DMC1 (DNA meiotic recombinase 1) - Rat Genome Database

Name: DMC1
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: DMC1 (DNA meiotic recombinase 1) Pan paniscus

Analyze

Symbol:

DMC1

Name:

DNA meiotic recombinase 1

RGD ID:

11895005

Description:

ENCODES a protein that exhibits ATP binding (inferred); ATP hydrolysis activity (inferred); ATP-dependent activity, acting on DNA (inferred); INVOLVED IN gamete generation (ortholog); homologous chromosome pairing at meiosis (ortholog); male meiosis I (ortholog); ASSOCIATED WITH adenylosuccinase lyase deficiency (ortholog); azoospermia (ortholog); Emery-Dreifuss muscular dystrophy (ortholog); FOUND IN site of double-strand break (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination; meiotic recombination protein DMC1/LIM15 homolog

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	23	48,372,518 - 48,426,403 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	22	51,063,957 - 51,117,848 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	22	19,433,989 - 19,485,804 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	22	37,253,609 - 37,305,769 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	22	37,253,609 - 37,305,769 (-)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

adenylosuccinase lyase deficiency (ISO)

azoospermia (ISO)

Emery-Dreifuss muscular dystrophy (ISO)

genetic disease (ISO)

myoclonic dystonia 26 (ISO)

neurodegeneration with brain iron accumulation 2A (ISO)

primary ovarian insufficiency (ISO)

Sertoli cell-only syndrome (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

chromosome organization involved in meiotic cell cycle (IEA)

DNA metabolic process (IEA)

DNA recombinase assembly (IEA)

DNA repair (IEA)

DNA strand invasion (IEA)

double-strand break repair involved in meiotic recombination (IEA)

double-strand break repair via homologous recombination (IEA)

gamete generation (IEA,ISO)

homologous chromosome pairing at meiosis (IEA,ISO)

male meiosis I (IEA,ISO)

meiotic cell cycle (IEA)

mitotic recombination (IEA)

oocyte maturation (IEA,ISO)

oogenesis (IEA,ISO)

ovarian follicle development (IEA,ISO)

reciprocal meiotic recombination (IEA)

spermatid development (IEA,ISO)

spermatogenesis (IEA,ISO)

Cellular Component

chromosome (IEA)

chromosome, telomeric region (IEA)

condensed nuclear chromosome (IEA)

lateral element (IEA)

nucleus (IEA)

site of double-strand break (IEA,ISO)

Molecular Function

ATP binding (IEA)

ATP hydrolysis activity (IEA)

ATP-dependent activity, acting on DNA (IEA)

ATP-dependent DNA damage sensor activity (IEA)

DNA binding (IEA)

DNA strand exchange activity (IEA)

double-stranded DNA binding (IEA)

identical protein binding (IEA)

protein binding (ISO)

single-stranded DNA binding (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

DMC1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	23	48,372,518 - 48,426,403 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	22	51,063,957 - 51,117,848 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	22	19,433,989 - 19,485,804 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	22	37,253,609 - 37,305,769 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	22	37,253,609 - 37,305,769 (-)	Ensembl	panpan1.1		panPan2

DMC1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	22	38,509,147 - 38,570,183 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	22	38,518,948 - 38,570,204 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	22	38,914,953 - 38,966,188 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	22	37,244,900 - 37,296,135 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	22	37,239,453 - 37,290,689	NCBI
Celera	22	22,720,538 - 22,771,771 (-)	NCBI		Celera
Cytogenetic Map	22	q13.1	NCBI
HuRef	22	21,880,996 - 21,931,997 (-)	NCBI		HuRef
CHM1_1	22	38,873,735 - 38,925,022 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	22	38,973,412 - 39,034,483 (-)	NCBI		T2T-CHM13v2.0

