SLC47A1 (solute carrier family 47 member 1)

Gene: SLC47A1 (solute carrier family 47 member 1) Pan paniscus

Analyze

Symbol:

SLC47A1

Name:

solute carrier family 47 member 1

RGD ID:

11890627

Description:

ENCODES a protein that exhibits amide transmembrane transporter activity (ortholog); xenobiotic transmembrane transporter activity (ortholog); INVOLVED IN monoatomic cation transmembrane transport (ortholog); monoatomic cation transport (ortholog); organic cation transport (ortholog); PARTICIPATES IN cisplatin response pathway; metformin pharmacokinetics pathway; ASSOCIATED WITH autistic disorder (ortholog); common variable immunodeficiency 2 (ortholog); genetic disease (ortholog); FOUND IN vesicle (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

LOC100968979; multidrug and toxin extrusion protein 1

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	54,546,053 - 54,590,827 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	59,357,895 - 59,403,316 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	31,532,821 - 31,577,523 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	36,697,753 - 36,741,618 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	36,695,965 - 36,741,618 (-)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

common variable immunodeficiency 2 (ISO)

genetic disease (ISO)

Joubert syndrome 1 (ISO)

kidney disease (ISO)

Meckel Syndrome 9 (ISO)

Potocki-Lupski syndrome (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

amino acid import across plasma membrane (IEA)

L-alpha-amino acid transmembrane transport (IEA)

L-arginine import across plasma membrane (IEA)

L-arginine transmembrane transport (IEA)

monoatomic cation transmembrane transport (IEA,ISO)

monoatomic cation transport (ISO)

organic cation transport (IEA,ISO)

proton transmembrane transport (IEA)

putrescine transport (IEA)

thiamine transmembrane transport (IEA)

transmembrane transport (IEA,ISO)

xenobiotic detoxification by transmembrane export across the plasma membrane (IEA)

xenobiotic transmembrane transport (IEA)

xenobiotic transport (IEA)

Cellular Component

apical plasma membrane (IEA)

basolateral plasma membrane (IEA)

membrane (IEA)

plasma membrane (IEA)

vesicle (ISO)

Molecular Function

amide transmembrane transporter activity (ISO)

antiporter activity (IEA)

L-amino acid transmembrane transporter activity (IEA)

L-arginine transmembrane transporter activity (IEA)

organic cation transmembrane transporter activity (IEA)

polyspecific organic cation:proton antiporter activity (IEA)

protein binding (ISO)

putrescine transmembrane transporter activity (IEA)

thiamine transmembrane transporter activity (IEA)

transmembrane transporter activity (IEA)

xenobiotic transmembrane transporter activity (IEA,ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

cisplatin response pathway (ISO)

metformin pharmacokinetics pathway (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

SLC47A1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	54,546,053 - 54,590,827 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	59,357,895 - 59,403,316 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	31,532,821 - 31,577,523 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	36,697,753 - 36,741,618 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	36,695,965 - 36,741,618 (-)	Ensembl	panpan1.1		panPan2

SLC47A1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	19,533,854 - 19,579,034 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	19,495,385 - 19,579,034 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	19,437,167 - 19,482,347 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	19,377,759 - 19,422,938 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	17	16,849,963 - 16,895,249 (+)	NCBI		Celera
Cytogenetic Map	17	p11.2	NCBI
HuRef	17	18,816,528 - 18,861,586 (+)	NCBI		HuRef
CHM1_1	17	19,446,156 - 19,491,334 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	17	19,482,011 - 19,527,180 (+)	NCBI		T2T-CHM13v2.0

Slc47a1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	61,234,226 - 61,269,668 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	61,234,227 - 61,269,171 (-)	Ensembl		GRCm39 Ensembl
GRCm38	11	61,343,400 - 61,378,842 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	61,343,401 - 61,378,345 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	61,156,902 - 61,191,577 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	61,159,595 - 61,194,259 (-)	NCBI		MGSCv36	mm8
MGSCv36	11	61,773,092 - 61,807,757 (-)	NCBI		MGSCv36	mm8
Cytogenetic Map	11	B2	NCBI
cM Map	11	37.96	NCBI

