MEIOSIN (meiosis initiator) - Rat Genome Database

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Gene: MEIOSIN (meiosis initiator) Pan paniscus
Analyze
Symbol: MEIOSIN
Name: meiosis initiator
RGD ID: 11894657
Description: ENCODES a protein that exhibits DNA binding (inferred); protein dimerization activity (inferred); INVOLVED IN activation of meiosis (ortholog); cellular response to retinoic acid (ortholog); meiotic cell cycle (ortholog); FOUND IN nucleus (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: basic helix-loop-helix and HMG box domain-containing protein 1; basic helix-loop-helix and HMG-box containing 1; BHMG1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22051,894,298 - 51,930,127 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11953,765,764 - 53,801,580 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01942,740,226 - 42,773,923 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11951,275,766 - 51,311,428 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1951,277,884 - 51,311,007 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleus  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
MEIOSIN
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22051,894,298 - 51,930,127 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11953,765,764 - 53,801,580 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01942,740,226 - 42,773,923 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11951,275,766 - 51,311,428 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1951,277,884 - 51,311,007 (+)Ensemblpanpan1.1panPan2
MEIOSIN
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381945,733,439 - 45,764,541 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1945,733,439 - 45,764,541 (+)EnsemblGRCh38hg38GRCh38
GRCh371946,236,697 - 46,267,799 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361950,934,794 - 50,967,602 (+)NCBINCBI36Build 36hg18NCBI36
Celera1943,049,081 - 43,073,496 (+)NCBICelera
Cytogenetic Map19q13.32NCBI
HuRef1942,672,001 - 42,691,753 (+)NCBIHuRef
CHM1_11946,246,380 - 46,266,252 (+)NCBICHM1_1
T2T-CHM13v2.01948,560,985 - 48,592,076 (+)NCBIT2T-CHM13v2.0
Meiosin
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39718,832,196 - 18,852,456 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl718,832,971 - 18,852,293 (-)EnsemblGRCm39 Ensembl
GRCm38719,098,271 - 19,118,531 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl719,099,046 - 19,118,368 (-)EnsemblGRCm38mm10GRCm38
MGSCv37719,684,395 - 19,703,717 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36718,257,568 - 18,276,890 (-)NCBIMGSCv36mm8
Celera716,509,661 - 16,529,873 (-)NCBICelera
Cytogenetic Map7A3NCBI
cM Map79.46NCBI
Meiosin
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8187,873,020 - 87,896,092 (-)NCBIGRCr8
mRatBN7.2178,744,504 - 78,768,104 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl178,744,983 - 78,764,977 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0180,004,481 - 80,028,841 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0181,272,252 - 81,296,330 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera173,211,377 - 73,235,744 (-)NCBICelera
Cytogenetic Map1q21NCBI
Meiosin
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955574193,972 - 221,497 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955574194,108 - 221,395 (+)NCBIChiLan1.0ChiLan1.0
MEIOSIN
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11109,840,667 - 109,865,886 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1109,840,173 - 109,861,205 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1109,325,208 - 109,351,048 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01110,373,740 - 110,399,132 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1110,373,291 - 110,394,314 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11110,048,898 - 110,074,750 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01109,683,556 - 109,709,401 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01110,552,815 - 110,578,212 (-)NCBIUU_Cfam_GSD_1.0
Meiosin
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934917,750,883 - 17,772,787 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049367062,105,135 - 2,119,707 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MEIOSIN
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl652,079,224 - 52,095,099 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1652,079,726 - 52,094,663 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
MEIOSIN
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1639,178,855 - 39,214,485 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl639,190,614 - 39,214,065 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607318,797,140 - 18,847,397 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Meiosin
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248327,435,090 - 7,460,171 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248327,434,741 - 7,460,148 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000062925   ⟹   ENSPPAP00000040012
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1951,277,884 - 51,311,007 (+)Ensembl
RefSeq Acc Id: XM_034944634   ⟹   XP_034800525
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22051,896,285 - 51,930,127 (+)NCBI
NHGRI_mPanPan11953,767,725 - 53,801,580 (+)NCBI
Mhudiblu_PPA_v01942,740,226 - 42,773,923 (+)NCBI
RefSeq Acc Id: XM_055103754   ⟹   XP_054959729
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22051,894,298 - 51,930,127 (+)NCBI
NHGRI_mPanPan11953,765,764 - 53,801,580 (+)NCBI
RefSeq Acc Id: XM_055103755   ⟹   XP_054959730
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22051,894,298 - 51,930,127 (+)NCBI
NHGRI_mPanPan11953,765,764 - 53,801,580 (+)NCBI
Protein Sequences
Protein RefSeqs XP_034800525 (Get FASTA)   NCBI Sequence Viewer  
  XP_054959729 (Get FASTA)   NCBI Sequence Viewer  
  XP_054959730 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000040012.1
Reference Protein Sequences
RefSeq Acc Id: XP_034800525   ⟸   XM_034944634
- Peptide Label: isoform X1
- UniProtKB: A0A2R9CNX3 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSPPAP00000040012   ⟸   ENSPPAT00000062925
RefSeq Acc Id: XP_054959729   ⟸   XM_055103754
- Peptide Label: isoform X2
- UniProtKB: A0A2R9CNX3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054959730   ⟸   XM_055103755
- Peptide Label: isoform X3
- UniProtKB: A0A2R9CNX3 (UniProtKB/TrEMBL)
Protein Domains
bHLH   HMG box


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000042669 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000062925.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.30.10 UniProtKB/TrEMBL
  4.10.280.10 UniProtKB/TrEMBL
InterPro bHLH_dom UniProtKB/TrEMBL
  HLH_DNA-bd_sf UniProtKB/TrEMBL
  HMG_box_dom UniProtKB/TrEMBL
  HMG_box_dom_sf UniProtKB/TrEMBL
NCBI Gene BHMG1 ENTREZGENE
PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED UniProtKB/TrEMBL
  MEIOSIS INITIATOR PROTEIN UniProtKB/TrEMBL
Pfam HMG_box UniProtKB/TrEMBL
PROSITE BHLH UniProtKB/TrEMBL
  HMG_BOX_2 UniProtKB/TrEMBL
SMART HMG UniProtKB/TrEMBL
Superfamily-SCOP SSF47095 UniProtKB/TrEMBL
  SSF47459 UniProtKB/TrEMBL
UniProt A0A2R9CNX3 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-07-01 MEIOSIN  meiosis initiator  BHMG1  basic helix-loop-helix and HMG-box containing 1  Symbol and/or name change 5135510 APPROVED