Dmc1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	79,445,698 - 79,489,362 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	79,445,698 - 79,489,310 (-)	Ensembl		GRCm39 Ensembl
GRCm38	15	79,561,497 - 79,605,159 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	79,561,497 - 79,605,109 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	15	79,391,930 - 79,435,514 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	15	79,388,755 - 79,432,339 (-)	NCBI		MGSCv36	mm8
Celera	15	81,685,957 - 81,730,849 (-)	NCBI		Celera
Cytogenetic Map	15	E1	NCBI
cM Map	15	37.79	NCBI

Dmc1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	113,005,278 - 113,047,854 (-)	NCBI		GRCr8
mRatBN7.2	7	111,124,888 - 111,167,465 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	111,124,888 - 111,167,952 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	112,872,520 - 112,915,092 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	115,096,054 - 115,138,630 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	115,065,426 - 115,108,004 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	120,796,217 - 120,840,524 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	120,796,217 - 120,839,577 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	120,789,043 - 120,833,600 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	117,476,702 - 117,520,670 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	117,514,418 - 117,553,900 (+)	NCBI
Celera	7	107,456,300 - 107,498,828 (-)	NCBI		Celera
Cytogenetic Map	7	q34	NCBI

Dmc1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955413	24,684,073 - 24,724,344 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955413	24,685,311 - 24,724,269 (-)	NCBI	ChiLan1.0	ChiLan1.0

DMC1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	10	26,228,662 - 26,265,377 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	10	26,230,428 - 26,264,820 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	10	26,184,319 - 26,220,549 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	10	27,019,568 - 27,056,278 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	10	27,019,605 - 27,056,226 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	10	26,741,166 - 26,777,610 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	10	27,052,510 - 27,089,151 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	10	27,229,297 - 27,265,765 (+)	NCBI		UU_Cfam_GSD_1.0

Dmc1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	9,742,723 - 9,778,354 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936492	2,753,289 - 2,788,102 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936492	2,754,694 - 2,788,249 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

DMC1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	9,431,177 - 9,470,113 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	5	9,431,236 - 9,470,333 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	6,712,304 - 6,750,854 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

DMC1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	19	21,179,495 - 21,230,078 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	19	21,180,194 - 21,228,120 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666045	104,535,164 - 104,586,450 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Dmc1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624752	9,548,015 - 9,585,958 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624752	9,547,327 - 9,585,549 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003821593	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008975090	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008975091	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008975093	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034948627	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034948628	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034948629	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034948630	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055105714	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055105715	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055105716	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055105717	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000023	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSPPAT00000056603 ⟹ ENSPPAP00000033726

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	22	37,253,609 - 37,305,769 (-)	Ensembl

RefSeq Acc Id:

ENSPPAT00000056605 ⟹ ENSPPAP00000033728

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	22	37,253,609 - 37,305,769 (-)	Ensembl

RefSeq Acc Id:

ENSPPAT00000056609 ⟹ ENSPPAP00000033732

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	22	37,254,672 - 37,303,738 (-)	Ensembl

RefSeq Acc Id:

XM_003821593 ⟹ XP_003821641

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	23	48,372,518 - 48,426,403 (-)	NCBI
NHGRI_mPanPan1	22	51,063,957 - 51,117,848 (-)	NCBI
Mhudiblu_PPA_v0	22	19,433,989 - 19,485,753 (-)	NCBI
PanPan1.1	22	37,253,609 - 37,305,769 (-)	NCBI

Sequence:

show sequence

GCCCCTCGTCGCCCACTGTAGGCCTGCTCCCTCCCCGCCCTTCCACCCTCACCCTGCGCCCCGC
CCCGGCCCCTTGGTCCTCGCCCCGCCCTCCTCGTTTGGCGCCAAACCCTGTGGTCAACGGCGCG
CGGGTCTCCAGGCTCCGTGTTCTAGGCCGGAGTTAGAATCCTGTCAGCTGAGGAGGTCGGGCGG
GGCAGAGGGGCTTCACCTTGAAAATCTCGGGGAGACTGTGGGTACGAGGGGGAAGTGATTATTT
TTCTGTTGCTCACTTTTCAATATGAAGGAGGATCAAGTTGTGGCGGAAGAACCAGGATTCCAAG
ATGAAGAGGAATCTTTGTTTCAAGATATTGACCTGTTACAGAAACATGGAATTAACGTGGCTGA
CATTAAGAAACTGAAATCAGTAGGAATCTGTACCATCAAAGGTATACAGATGACAACAAGAAGA
GCTCTATGCAATGTCAAAGGACTCTCAGAAGCCAAAGTAGACAAGATTAAAGAGGCAGCGAACA
AACTAATTGAACCGGGATTCTTGACTGCATTTGAGTATAGTGAAAAGAGGAAAATGGTTTTCCA
TATCACCACCGGGAGCCAGGAATTTGATAAGTTGCTAGGAGGTGGAATTGAAAGTATGGCAATT
ACAGAAGCTTTTGGAGAATTTCGTACTGGAAAAACCCAGCTTTCTCATACCCTCTGTGTGACAG
CTCAACTTCCAGGAGCTGGTGGCTACCCAGGAGGAAAGATTATCTTCATTGATACAGAAAATAC
TTTCCGTCCAGATCGCCTTAGGGACATTGCTGATCGCTTTAATGTAGACCATGATGCAGTACTG
GACAACGTACTTTATGCACGTGCATATACTAGTGAACATCAGATGGAGCTACTTGATTATGTAG
CAGCAAAGTTCCATGAAGAAGCTGGCATCTTCAAGCTATTGATTATCGATTCAATAATGGCACT
TTTTCGAGTGGATTTCAGTGGCCGTGGGGAGTTGGCCGAACGGCAGCAAAAATTGGCCCAGATG
TTGTCACGACTCCAAAAAATCTCAGAAGAATATAACGTGGCTGTTTTTGTGACCAATCAAATGA
CTGCCGATCCAGGAGCAACTATGACCTTTCAGGCAGATCCCAAAAAACCCATTGGGGGACACAT
TCTGGCTCATGCTTCAACAACAAGAATAAGCTTGCGAAAGGGAAGAGGAGAGCTCAGAATTGCC
AAGATTTATGACAGTCCTGAGATGCCTGAAAATGAAGCCACCTTCGCAATAACTGCTGGAGGAA
TTGGGGATGCCAAGGAGTAGGTGGTGAATTGATGCAAATTGCTTCTTAGTGCTTATTAGGAGCT
GAAGAAATGGAAAAGCAGTCTCCAATTTCACATCTTGAAATAGAGGTTTTTTCCCACATGTTAC
TAAAGTCAGCAAAAGAGATTTAAATCTTATATTTATCTTAAAAGTCCCTGATTCATGATAACTA
TACATTGTATGTAAACTCAGGGATATGTATATGTATGTTTGTGTATGTGTTTGTGTGTGTATAC
CTGACATATATAGTAGATATATATACCTATTGAAATTCTCTCACTCTGTGTATGTATATATACC
TATGGAAAACTAGTTGTTGGGAAAGGAGTACGTGATTCCCTCCCTTTCACTTTTCAAAGTGAGC
CACTAAACAGAAAGTCTAAGAGTTCAGAAATGTCCCATTCTCCTAAGGACTTTCCCTTCACCAT
TTTTCTAGGGTACAGTGCCACTGACTTACAGAGCTAGATGTTTTTCCACAAGAGGATTTAAGGG
AGGAATGTTTATAGGACACACACACAAAAGCTCTTTCTATTTATAATATCAAACTGCATATTCA
CCTTTATAGCAACAGAAAACAGACATTAAATTAAGCCAAATTTTAAATCATTTGACTTTGACAA
GCAGAAATTACTTTTAAAAAATGTATTTATGGCTGGGCGTGGTGGCTCACACCTGTAATCCCAG
CACTTTGGGAGGCCAAGGGAGGTGGATCACTAGAGGTCAGGAGTTCAAGACCAGCCTGGCCAAC
ATGGAGAAACCCCATCTCTAGTAAAAATACAAAAATTAGCCAAGCGCAGTGGCATGTGCCTGTA
ATCCCAGCTACTCTGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCAGAGATTGCAGT
GAGCCAAGATGGCACCACTGCACTCCAGCCTAGGTGACAGAGTGAGACTCCGTCTCAAAAAAAA
AAAAAAACTTTTTTAAAAATGTTAAAATTAATTTAAATGTAAAATTTCTGAATACTAATCTTAG
AAATGTGTAAAAGATATTATTTTGATTGTTAAACAAATAAAATCCTGTTTTCAAAATGC