Slc47a1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	46,533,580 - 46,590,128 (-)	NCBI		GRCr8
mRatBN7.2	10	46,034,115 - 46,088,617 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	46,034,122 - 46,087,637 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	50,738,327 - 50,772,534 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	50,228,852 - 50,263,054 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	45,732,272 - 45,766,477 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	47,631,425 - 47,685,379 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	47,632,192 - 47,666,921 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	47,405,592 - 47,440,116 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	47,514,258 - 47,548,353 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	47,526,815 - 47,561,996 (-)	NCBI
Celera	10	45,287,837 - 45,321,882 (-)	NCBI		Celera
Cytogenetic Map	10	q22	NCBI

SLC47A1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	40,643,420 - 40,679,130 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	40,642,784 - 40,679,946 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	40,784,775 - 40,821,055 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	40,751,334 - 40,787,406 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	40,750,862 - 40,788,216 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	40,719,937 - 40,756,209 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	40,666,150 - 40,702,838 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	40,858,535 - 40,895,055 (-)	NCBI		UU_Cfam_GSD_1.0

SLC47A1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	60,021,188 - 60,056,938 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	60,021,176 - 60,114,488 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

SLC47A1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	18,124,681 - 18,168,702 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	18,125,252 - 18,169,552 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666059	2,677,293 - 2,726,316 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slc47a1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624849	5,776,180 - 5,830,871 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624849	5,775,925 - 5,831,941 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003807275	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008959366	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008959367	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063599226	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000019	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSPPAT00000064744 ⟹ ENSPPAP00000041818

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	17	36,695,965 - 36,741,618 (-)	Ensembl

RefSeq Acc Id:

ENSPPAT00000064747 ⟹ ENSPPAP00000041821

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	17	36,695,965 - 36,741,618 (-)	Ensembl

RefSeq Acc Id:

ENSPPAT00000064753 ⟹ ENSPPAP00000041827

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	17	36,698,673 - 36,741,522 (-)	Ensembl

RefSeq Acc Id:

ENSPPAT00000064754 ⟹ ENSPPAP00000041828

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	17	36,699,233 - 36,741,522 (-)	Ensembl

RefSeq Acc Id:

ENSPPAT00000064755 ⟹ ENSPPAP00000041829

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	17	36,699,233 - 36,727,732 (-)	Ensembl

RefSeq Acc Id:

ENSPPAT00000064757 ⟹ ENSPPAP00000041831

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	17	36,699,450 - 36,741,522 (-)	Ensembl

RefSeq Acc Id:

XM_003807275 ⟹ XP_003807323

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	19	54,546,053 - 54,590,827 (+)	NCBI
NHGRI_mPanPan1	17	59,357,895 - 59,403,314 (+)	NCBI
Mhudiblu_PPA_v0	17	31,532,821 - 31,577,523 (-)	NCBI
PanPan1.1	17	36,697,753 - 36,741,618 (-)	NCBI

Sequence:

show sequence

TCTGGGCGGGCGGCCGGGCGGGGACTGCAGAGCAGGCTGCGCTGCGCGGTACCCACTGCCGGCC
TCCGCGCTACCCGGCCGCAGCGCGCGAGTCACATGGAGGCTCCTGAGGAGCCCGCGCCAGTGCG
CGGAGGCCCGGAGGCCACCCTTGAGGTCCATGGGTCGCGCTGCCTGCGGCTGTCCGCCTTCCGA
GAAGAGCTGCGGGCGCTCTTGGTCCTGGCTGGCCCCGCGTTCTTGGTTCAGCTGATGGTGTTCC
TGATCAGCTTCATAAGCTCCGTGTTCTGTGGCCACCTGGGCAAGCTGGAGCTGGATGCAGTCAC
GCTGGCGATTGCGGTTATCAATGTCACTGGTGTCTCAGTGGGATTCGGCTTATCTTCTGCCTGT
GACACCCTCATCTCCCAGACGTATGGGAGCCAGAACCTGAAGCACGTGGGCGTGATCCTGCAGC
GGAGTGCGCTCATCCTGCTCCTCTGCTGCTTCCCCTGCTGGGCACTCTTTCTCAACACCCAGCA
CATCCTGCTGCTCTTCAGGCAGGACCCAGATGTGTCCAGGCTTACCCAGACCTATGTCACGATC
TTCATTCCAGCTCTTCCTGCAACCTTTCTTTATATGTTACAAGTTAAATATTTGCTCAACCAGG
GAATTGTACTGCCCCAGATCGTAACTGGAGTTGCAGCCAACCTTGTCAATGCCCTCGCCAACTA
TCTGTTTCTCCATCAACTGCATCTTGGGGTGATAGGCTCTGCACTGGCAAACTTGATTTCCCAG
TACACCCTGGCTCTACTCCTCTTTCTCTACATCCTCGGGAAAAAACTGCATCAAGCTACATGGG
GAGGCTGGTCCCTCGAGTGCCTGCAGGACTGGGCCTCCTTCCTCCGCCTGGCCGTCCCCAGCAT
GCTCATGCTGTGCATGGAGTGGTGGGCCTATGAGGTCGGGAGCTTCCTCAGTGGCATCCTCGGC
ATGGTGGAGCTGGGCGCTCAGTCCATCGTGTATGAACTGGCCATCATTGTGTACATGGTCCCTG
CAGGCTTCAGTGTGGCTGCCAGTGTCCGGGTAGGAAACGCTCTGGGTGCTGGAGACATGGAGCA
GGCACGGAAGTCCTCTACCGTTTCCCTGCTGATTACAGTGCTCTTTGCTGTAGCCTTCAGTGTC
CTGCTGTTAAGCTGTAAGGATCACGTGGGGTACATTTTTACTACCGACCGAGACATCATTAATC
TGGTGGCTCAGGTGGTTCCAATTTATGCTGTTTCCCACCTCTTTGAAGCTCTTGCTTGCACGAG
TGGTGGCGTTCTGAGGGGGAGTGGAAATCAGAAGGTTGGAGCCATTGTGAATACCATTGGGTAC
TATGTGGTTGGCCTCCCCATCGGGATCGTGCTGATGTTTGCAACCACACTTGGAGTGATGGGTC
TGTGGTCAGGGATCATCATCTGTACAGTCTTTCAAGCTGTGTGTTTTCTAGGCTTTATTATTCA
GCTAAATTGGAAAAAAGCCTGTCAGCAGGCTCAGGTACACGCCAATTTGAAAGTAAACAACGTG
CCTCGGAGTGGGAATTCTGCTGTCCCTCAGGATCCGCTTCACCCAGGGTGCCCTGAAAACCTTG
AAGGAATTTTAACGAACGATGTTGGAAAGACAGGCGAGCCTCAGTCAGATCAGCAGATGCGCCA
AGAAGAACCTTTGCCGGAACATCCACAGGACGGCGCTAAATTGTCCAGGAAACAGCTGGTGCTG
CGGCGAGGGCTTCTGCTCCTGGGGGTCTTCTTAATCTTGCTGGTGGGGATTTTAGTGAGGTTCT
ATGTCAGAATTCAGTGATGTGGCAGGAAAGAAAGTCAGGTCAAGTGATGCTTTTGAGCTTACAC
ACAATTCACAGGCCCACCAGTGACAATTTACTTTGAGTTAATGTCATTCAGGTGTGCCCATGGA
TTTTGAGGGCTGGGAATGCAAAGACACATTTTTCTATAAAAAGAAAAAGCAACTAAGGTTAAAA
GCTATATTGTGGCCCAAGACACTGTCTGAAAGATGACATGAGTAGTAATTCACCACTATCTGAA
CCAAGCAAGGATCAATGTGCTGACTGCATTGGCCAATGGCTTTGATACTTCTGCTATTTTTTTA
GACACAAACCCATAAACTAAGTGCTTAAGAATTCATACTGCTTGAATTATGTAAAATATATTTT
ACAGTATATCTTTCCTTGGGCCTTAGATTACTATTCACTGAGCAAATGGTATTTGTTTTTGTTT
TAACTTTTTTTTAATAGACGGAAGTCTTGCTTTGTCATGCAGGCTGGAGTGCGGTGGTGCGATC
ATAGCTCACTGCAGCCTGGAACTCTTGGGCTTCAAGCAATCCTCCTGTGTCAGCCACCAGAGTA
GCTGAGACTACAGGGGTATGCCACCATGCCCAGCTGGCATTTGTTAATCTTCATTTGAGGTCTA
GATCTAGGCACCGTGGGCACTGAAAAACAGTTGGGAAATCTTTCGAGCTGTGGAAATCCAAACA
AGGACTGATAATTCCTGGTAGGGGTGTGTGCATGACCTACTGCAGCCTCAACCTCCTGGGCTCA
AGTGATCCTCCCACCTCAGCCTCCTGAGTAGCTGAGACCACAGGCGTGTGCCACCACGCCTAGC
TAATTTTTTATATCAGGGTCTACCCTTTGTTTTCCAGGCTGGTCTTGAATTCCTGGGATCAAGC
AATCCTTCCACCTTGCCCTCCCAAAGTGTTGGGATTATAGGCATGAGCCACCACGACTGGCCAG
AGGACAAAATTTTAATAAAGGTCTTAGCTTAAGCAGTAATCCTACTTCATTAAGCCTTCCTGGG
GTGCGGTACACACCGTTAATTCAGCAACCCTCAGTACATACTAAGTATGCTCAGTGCTGTGAAA
GTGGATTACACCAAATTAAGTCATTCTTATCACACCCAATCAAAAGTTAAGAAGCCAGGGATAA
AAGCACCTCAGGCACATAACATTAATCTAGTAATGTAATTCTCTGCACATCCAGCTGGTGAAAC
TGTGTGCTGTAAGCTGGGACCAGCTTTATCCATAACTGCTGAGATAACTTGCTGAAGCTCTAGG
AATAATTTTGCCTGCCCGGTTGCTCACCAGTTGTAGCTTGCCAGCTCCCAGCACCCTTCCTGGT
GCCAATAAACTTTCTCAAAGAGCAATACTGACATTTCTTTTGATAAAACCTCCAGCCTTCTCTG
TGTTGTTCCGACATACCGAGGACCAACTGGTCTACATGGATGCCCTGAACATGCAATTCTTTCT
TCCAAAATAAAACATTAAATAGAGA

