SLC16A3 (solute carrier family 16 member 3) - Rat Genome Database

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Gene: SLC16A3 (solute carrier family 16 member 3) Pan paniscus
Analyze
Symbol: SLC16A3
Name: solute carrier family 16 member 3
RGD ID: 11886166
Description: INVOLVED IN plasma membrane lactate transport (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Stomach Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); integral component of postsynaptic density membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: monocarboxylate transporter 4; solute carrier family 16, member 3 (monocarboxylic acid transporter 4)
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11782,458,711 - 82,462,221 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1782,458,737 - 82,461,721 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01776,638,030 - 76,649,159 (+)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References

Genomics

Comparative Map Data
SLC16A3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11782,458,711 - 82,462,221 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1782,458,737 - 82,461,721 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01776,638,030 - 76,649,159 (+)NCBIMhudiblu_PPA_v0panPan3
SLC16A3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1782,217,934 - 82,261,129 (+)EnsemblGRCh38hg38GRCh38
GRCh381782,217,951 - 82,240,086 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371780,186,311 - 80,197,962 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361777,779,582 - 77,790,658 (+)NCBINCBI36hg18NCBI36
Build 341777,780,235 - 77,790,640NCBI
Celera1776,780,516 - 76,791,586 (+)NCBI
Cytogenetic Map17q25.3NCBI
HuRef1775,585,945 - 75,596,959 (+)NCBIHuRef
CHM1_11780,272,024 - 80,283,105 (+)NCBICHM1_1
Slc16a3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911120,839,310 - 120,849,826 (+)NCBIGRCm39mm39
GRCm39 Ensembl11120,839,306 - 120,851,694 (+)Ensembl
GRCm3811120,948,484 - 120,959,000 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11120,948,480 - 120,960,868 (+)EnsemblGRCm38mm10GRCm38
MGSCv3711120,809,798 - 120,820,314 (+)NCBIGRCm37mm9NCBIm37
MGSCv3611120,764,574 - 120,775,090 (+)NCBImm8
Celera11132,685,655 - 132,696,171 (+)NCBICelera
Cytogenetic Map11E2NCBI
Slc16a3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.210106,212,679 - 106,222,564 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl10106,212,778 - 106,222,562 (+)Ensembl
Rnor_6.010110,138,519 - 110,148,360 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl10110,138,586 - 110,148,358 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.010109,726,073 - 109,735,892 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.410110,159,679 - 110,163,182 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.110110,174,182 - 110,177,686 (+)NCBI
Celera10104,753,007 - 104,761,582 (+)NCBICelera
Cytogenetic Map10q32.3NCBI
Slc16a3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955506935,783 - 945,029 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955506935,783 - 945,014 (-)NCBIChiLan1.0ChiLan1.0
SLC16A3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.19109,557 - 119,179 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl9110,345 - 117,352 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha9712,817 - 724,127 (-)NCBI
ROS_Cfam_1.09704,211 - 715,519 (-)NCBI
UMICH_Zoey_3.19729,268 - 740,577 (-)NCBI
UNSW_CanFamBas_1.09859,232 - 870,540 (-)NCBI
UU_Cfam_GSD_1.09934,334 - 945,639 (-)NCBI
Slc16a3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602690,616 - 698,683 (-)NCBI
SpeTri2.0NW_0049365945,715,234 - 5,721,343 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC16A3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl12796,884 - 803,554 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.112796,882 - 807,480 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.212957,853 - 967,564 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SLC16A3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11674,146,799 - 74,157,626 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl1674,150,110 - 74,158,112 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607745,743,496 - 45,754,341 (+)NCBIVero_WHO_p1.0
Slc16a3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462480111,022,997 - 11,031,578 (+)NCBIHetGla_female_1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000045237   ⟹   ENSPPAP00000022427
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1782,458,737 - 82,461,721 (+)Ensembl
RefSeq Acc Id: XM_034943198   ⟹   XP_034799089
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01776,638,587 - 76,649,159 (+)NCBI
RefSeq Acc Id: XM_034943199   ⟹   XP_034799090
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01776,640,835 - 76,649,159 (+)NCBI
RefSeq Acc Id: XM_034943200   ⟹   XP_034799091
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01776,638,030 - 76,649,159 (+)NCBI
RefSeq Acc Id: XM_034943201   ⟹   XP_034799092
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01776,641,587 - 76,649,159 (+)NCBI
Protein Sequences
Protein RefSeqs XP_034799089 (Get FASTA)   NCBI Sequence Viewer  
  XP_034799090 (Get FASTA)   NCBI Sequence Viewer  
  XP_034799091 (Get FASTA)   NCBI Sequence Viewer  
  XP_034799092 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_034799091   ⟸   XM_034943200
RefSeq Acc Id: XP_034799089   ⟸   XM_034943198
RefSeq Acc Id: XP_034799090   ⟸   XM_034943199
RefSeq Acc Id: XP_034799092   ⟸   XM_034943201
RefSeq Acc Id: ENSPPAP00000022427   ⟸   ENSPPAT00000045237


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000034399 Ensembl, ENTREZGENE
NCBI Gene SLC16A3 ENTREZGENE