hide sequence

RefSeq Acc Id:

XM_008975093 ⟹ XP_008973341

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	23	48,372,518 - 48,426,399 (-)	NCBI
NHGRI_mPanPan1	22	51,063,957 - 51,117,848 (-)	NCBI
Mhudiblu_PPA_v0	22	19,433,989 - 19,485,743 (-)	NCBI
PanPan1.1	22	37,253,609 - 37,305,769 (-)	NCBI

Sequence:

show sequence

GCCCCTCGTCGCCCACTGTAGGCCTGCTCCCTCCCCGCCCTTCCACCCTCACCCTGCGCCCCGC
CCCGGCCCCTTGGTCCTCGCCCCGCCCTCCTCGTTTGGCGCCAAACCCTGTGGTCAACGGCGCG
CGGGTCTCCAGGCTCCGTGTTCTAGGCCGGAGTTAGAATCCTGTCAGCTGAGGAGGTCGGGCGG
GGCAGAGGGGCTTCACCTTGAAAATCTCGGGGAGACTGTGGGTACGAGGGGGAAGTGATTATTT
TTCTGTTGCTCACTTTTCAATATGAAGGAGGATCAAGTTGTGGCGGAAGAACCAGGATTCCAAG
ATGAAGAGGAATCTTTGTTTCAAGATATTGACCTGTTACAGAAACATGGAATTAACGTGGCTGA
CATTAAGAAACTGAAATCAGTAGGAATCTGTACCATCAAAGGTATACAGATGACAACAAGAAGA
GCTCTATGCAATGTCAAAGGACTCTCAGAAGCCAAAGTAGACAAGATTAAAGAGGCAGCGAACA
AACTAATTGAACCGGGATTCTTGACTGCATTTGAGTATAGTGAAAAGAGGAAAATGGTTTTCCA
TATCACCACCGGGAGCCAGGAATTTGATAAGTTGCTAGGAGGTGGAATTGAAAGTATGGCAATT
ACAGAAGCTTTTGGAGAATTTCGTACTGGAAAAACCCAGCTTTCTCATACCCTCTGTGGTGAAC
ATCAGATGGAGCTACTTGATTATGTAGCAGCAAAGTTCCATGAAGAAGCTGGCATCTTCAAGCT
ATTGATTATCGATTCAATAATGGCACTTTTTCGAGTGGATTTCAGTGGCCGTGGGGAGTTGGCC
GAACGGCAGCAAAAATTGGCCCAGATGTTGTCACGACTCCAAAAAATCTCAGAAGAATATAACG
TGGCTGTTTTTGTGACCAATCAAATGACTGCCGATCCAGGAGCAACTATGACCTTTCAGGCAGA
TCCCAAAAAACCCATTGGGGGACACATTCTGGCTCATGCTTCAACAACAAGAATAAGCTTGCGA
AAGGGAAGAGGAGAGCTCAGAATTGCCAAGATTTATGACAGTCCTGAGATGCCTGAAAATGAAG
CCACCTTCGCAATAACTGCTGGAGGAATTGGGGATGCCAAGGAGTAGGTGGTGAATTGATGCAA
ATTGCTTCTTAGTGCTTATTAGGAGCTGAAGAAATGGAAAAGCAGTCTCCAATTTCACATCTTG
AAATAGAGGTTTTTTCCCACATGTTACTAAAGTCAGCAAAAGAGATTTAAATCTTATATTTATC
TTAAAAGTCCCTGATTCATGATAACTATACATTGTATGTAAACTCAGGGATATGTATATGTATG
TTTGTGTATGTGTTTGTGTGTGTATACCTGACATATATAGTAGATATATATACCTATTGAAATT
CTCTCACTCTGTGTATGTATATATACCTATGGAAAACTAGTTGTTGGGAAAGGAGTACGTGATT
CCCTCCCTTTCACTTTTCAAAGTGAGCCACTAAACAGAAAGTCTAAGAGTTCAGAAATGTCCCA
TTCTCCTAAGGACTTTCCCTTCACCATTTTTCTAGGGTACAGTGCCACTGACTTACAGAGCTAG
ATGTTTTTCCACAAGAGGATTTAAGGGAGGAATGTTTATAGGACACACACACAAAAGCTCTTTC
TATTTATAATATCAAACTGCATATTCACCTTTATAGCAACAGAAAACAGACATTAAATTAAGCC
AAATTTTAAATCATTTGACTTTGACAAGCAGAAATTACTTTTAAAAAATGTATTTATGGCTGGG
CGTGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCAAGGGAGGTGGATCACTAGAGGT
CAGGAGTTCAAGACCAGCCTGGCCAACATGGAGAAACCCCATCTCTAGTAAAAATACAAAAATT
AGCCAAGCGCAGTGGCATGTGCCTGTAATCCCAGCTACTCTGGAGGCTGAGGCAGGAGAATTGC
TTGAACCCAGGAGGCAGAGATTGCAGTGAGCCAAGATGGCACCACTGCACTCCAGCCTAGGTGA
CAGAGTGAGACTCCGTCTCAAAAAAAAAAAAAAACTTTTTTAAAAATGTTAAAATTAATTTAAA
TGTAAAATTTCTGAATACTAATCTTAGAAATGTGTAAAAGATATTATTTTGATTGTTAAACAAA
TAAAATCCTGTTTTCAAAATGC