hide sequence

RefSeq Acc Id:

XM_008959366 ⟹ XP_008957614

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	19	54,546,053 - 54,590,827 (+)	NCBI
NHGRI_mPanPan1	17	59,357,895 - 59,403,316 (+)	NCBI
Mhudiblu_PPA_v0	17	31,532,821 - 31,577,523 (-)	NCBI
PanPan1.1	17	36,697,753 - 36,741,618 (-)	NCBI

Sequence:

show sequence

TCTGGGCGGGCGGCCGGGCGGGGACTGCAGAGCAGGCTGCGCTGCGCGGTACCCACTGCCGGCC
TCCGCGCTACCCGGCCGCAGCGCGCGAGTCACATGGAGGCTCCTGAGGAGCCCGCGCCAGTGCG
CGGAGGCCCGGAGGCCACCCTTGAGGTCCATGGGTCGCGCTGCCTGCGGCTGTCCGCCTTCCGA
GAAGAGCTGCGGGCGCTCTTGGTCCTGGCTGGCCCCGCGTTCTTGGTTCAGCTGATGGTGTTCC
TGATCAGCTTCATAAGCTCCGTGTTCTGTGGCCACCTGGGCAAGCTGGAGCTGGATGCAGTCAC
GCTGGCGATTGCGGTTATCAATGTCACTGGTGTCTCAGTGGGATTCGGCTTATCTTCTGCCTGT
GACACCCTCATCTCCCAGACGTATGGGAGCCAGAACCTGAAGCACGTGGGCGTGATCCTGCAGC
GGAGTGCGCTCATCCTGCTCCTCTGCTGCTTCCCCTGCTGGGCACTCTTTCTCAACACCCAGCA
CATCCTGCTGCTCTTCAGGCAGGACCCAGATGTGTCCAGGCTTACCCAGACCTATGTCACGATC
TTCATTCCAGCTCTTCCTGCAACCTTTCTTTATATGTTACAAGTTAAATATTTGCTCAACCAGG
GAATTGTACTGCCCCAGATCGTAACTGGAGTTGCAGCCAACCTTGTCAATGCCCTCGCCAACTA
TCTGTTTCTCCATCAACTGCATCTTGGGGTGATAGGCTCTGCACTGGCAAACTTGATTTCCCAG
TACACCCTGGCTCTACTCCTCTTTCTCTACATCCTCGGGAAAAAACTGCATCAAGCTACATGGG
GAGGCTGGTCCCTCGAGTGCCTGCAGGACTGGGCCTCCTTCCTCCGCCTGGCCGTCCCCAGCAT
GCTCATGCTGTGCATGGAGTGGTGGGCCTATGAGGTCGGGAGCTTCCTCAGTGGCATCCTCGGC
ATGGTGGAGCTGGGCGCTCAGTCCATCGTGTATGAACTGGCCATCATTGTGTACATGGTCCCTG
CAGGCTTCAGTGTGGCTGCCAGTGTCCGGGTAGGAAACGCTCTGGGTGCTGGAGACATGGAGCA
GGCACGGAAGTCCTCTACCGTTTCCCTGCTGATTACAGTGCTCTTTGCTGTAGCCTTCAGTGTC
CTGCTGTTAAGCTGTAAGGATCACGTGGGGTACATTTTTACTACCGACCGAGACATCATTAATC
TGGTGGCTCAGGTGGTTCCAATTTATGCTGTTTCCCACCTCTTTGAAGCTCTTGCTTGCACGAG
TGGTGGCGTTCTGAGGGGGAGTGGAAATCAGAAGGTTGGAGCCATTGTGAATACCATTGGGTAC
TATGTGGTTGGCCTCCCCATCGGGATCGTGCTGATGTTTGCAACCACACTTGGAGTGATGGGGT
