endonuclease subunit 15)

Gene: TSEN15 (tRNA splicing endonuclease subunit 15) Pan paniscus

Analyze

Symbol:

TSEN15

Name:

tRNA splicing endonuclease subunit 15

RGD ID:

11895754

Description:

ENCODES a protein that exhibits nucleic acid binding (inferred); INVOLVED IN tRNA processing (inferred); tRNA splicing, via endonucleolytic cleavage and ligation (inferred); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); gastrointestinal stromal tumor (ortholog); genetic disease (ortholog); FOUND IN nucleus (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

tRNA splicing endonuclease 15 homolog; tRNA-splicing endonuclease subunit Sen15

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	65,623,302 - 65,667,485 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	65,306,490 - 65,350,664 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	159,580,580 - 159,624,695 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	163,736,803 - 163,759,337 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	163,736,803 - 163,759,337 (+)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Developmental Disabilities (ISO)

gastrointestinal stromal tumor (ISO)

genetic disease (ISO)

parathyroid carcinoma (ISO)

pontocerebellar hypoplasia type 2F (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

tRNA processing (IEA)

tRNA splicing, via endonucleolytic cleavage and ligation (IEA)

Cellular Component

nucleus (IEA)

Molecular Function

nucleic acid binding (IEA)

protein binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

tRNA maturation pathway (ISO)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

TSEN15
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	65,623,302 - 65,667,485 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	65,306,490 - 65,350,664 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	159,580,580 - 159,624,695 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	163,736,803 - 163,759,337 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	163,736,803 - 163,759,337 (+)	Ensembl	panpan1.1		panPan2

TSEN15
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	184,051,730 - 184,097,485 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	184,051,651 - 184,123,978 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	184,020,864 - 184,066,619 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	182,287,469 - 182,309,969 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	180,752,502 - 180,774,999	NCBI
Celera	1	157,131,745 - 157,154,281 (+)	NCBI		Celera
Cytogenetic Map	1	q25.3	NCBI
HuRef	1	155,256,573 - 155,279,110 (+)	NCBI		HuRef
CHM1_1	1	185,443,473 - 185,466,000 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	183,414,898 - 183,460,648 (+)	NCBI		T2T-CHM13v2.0

Tsen15
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	152,246,486 - 152,262,433 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	152,246,486 - 152,262,439 (-)	Ensembl		GRCm39 Ensembl
GRCm38	1	152,370,735 - 152,386,682 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	152,370,735 - 152,386,688 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	154,217,865 - 154,233,812 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	154,132,957 - 154,148,900 (-)	NCBI		MGSCv36	mm8
Celera	1	154,791,904 - 154,807,754 (-)	NCBI		Celera
Cytogenetic Map	1	G2	NCBI
cM Map	1	64.75	NCBI

Tsen15
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	67,040,134 - 67,055,509 (-)	NCBI		GRCr8
mRatBN7.2	13	64,490,216 - 64,505,591 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	64,490,218 - 64,505,617 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	13	67,099,997 - 67,115,281 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	68,375,290 - 68,390,585 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	65,636,061 - 65,651,408 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	69,765,093 - 69,781,019 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	69,765,091 - 69,781,019 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	74,737,177 - 74,753,103 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	67,320,835 - 67,336,234 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	13	67,334,922 - 67,350,312 (-)	NCBI
Celera	13	64,402,304 - 64,417,584 (-)	NCBI		Celera
Cytogenetic Map	13	q21	NCBI

Tsen15
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955406	22,786,856 - 22,808,329 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955406	22,787,090 - 22,806,231 (+)	NCBI	ChiLan1.0	ChiLan1.0

TSEN15
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	17,356,210 - 17,441,212 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	17,356,909 - 17,405,808 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	16,943,938 - 16,975,034 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	17,091,396 - 17,122,507 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	17,091,128 - 17,140,284 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	16,998,782 - 17,029,875 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	17,107,546 - 17,138,615 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	17,238,486 - 17,269,596 (+)	NCBI		UU_Cfam_GSD_1.0

Tsen15
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	88,054,329 - 88,069,704 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936481	5,900,622 - 5,918,113 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936481	5,901,078 - 5,916,455 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TSEN15
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	125,301,165 - 125,360,687 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	125,300,273 - 125,396,965 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	137,621,602 - 137,658,589 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TSEN15
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	45,295,711 - 45,318,228 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	25	45,295,743 - 45,318,159 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666055	46,513,874 - 46,536,420 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tsen15
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624814	9,590,991 - 9,611,368 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003815609	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_003815610	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008968567	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008968568	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034942283	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034942291	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_057301937	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_057301938	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSPPAT00000038335 ⟹ ENSPPAP00000015644

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	1	163,736,803 - 163,759,337 (+)	Ensembl