hide sequence

RefSeq Acc Id:

XM_034948627 ⟹ XP_034804518

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	23	48,372,518 - 48,426,403 (-)	NCBI
NHGRI_mPanPan1	22	51,063,957 - 51,117,848 (-)	NCBI
Mhudiblu_PPA_v0	22	19,434,592 - 19,485,753 (-)	NCBI

RefSeq Acc Id:

XM_055105714 ⟹ XP_054961689

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	23	48,372,518 - 48,426,403 (-)	NCBI
NHGRI_mPanPan1	22	51,063,957 - 51,117,848 (-)	NCBI

RefSeq Acc Id:

XM_055105715 ⟹ XP_054961690

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	23	48,372,518 - 48,426,316 (-)	NCBI
NHGRI_mPanPan1	22	51,063,957 - 51,117,848 (-)	NCBI

RefSeq Acc Id:

XM_055105716 ⟹ XP_054961691

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	23	48,372,518 - 48,426,403 (-)	NCBI
NHGRI_mPanPan1	22	51,063,957 - 51,117,848 (-)	NCBI

RefSeq Acc Id:

XM_055105717 ⟹ XP_054961692

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	23	48,372,518 - 48,426,399 (-)	NCBI
NHGRI_mPanPan1	22	51,063,957 - 51,117,848 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_003821641	(Get FASTA)	NCBI Sequence Viewer
	XP_008973341	(Get FASTA)	NCBI Sequence Viewer
	XP_034804518	(Get FASTA)	NCBI Sequence Viewer
	XP_054961689	(Get FASTA)	NCBI Sequence Viewer
	XP_054961690	(Get FASTA)	NCBI Sequence Viewer
	XP_054961691	(Get FASTA)	NCBI Sequence Viewer
	XP_054961692	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000033726
	ENSPPAP00000033726.1
	ENSPPAP00000033728
	ENSPPAP00000033728.1
	ENSPPAP00000033732.1