GCCCTGAAAACCTTGAAGGAATTTTAACGAACGATGTTGGAAAGACAGGCGAGCCTCAGTCAGA
TCAGCAGATGCGCCAAGAAGAACCTTTGCCGGAACATCCACAGGACGGCGCTAAATTGTCCAGG
AAACAGCTGGTGCTGCGGCGAGGGCTTCTGCTCCTGGGGGTCTTCTTAATCTTGCTGGTGGGGA
TTTTAGTGAGGTTCTATGTCAGAATTCAGTGATGTGGCAGGAAAGAAAGTCAGGTCAAGTGATG
CTTTTGAGCTTACACACAATTCACAGGCCCACCAGTGACAATTTACTTTGAGTTAATGTCATTC
AGGTGTGCCCATGGATTTTGAGGGCTGGGAATGCAAAGACACATTTTTCTATAAAAAGAAAAAG
CAACTAAGGTTAAAAGCTATATTGTGGCCCAAGACACTGTCTGAAAGATGACATGAGTAGTAAT
TCACCACTATCTGAACCAAGCAAGGATCAATGTGCTGACTGCATTGGCCAATGGCTTTGATACT
TCTGCTATTTTTTTAGACACAAACCCATAAACTAAGTGCTTAAGAATTCATACTGCTTGAATTA
TGTAAAATATATTTTACAGTATATCTTTCCTTGGGCCTTAGATTACTATTCACTGAGCAAATGG
TATTTGTTTTTGTTTTAACTTTTTTTTAATAGACGGAAGTCTTGCTTTGTCATGCAGGCTGGAG
TGCGGTGGTGCGATCATAGCTCACTGCAGCCTGGAACTCTTGGGCTTCAAGCAATCCTCCTGTG
TCAGCCACCAGAGTAGCTGAGACTACAGGGGTATGCCACCATGCCCAGCTGGCATTTGTTAATC
TTCATTTGAGGTCTAGATCTAGGCACCGTGGGCACTGAAAAACAGTTGGGAAATCTTTCGAGCT
GTGGAAATCCAAACAAGGACTGATAATTCCTGGTAGGGGTGTGTGCATGACCTACTGCAGCCTC
AACCTCCTGGGCTCAAGTGATCCTCCCACCTCAGCCTCCTGAGTAGCTGAGACCACAGGCGTGT
GCCACCACGCCTAGCTAATTTTTTATATCAGGGTCTACCCTTTGTTTTCCAGGCTGGTCTTGAA
TTCCTGGGATCAAGCAATCCTTCCACCTTGCCCTCCCAAAGTGTTGGGATTATAGGCATGAGCC
ACCACGACTGGCCAGAGGACAAAATTTTAATAAAGGTCTTAGCTTAAGCAGTAATCCTACTTCA
TTAAGCCTTCCTGGGGTGCGGTACACACCGTTAATTCAGCAACCCTCAGTACATACTAAGTATG
CTCAGTGCTGTGAAAGTGGATTACACCAAATTAAGTCATTCTTATCACACCCAATCAAAAGTTA
AGAAGCCAGGGATAAAAGCACCTCAGGCACATAACATTAATCTAGTAATGTAATTCTCTGCACA
TCCAGCTGGTGAAACTGTGTGCTGTAAGCTGGGACCAGCTTTATCCATAACTGCTGAGATAACT
TGCTGAAGCTCTAGGAATAATTTTGCCTGCCCGGTTGCTCACCAGTTGTAGCTTGCCAGCTCCC
AGCACCCTTCCTGGTGCCAATAAACTTTCTCAAAGAGCAATACTGACATTTCTTTTGATAAAAC
CTCCAGCCTTCTCTGTGTTGTTCCGACATACCGAGGACCAACTGGTCTACATGGATGCCCTGAA
CATGCAATTCTTTCTTCCAAAATAAAACATTAAATAGAGA