RefSeq Acc Id:

ENSPPAT00000038342 ⟹ ENSPPAP00000015651

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	1	163,736,803 - 163,759,337 (+)	Ensembl

RefSeq Acc Id:

XM_003815609 ⟹ XP_003815657

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	1	65,644,928 - 65,667,485 (-)	NCBI
NHGRI_mPanPan1	1	65,328,972 - 65,350,664 (-)	NCBI
Mhudiblu_PPA_v0	1	159,580,586 - 159,603,097 (+)	NCBI
PanPan1.1	1	163,736,803 - 163,759,337 (+)	NCBI

Sequence:

show sequence

GCTGCGAGCCTCGGGGAAGCGGAACCCACAGGCGCGCGCGCCGCTGCTTCTGGCCGGGAGCGGG
TCGTGGTGCACCACGGGAGCGCCGCACCGGCCGGCATGGAGGAGCGCGGCGATTCCGAGCCGAC
CCCCGGCTGCAGCGGCCTGGGTCCGGGCGGTGTTCGCGGCTTTGGCGACGGCGGTGGAGCTCCT
TCGTGGGCCCCTGAGGACGCCTGGATGGGCACTCACCCTAAGTATCTAGAAATGATGGAATTAG
ATATAGGAGATGCCACCCAAGTTTATGTAGCGTTCTTGGTTTACCTGGACCTCATGGAAAGCAA
AAGCTGGCATGAAGTAAACTGTGTAGGATTACCAGAACTCCAGCTCATCTGCCTTGTTGGTACT
GAGATAGAAGGGGAGGGGTTACAGACTGTGGTGCCTACCCCCATCACTGCTTCCTTCAGCCATA
ACAGGATAAGGGAGATCTTGAAGGCATCTCGAAAATTGCAAGGTGATCCAGATTTGCCGATGTC
TTTTACTTTGGCCATAGTGGAGTCTGATTCTACAATAGTCTATTATAAACTTACTGATGGATTT
ATGCTGCCAGACCCTCAGAATATTTCTCTTAGAAGATGACATCCATGTTTCCTGATGCTTGTTT
TATTCATACAAGATTGGATTTGAGACCCATCAGACTGCTTCATCTTTTATCTCAGAGATAGGGT
TGACGTAGATAGTGAGGGTTGACTTCCCCATTCCATAAGGTTTTCATTCTGAAGAGTAAAACTT
CCCCAGGTAGAAGACTTTCTCCTTCTTAAAAAATATAGGGTGATTTCTTTAAAACTTTGTTATC
TAGAGACAGTTTAATTACAGTTATATACAGGTTTATGCCTAGGATGTATTCAGATGGGTGGGAC
CTGTGTGCTGCTTTTGTCATCCCACACTCAAAGTTGTCTCTTTGTTTCTTGCTGCCACTGCCAG
CTCATTGTTGAGACTGCCATTTCTTTCTCTTACTCAGCTCTCCCCAGTGCCTTTTGGCCACTGC
AGCTACCATAGAATGGCATTTTATATGTACCTTGTCACCCACTTCTGTTTACTTTTTCCTCTCC
AGTAAAAATTAAAAGATTTCTTTCAATTGGTCTTCCCATTGCAGTTACTGTTATTTCTCTTTTT
TGGTTAACTTTAAATCAAAACTCAAAATACGTTCATCCAGAGTGTGTCTTAAGTAACTTACGTG
TCTTAAGTAACAGGGACCAGAGACATGTTACCTACAAGAGTTCTGGGCCATCCTTTTCATTCTT
ATCACATATCATAGCTTGAATATTACAACAGTGTGGGAGAGAATCAACCGTAAAAATGTCTTCA
TTAATTAGACCCAGTTATTCCACTTTTGTTAATGTCTCTCAAATTGTACAAAGTATAAAAAATT
ATATGCACAAAGATGTTCCAAGTGACATTACTTTTAGTAGCCCAAATTATAAACCACTTTAAAG
TTTGGGGTAAAGATTGGCAAACTTTTTCTATAAAGGGCCAGAAAGTAACCATTTTAGGTTTTTA
AACCTACTGTCTCTGTCATAACTTGTCAACACTGCTGTATGAAGCACAAAAGCAGCCATAGACA
ACACATAAACAATACGGGCATGGCTTTGTTCCAGTAAAACTTTGTTTACAAATGTGGTGCCATA
GTTTGCCATCCCTGGGTCTAGGAAATAGTCAATAAACAGATATATACAAATGATACATAATGTA
CTTATTAAAAATTAGTAATGAATATTATTAAAAACATGAAAACATTACATTAAGTAAAAATTGC
AAGATGGAAAAGTGTATAAGTGGGTGTAATCATGGCTGAAATAACAGACCAAGCATATGATAAA
AAGATAACAAAGTAAATCAAATTACTAACTGGTTATAGTGGGATAGGAGGCAGAAAATGGATGA
CTTTGTCTTTTCTCAATGTTTTTATTTGTATTTTATAATAAAAATGTTTTAAAATTAAAA

hide sequence

RefSeq Acc Id:

XM_008968567 ⟹ XP_008966815

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	1	65,644,928 - 65,667,472 (-)	NCBI
NHGRI_mPanPan1	1	65,328,972 - 65,350,623 (-)	NCBI
Mhudiblu_PPA_v0	1	159,580,583 - 159,603,097 (+)	NCBI
PanPan1.1	1	163,736,803 - 163,759,337 (+)	NCBI

Sequence:

show sequence

GCTGCGAGCCTCGGGGAAGCGGAACCCACAGGCGCGCGCGCCGCTGCTTCTGGCCGGGAGCGGG
TCGTGGTGCACCACGGGAGCGCCGCACCGGCCGGCATGGAGGAGCGCGGCGATTCCGAGCCGAC
CCCCGGCTGCAGCGGCCTGGGTCCGGGCGGTGTTCGCGGCTTTGGCGACGGCGGTGGAGCTCCT
TCGTGGGCCCCTGAGGACGCCTGGATGGGCACTCACCCTAAGTATCTAGAAATGATGGAATTAG
ATATAGGAGATGCCACCCAAGTTTATGTAGCGTTCTTGGTTTACCTGGACCTCATGGAAAGCAA
AAGCTGGCATGAAGTAAACTGTGTAGGATTACCAGAACTCCAGCTCATCTGCCTTGTTGGTACT
GAGATAGAAGGGGAGGGGTTACAGACTGTGGTGCCTACCCCCATCACTGCTTCCTTCAGCCATA
ACAGGATAAGGGAGATCTTGAAGGCATCTCGAAAATTGCAAGGTGATCCAGATTTGCCGATGTC
TTTTACTTTGGCCATAGTGGAGTCTGATTCTACAATAGTCTATTATAAACTTACTGATGGATTT
ATGCTGCCAGACCCTCAGGTCAGTTTTGAGAATATTTCTCTTAGAAGATGACATCCATGTTTCC
TGATGCTTGTTTTATTCATACAAGATTGGATTTGAGACCCATCAGACTGCTTCATCTTTTATCT
CAGAGATAGGGTTGACGTAGATAGTGAGGGTTGACTTCCCCATTCCATAAGGTTTTCATTCTGA
AGAGTAAAACTTCCCCAGGTAGAAGACTTTCTCCTTCTTAAAAAATATAGGGTGATTTCTTTAA
AACTTTGTTATCTAGAGACAGTTTAATTACAGTTATATACAGGTTTATGCCTAGGATGTATTCA
GATGGGTGGGACCTGTGTGCTGCTTTTGTCATCCCACACTCAAAGTTGTCTCTTTGTTTCTTGC
TGCCACTGCCAGCTCATTGTTGAGACTGCCATTTCTTTCTCTTACTCAGCTCTCCCCAGTGCCT
TTTGGCCACTGCAGCTACCATAGAATGGCATTTTATATGTACCTTGTCACCCACTTCTGTTTAC
TTTTTCCTCTCCAGTAAAAATTAAAAGATTTCTTTCAATTGGTCTTCCCATTGCAGTTACTGTT
ATTTCTCTTTTTTGGTTAACTTTAAATCAAAACTCAAAATACGTTCATCCAGAGTGTGTCTTAA
GTAACTTACGTGTCTTAAGTAACAGGGACCAGAGACATGTTACCTACAAGAGTTCTGGGCCATC
CTTTTCATTCTTATCACATATCATAGCTTGAATATTACAACAGTGTGGGAGAGAATCAACCGTA
AAAATGTCTTCATTAATTAGACCCAGTTATTCCACTTTTGTTAATGTCTCTCAAATTGTACAAA
GTATAAAAAATTATATGCACAAAGATGTTCCAAGTGACATTACTTTTAGTAGCCCAAATTATAA
ACCACTTTAAAGTTTGGGGTAAAGATTGGCAAACTTTTTCTATAAAGGGCCAGAAAGTAACCAT
TTTAGGTTTTTAAACCTACTGTCTCTGTCATAACTTGTCAACACTGCTGTATGAAGCACAAAAG
CAGCCATAGACAACACATAAACAATACGGGCATGGCTTTGTTCCAGTAAAACTTTGTTTACAAA
TGTGGTGCCATAGTTTGCCATCCCTGGGTCTAGGAAATAGTCAATAAACAGATATATACAAATG
ATACATAATGTACTTATTAAAAATTAGTAATGAATATTATTAAAAACATGAAAACATTACATTA
AGTAAAAATTGCAAGATGGAAAAGTGTATAAGTGGGTGTAATCATGGCTGAAATAACAGACCAA
GCATATGATAAAAAGATAACAAAGTAAATCAAATTACTAACTGGTTATAGTGGGATAGGAGGCA
GAAAATGGATGACTTTGTCTTTTCTCAATGTTTTTATTTGTATTTTATAATAAAAATGTTTTAA
AATTAAAA

hide sequence

RefSeq Acc Id:

XM_034942283 ⟹ XP_034798174

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	1	65,623,302 - 65,667,472 (-)	NCBI
NHGRI_mPanPan1	1	65,306,490 - 65,350,624 (-)	NCBI
Mhudiblu_PPA_v0	1	159,580,580 - 159,624,695 (+)	NCBI

RefSeq Acc Id:

XM_034942291 ⟹ XP_034798182

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	1	65,623,302 - 65,667,472 (-)	NCBI
NHGRI_mPanPan1	1	65,306,490 - 65,350,624 (-)	NCBI
Mhudiblu_PPA_v0	1	159,580,580 - 159,624,695 (+)	NCBI

RefSeq Acc Id:

XM_057301937 ⟹ XP_057157920

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	1	65,644,928 - 65,667,485 (-)	NCBI
NHGRI_mPanPan1	1	65,328,972 - 65,350,622 (-)	NCBI

RefSeq Acc Id:

XM_057301938 ⟹ XP_057157921

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	1	65,644,928 - 65,667,472 (-)	NCBI
NHGRI_mPanPan1	1	65,328,972 - 65,350,622 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_003815657	(Get FASTA)	NCBI Sequence Viewer
	XP_008966815	(Get FASTA)	NCBI Sequence Viewer
	XP_034798174	(Get FASTA)	NCBI Sequence Viewer
	XP_034798182	(Get FASTA)	NCBI Sequence Viewer
	XP_057157920	(Get FASTA)	NCBI Sequence Viewer
	XP_057157921	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000015644
	ENSPPAP00000015644.1
	ENSPPAP00000015651.1

RefSeq Acc Id:	XP_008966815 ⟸ XM_008968567
- Peptide Label:	isoform X3
- UniProtKB:	A0A2R9AJ54 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEERGDSEPTPGCSGLGPGGVRGFGDGGGAPSWAPEDAWMGTHPKYLEMMELDIGDATQVYVAF LVYLDLMESKSWHEVNCVGLPELQLICLVGTEIEGEGLQTVVPTPITASFSHNRIREILKASRK LQGDPDLPMSFTLAIVESDSTIVYYKLTDGFMLPDPQVSFENISLRR hide sequence

RefSeq Acc Id:	XP_003815657 ⟸ XM_003815609
- Peptide Label:	isoform X4
- Sequence:	show sequence MEERGDSEPTPGCSGLGPGGVRGFGDGGGAPSWAPEDAWMGTHPKYLEMMELDIGDATQVYVAF LVYLDLMESKSWHEVNCVGLPELQLICLVGTEIEGEGLQTVVPTPITASFSHNRIREILKASRK LQGDPDLPMSFTLAIVESDSTIVYYKLTDGFMLPDPQNISLRR hide sequence

RefSeq Acc Id:	XP_034798174 ⟸ XM_034942283
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_034798182 ⟸ XM_034942291
- Peptide Label:	isoform X2

RefSeq Acc Id:

ENSPPAP00000015651 ⟸ ENSPPAT00000038342

RefSeq Acc Id:

ENSPPAP00000015644 ⟸ ENSPPAT00000038335

RefSeq Acc Id:	XP_057157921 ⟸ XM_057301938
- Peptide Label:	isoform X6
- UniProtKB:	A0A2R9AEB9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_057157920 ⟸ XM_057301937
- Peptide Label:	isoform X5

Protein Domains

tRNA-splicing endonuclease subunit Sen15

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000030953	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000038335.1	UniProtKB/TrEMBL
	ENSPPAT00000038342.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.1350.10	UniProtKB/TrEMBL
InterPro	tRNA-endonuc_su_Sen15	UniProtKB/TrEMBL
	tRNA_endonuc-like_dom_sf	UniProtKB/TrEMBL
	tRNA_intron_Endo_cat-like_sf	UniProtKB/TrEMBL
NCBI Gene	TSEN15	ENTREZGENE
PANTHER	TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN15	UniProtKB/TrEMBL
	TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN15	UniProtKB/TrEMBL
Pfam	Sen15	UniProtKB/TrEMBL
Superfamily-SCOP	SSF53032	UniProtKB/TrEMBL
UniProt	A0A2R9AEB9	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9AJ54	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

RGD Manual Annotations

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

RGD Manual Annotations