RefSeq Acc Id:	XP_008973341 ⟸ XM_008975093
- Peptide Label:	isoform X3
- UniProtKB:	A0A2R9BVM3 (UniProtKB/TrEMBL), A0A2R9BVM5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKEDQVVAEEPGFQDEEESLFQDIDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRALCNVKG LSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEF RTGKTQLSHTLCGEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQKLA QMLSRLQKISEEYNVAVFVTNQMTADPGATMTFQADPKKPIGGHILAHASTTRISLRKGRGELR IAKIYDSPEMPENEATFAITAGGIGDAKE hide sequence

RefSeq Acc Id:	XP_003821641 ⟸ XM_003821593
- Peptide Label:	isoform X1
- UniProtKB:	A0A2R9BW93 (UniProtKB/TrEMBL), A0A2R9BVM5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKEDQVVAEEPGFQDEEESLFQDIDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRALCNVKG LSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEF RTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDIADRFNVDHDAVLDNVLYAR AYTSEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKI SEEYNVAVFVTNQMTADPGATMTFQADPKKPIGGHILAHASTTRISLRKGRGELRIAKIYDSPE MPENEATFAITAGGIGDAKE hide sequence

RefSeq Acc Id:	XP_034804518 ⟸ XM_034948627
- Peptide Label:	isoform X1
- UniProtKB:	A0A2R9BW93 (UniProtKB/TrEMBL), A0A2R9BVM5 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSPPAP00000033726 ⟸ ENSPPAT00000056603

RefSeq Acc Id:

ENSPPAP00000033728 ⟸ ENSPPAT00000056605

RefSeq Acc Id:

ENSPPAP00000033732 ⟸ ENSPPAT00000056609

RefSeq Acc Id:	XP_054961690 ⟸ XM_055105715
- Peptide Label:	isoform X1
- UniProtKB:	A0A2R9BW93 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_054961692 ⟸ XM_055105717
- Peptide Label:	isoform X3
- UniProtKB:	A0A2R9BVM3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_054961691 ⟸ XM_055105716
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_054961689 ⟸ XM_055105714
- Peptide Label:	isoform X1
- UniProtKB:	A0A2R9BW93 (UniProtKB/TrEMBL)

Protein Domains

RecA family profile

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000039727	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000056603.1	UniProtKB/TrEMBL
	ENSPPAT00000056605.1	UniProtKB/TrEMBL
	ENSPPAT00000056609.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.300	UniProtKB/TrEMBL
	5' to 3' exonuclease, C-terminal subdomain	UniProtKB/TrEMBL
InterPro	AAA+_ATPase	UniProtKB/TrEMBL
	Dmc1	UniProtKB/TrEMBL
	DNA_recomb/repair_Rad51_C	UniProtKB/TrEMBL
	DNA_recomb/repair_RecA-like	UniProtKB/TrEMBL
	DNA_repair_Rad51/TF_NusA_a-hlx	UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/TrEMBL
	RecA_ATP-bd	UniProtKB/TrEMBL
	RecA_monomer-monomer_interface	UniProtKB/TrEMBL
KEGG Report	pps:100977598	UniProtKB/TrEMBL
NCBI Gene	DMC1	ENTREZGENE
PANTHER	MEIOTIC RECOMBINATION PROTEIN DMC1/LIM15 HOMOLOG	UniProtKB/TrEMBL
	RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER	UniProtKB/TrEMBL
Pfam	HHH_5	UniProtKB/TrEMBL
	Rad51	UniProtKB/TrEMBL
PIRSF	Rad51	UniProtKB/TrEMBL
PROSITE	RECA_2	UniProtKB/TrEMBL
	RECA_3	UniProtKB/TrEMBL
SMART	AAA	UniProtKB/TrEMBL
Superfamily-SCOP	SSF47794	UniProtKB/TrEMBL
	SSF52540	UniProtKB/TrEMBL
UniProt	A0A2R9BVM3	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9BVM5	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9BW93	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - MGI

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - MGI