hide sequence

RefSeq Acc Id:

XM_008959367 ⟹ XP_008957615

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	19	54,546,053 - 54,590,827 (+)	NCBI
NHGRI_mPanPan1	17	59,357,895 - 59,403,315 (+)	NCBI
Mhudiblu_PPA_v0	17	31,534,386 - 31,577,523 (-)	NCBI
PanPan1.1	17	36,699,224 - 36,741,618 (-)	NCBI

Sequence:

show sequence

TCTGGGCGGGCGGCCGGGCGGGGACTGCAGAGCAGGCTGCGCTGCGCGGTACCCACTGCCGGCC
TCCGCGCTACCCGGCCGCAGCGCGCGAGTCACATGGAGGCTCCTGAGGAGCCCGCGCCAGTGCG
CGGAGGCCCGGAGGCCACCCTTGAGGTCCATGGGTCGCGCTGCCTGCGGCTGTCCGCCTTCCGA
GAAGAGCTGCGGGCGCTCTTGGTCCTGGCTGGCCCCGCGTTCTTGGTTCAGCTGATGGTGTTCC
TGATCAGCTTCATAAGCTCCGTGTTCTGTGGCCACCTGGGCAAGCTGGAGCTGGATGCAGTCAC
GCTGGCGATTGCGGTTATCAATGTCACTGGTGTCTCAGTGGGATTCGGCTTATCTTCTGCCTGT
GACACCCTCATCTCCCAGACGTATGGGAGCCAGAACCTGAAGCACGTGGGCGTGATCCTGCAGC
GGAGTGCGCTCATCCTGCTCCTCTGCTGCTTCCCCTGCTGGGCACTCTTTCTCAACACCCAGCA
CATCCTGCTGCTCTTCAGGCAGGACCCAGATGTGTCCAGGCTTACCCAGACCTATGTCACGATC
TTCATTCCAGCTCTTCCTGCAACCTTTCTTTATATGTTACAAGTTAAATATTTGCTCAACCAGG
GAATTGTACTGCCCCAGATCGTAACTGGAGTTGCAGCCAACCTTGTCAATGCCCTCGCCAACTA
TCTGTTTCTCCATCAACTGCATCTTGGGGTGATAGGCTCTGCACTGGCAAACTTGATTTCCCAG
TACACCCTGGCTCTACTCCTCTTTCTCTACATCCTCGGGAAAAAACTGCATCAAGCTACATGGG
GAGGCTGGTCCCTCGAGTGCCTGCAGGACTGGGCCTCCTTCCTCCGCCTGGCCGTCCCCAGCAT
GCTCATGCTGTGCATGGAGTGGTGGGCCTATGAGGTCGGGAGCTTCCTCAGTGGCATCCTCGGC
ATGGTGGAGCTGGGCGCTCAGTCCATCGTGTATGAACTGGCCATCATTGTGTACATGGTCCCTG
CAGGCTTCAGTGTGGCTGCCAGTGTCCGGGTAGGAAACGCTCTGGGTGCTGGAGACATGGAGCA
GGCACGGAAGTCCTCTACCGTTTCCCTGCTGATTACAGTGCTCTTTGCTGTAGCCTTCAGTGTC
CTGCTGTTAAGCTGTAAGGATCACGTGGGGTACATTTTTACTACCGACCGAGACATCATTAATC
TGGTGGCTCAGGTGGTTCCAATTTATGCTGTTTCCCACCTCTTTGAAGCTCTTGCTTGCACGAG
TGGTGGCGTTCTGAGGGGGAGTGGAAATCAGAAGGTTGGAGCCATTGTGAATACCATTGGGTAC
TATGTGGTTGGCCTCCCCATCGGGATCGTGCTGATGTTTGCAACCACACTTGGAGTGATGGGCT
CAGGTACACGCCAATTTGAAAGTAAACAACGTGCCTCGGAGTGGGAATTCTGCTGTCCCTCAGG
ATCCGCTTCACCCAGGGTGCCCTGAAAACCTTGAAGGAATTTTAACGAACGATGTTGGAAAGAC
AGGCGAGCCTCAGTCAGATCAGCAGATGCGCCAAGAAGAACCTTTGCCGGAACATCCACAGGAC
GGCGCTAAATTGTCCAGGAAACAGCTGGTGCTGCGGCGAGGGCTTCTGCTCCTGGGGGTCTTCT
TAATCTTGCTGGTGGGGATTTTAGTGAGGTTCTATGTCAGAATTCAGTGATGTGGCAGG

