LAMB2 (laminin subunit beta 2) - Rat Genome Database
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Gene: LAMB2 (laminin subunit beta 2) Pan paniscus
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Symbol: LAMB2
Name: laminin subunit beta 2
RGD ID: 11889569
Description: ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN astrocyte development (ortholog); axon extension involved in regeneration (ortholog); axon guidance (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2P (ortholog); cognitive disorder (ortholog); Diabetic Nephropathies (ortholog); FOUND IN basement membrane (ortholog); laminin complex (ortholog); laminin-3 complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: laminin subunit beta-2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1350,125,348 - 50,137,258 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl350,125,460 - 50,137,074 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0349,045,419 - 49,057,340 (-)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Comparative Map Data
LAMB2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1350,125,348 - 50,137,258 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl350,125,460 - 50,137,074 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0349,045,419 - 49,057,340 (-)NCBIMhudiblu_PPA_v0panPan3
LAMB2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl349,121,114 - 49,133,118 (-)EnsemblGRCh38hg38GRCh38
GRCh38349,121,114 - 49,133,066 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37349,158,547 - 49,170,483 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36349,133,551 - 49,145,603 (-)NCBINCBI36hg18NCBI36
Build 34349,133,551 - 49,145,603NCBI
Celera349,115,499 - 49,127,552 (-)NCBI
Cytogenetic Map3p21.31NCBI
HuRef349,217,083 - 49,229,135 (-)NCBIHuRef
CHM1_1349,111,294 - 49,123,346 (-)NCBICHM1_1
Lamb2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399108,357,046 - 108,367,729 (+)NCBIGRCm39mm39
GRCm39 Ensembl9108,356,935 - 108,367,729 (+)Ensembl
GRCm389108,479,847 - 108,490,530 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9108,479,736 - 108,490,530 (+)EnsemblGRCm38mm10GRCm38
MGSCv379108,382,193 - 108,392,861 (+)NCBIGRCm37mm9NCBIm37
MGSCv369108,338,049 - 108,348,632 (+)NCBImm8
Celera9108,089,281 - 108,099,994 (+)NCBICelera
Cytogenetic Map9F2NCBI
cM Map959.4NCBI
Lamb2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.28109,178,367 - 109,190,552 (+)NCBI
Rnor_6.0 Ensembl8117,268,337 - 117,280,517 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.08117,268,335 - 117,280,517 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.08116,613,044 - 116,625,220 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera8108,474,916 - 108,487,056 (+)ENTREZGENECelera
Cytogenetic Map8q32NCBI
Lamb2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555321,115,087 - 1,127,455 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555321,115,412 - 1,127,264 (-)NCBIChiLan1.0ChiLan1.0
LAMB2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2040,050,157 - 40,062,523 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12040,036,967 - 40,062,628 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Lamb2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_004936529826,178 - 841,304 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LAMB2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1331,738,284 - 31,771,220 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11331,738,282 - 31,750,623 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21334,969,986 - 34,981,114 (-)NCBISscrofa10.2Sscrofa10.2susScr3
LAMB2
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12210,523,763 - 10,535,733 (-)NCBI
ChlSab1.1 Ensembl2210,523,717 - 10,536,207 (-)Ensembl
Lamb2
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247303,145,643 - 3,158,781 (-)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000045539   ⟹   ENSPPAP00000022726
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl350,125,460 - 50,137,074 (-)Ensembl
RefSeq Acc Id: XM_034956404   ⟹   XP_034812295
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v0349,045,419 - 49,057,314 (-)NCBI
RefSeq Acc Id: XM_034956405   ⟹   XP_034812296
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v0349,045,419 - 49,057,314 (-)NCBI
RefSeq Acc Id: XM_034956406   ⟹   XP_034812297
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v0349,045,419 - 49,057,340 (-)NCBI
Protein Sequences
Protein RefSeqs XP_034812295 (Get FASTA)   NCBI Sequence Viewer  
  XP_034812296 (Get FASTA)   NCBI Sequence Viewer  
  XP_034812297 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_034812297   ⟸   XM_034956406
- Peptide Label: isoform X3
RefSeq Acc Id: XP_034812296   ⟸   XM_034956405
- Peptide Label: isoform X2
RefSeq Acc Id: XP_034812295   ⟸   XM_034956404
- Peptide Label: isoform X1
RefSeq Acc Id: ENSPPAP00000022726   ⟸   ENSPPAT00000045539

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000034500 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSPPAP00000022726 UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000045539 UniProtKB/TrEMBL
Gene3D-CATH 2.60.120.1490 UniProtKB/TrEMBL
InterPro EGF-like_dom UniProtKB/TrEMBL
  Laminin_EGF UniProtKB/TrEMBL
  Laminin_IV_B UniProtKB/TrEMBL
  Laminin_N UniProtKB/TrEMBL
  Laminin_N_sf UniProtKB/TrEMBL
NCBI Gene LAMB2 ENTREZGENE
Pfam Laminin_EGF UniProtKB/TrEMBL
  Laminin_N UniProtKB/TrEMBL
PROSITE EGF_LAM_1 UniProtKB/TrEMBL
  EGF_LAM_2 UniProtKB/TrEMBL
  LAMININ_IVB UniProtKB/TrEMBL
  LAMININ_NTER UniProtKB/TrEMBL
SMART EGF UniProtKB/TrEMBL
  EGF_Lam UniProtKB/TrEMBL
  LamNT UniProtKB/TrEMBL
UniProt A0A2R9B5U6_PANPA UniProtKB/TrEMBL