hide sequence

RefSeq Acc Id:

XM_063599226 ⟹ XP_063455296

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	19	54,546,053 - 54,584,577 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_003807323	(Get FASTA)	NCBI Sequence Viewer
	XP_008957614	(Get FASTA)	NCBI Sequence Viewer
	XP_008957615	(Get FASTA)	NCBI Sequence Viewer
	XP_063455296	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000041818.1
	ENSPPAP00000041821.1
	ENSPPAP00000041827.1
	ENSPPAP00000041828.1
	ENSPPAP00000041829.1
	ENSPPAP00000041831.1

RefSeq Acc Id:

XP_008957614 ⟸ XM_008959366

- Peptide Label:

isoform X2

- Sequence:

show sequence

MEAPEEPAPVRGGPEATLEVHGSRCLRLSAFREELRALLVLAGPAFLVQLMVFLISFISSVFCG
HLGKLELDAVTLAIAVINVTGVSVGFGLSSACDTLISQTYGSQNLKHVGVILQRSALILLLCCF
PCWALFLNTQHILLLFRQDPDVSRLTQTYVTIFIPALPATFLYMLQVKYLLNQGIVLPQIVTGV
AANLVNALANYLFLHQLHLGVIGSALANLISQYTLALLLFLYILGKKLHQATWGGWSLECLQDW
ASFLRLAVPSMLMLCMEWWAYEVGSFLSGILGMVELGAQSIVYELAIIVYMVPAGFSVAASVRV
GNALGAGDMEQARKSSTVSLLITVLFAVAFSVLLLSCKDHVGYIFTTDRDIINLVAQVVPIYAV
SHLFEALACTSGGVLRGSGNQKVGAIVNTIGYYVVGLPIGIVLMFATTLGVMGCPENLEGILTN
DVGKTGEPQSDQQMRQEEPLPEHPQDGAKLSRKQLVLRRGLLLLGVFLILLVGILVRFYVRIQ

hide sequence

RefSeq Acc Id:

XP_003807323 ⟸ XM_003807275

- Peptide Label:

isoform X1

- Sequence:

show sequence

MEAPEEPAPVRGGPEATLEVHGSRCLRLSAFREELRALLVLAGPAFLVQLMVFLISFISSVFCG
HLGKLELDAVTLAIAVINVTGVSVGFGLSSACDTLISQTYGSQNLKHVGVILQRSALILLLCCF
PCWALFLNTQHILLLFRQDPDVSRLTQTYVTIFIPALPATFLYMLQVKYLLNQGIVLPQIVTGV
AANLVNALANYLFLHQLHLGVIGSALANLISQYTLALLLFLYILGKKLHQATWGGWSLECLQDW
ASFLRLAVPSMLMLCMEWWAYEVGSFLSGILGMVELGAQSIVYELAIIVYMVPAGFSVAASVRV
GNALGAGDMEQARKSSTVSLLITVLFAVAFSVLLLSCKDHVGYIFTTDRDIINLVAQVVPIYAV
SHLFEALACTSGGVLRGSGNQKVGAIVNTIGYYVVGLPIGIVLMFATTLGVMGLWSGIIICTVF
QAVCFLGFIIQLNWKKACQQAQVHANLKVNNVPRSGNSAVPQDPLHPGCPENLEGILTNDVGKT
GEPQSDQQMRQEEPLPEHPQDGAKLSRKQLVLRRGLLLLGVFLILLVGILVRFYVRIQ

hide sequence

RefSeq Acc Id:

XP_008957615 ⟸ XM_008959367

- Peptide Label:

isoform X3

- Sequence:

show sequence

MEAPEEPAPVRGGPEATLEVHGSRCLRLSAFREELRALLVLAGPAFLVQLMVFLISFISSVFCG
HLGKLELDAVTLAIAVINVTGVSVGFGLSSACDTLISQTYGSQNLKHVGVILQRSALILLLCCF
PCWALFLNTQHILLLFRQDPDVSRLTQTYVTIFIPALPATFLYMLQVKYLLNQGIVLPQIVTGV
AANLVNALANYLFLHQLHLGVIGSALANLISQYTLALLLFLYILGKKLHQATWGGWSLECLQDW
ASFLRLAVPSMLMLCMEWWAYEVGSFLSGILGMVELGAQSIVYELAIIVYMVPAGFSVAASVRV
GNALGAGDMEQARKSSTVSLLITVLFAVAFSVLLLSCKDHVGYIFTTDRDIINLVAQVVPIYAV
SHLFEALACTSGGVLRGSGNQKVGAIVNTIGYYVVGLPIGIVLMFATTLGVMGSGTRQFESKQR
ASEWEFCCPSGSASPRVP

hide sequence

RefSeq Acc Id:

ENSPPAP00000041831 ⟸ ENSPPAT00000064757

RefSeq Acc Id:

ENSPPAP00000041829 ⟸ ENSPPAT00000064755

RefSeq Acc Id:

ENSPPAP00000041827 ⟸ ENSPPAT00000064753

RefSeq Acc Id:

ENSPPAP00000041828 ⟸ ENSPPAT00000064754

RefSeq Acc Id:

ENSPPAP00000041821 ⟸ ENSPPAT00000064747

RefSeq Acc Id:

ENSPPAP00000041818 ⟸ ENSPPAT00000064744

RefSeq Acc Id:	XP_063455296 ⟸ XM_063599226
- Peptide Label:	isoform X4

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000043503	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000064744.1	UniProtKB/TrEMBL
	ENSPPAT00000064747.1	UniProtKB/TrEMBL
	ENSPPAT00000064753.1	UniProtKB/TrEMBL
	ENSPPAT00000064754.1	UniProtKB/TrEMBL
	ENSPPAT00000064755.1	UniProtKB/TrEMBL
	ENSPPAT00000064757.1	UniProtKB/TrEMBL
InterPro	MATE_euk	UniProtKB/TrEMBL
	MATE_fam	UniProtKB/TrEMBL
KEGG Report	pps:100968979	UniProtKB/TrEMBL
NCBI Gene	SLC47A1	ENTREZGENE
PANTHER	MULTIDRUG AND TOXIN EXTRUSION PROTEIN 1	UniProtKB/TrEMBL
	MULTIDRUG RESISTANCE PROTEIN	UniProtKB/TrEMBL
Pfam	MatE	UniProtKB/TrEMBL
UniProt	A0A2R9CIM8_PANPA	UniProtKB/TrEMBL
	A0A2R9CIP1_PANPA	UniProtKB/TrEMBL
	A0A2R9CIQ6_PANPA	UniProtKB/TrEMBL
	A0A2R9CLD6_PANPA	UniProtKB/TrEMBL
	A0A2R9CLE6_PANPA	UniProtKB/TrEMBL
	A0A2R9CRX8_PANPA	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2020-07-01	SLC47A1	solute carrier family 47 member 1	LOC100968979	multidrug and toxin extrusion protein 1	Symbol and/or name change	5135510	APPROVED
2018-05-08	LOC100968979	multidrug and toxin extrusion protein 1	SLC47A1	solute carrier family 47 member 1	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

RGD Manual Annotations