CNOT10 (CCR4-NOT transcription complex subunit 10)

Gene: CNOT10 (CCR4-NOT transcription complex subunit 10) Pan paniscus

Analyze

Symbol:

CNOT10

Name:

CCR4-NOT transcription complex subunit 10

RGD ID:

11884650

Description:

INVOLVED IN mRNA catabolic process (inferred); negative regulation of translation (inferred); regulation of translation (inferred); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH genetic disease (ortholog); FOUND IN CCR4-NOT complex (inferred); cytoplasm (inferred); nucleus (inferred)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	32,665,872 - 32,754,800 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	32,670,649 - 32,759,566 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	32,613,213 - 32,702,062 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	32,920,235 - 33,008,961 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	32,920,235 - 33,008,961 (+)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

mRNA catabolic process (IEA)

negative regulation of translation (IEA)

regulation of translation (IEA)

regulatory ncRNA-mediated gene silencing (IEA)

Cellular Component

CCR4-NOT complex (IEA)

cytoplasm (IEA)

nucleus (IEA)

Molecular Function

protein binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

microRNA pathway (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

CNOT10
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	32,665,872 - 32,754,800 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	32,670,649 - 32,759,566 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	32,613,213 - 32,702,062 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	32,920,235 - 33,008,961 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	32,920,235 - 33,008,961 (+)	Ensembl	panpan1.1		panPan2

CNOT10
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	32,685,188 - 32,773,875 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	32,685,145 - 32,773,875 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	32,726,680 - 32,815,367 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	32,701,702 - 32,790,358 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	3	32,701,701 - 32,790,358	NCBI
Celera	3	32,665,983 - 32,752,706 (+)	NCBI		Celera
Cytogenetic Map	3	p22.3	NCBI
HuRef	3	32,664,190 - 32,751,210 (+)	NCBI		HuRef
CHM1_1	3	32,676,649 - 32,765,344 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	3	32,684,705 - 32,772,074 (+)	NCBI		T2T-CHM13v2.0

Cnot10
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	114,414,942 - 114,469,289 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	114,414,946 - 114,469,252 (-)	Ensembl		GRCm39 Ensembl
GRCm38	9	114,585,874 - 114,640,220 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	114,585,878 - 114,640,184 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	114,494,996 - 114,549,192 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	114,434,576 - 114,488,772 (-)	NCBI		MGSCv36	mm8
Celera	9	115,059,918 - 115,114,610 (-)	NCBI		Celera
Cytogenetic Map	9	F3	NCBI
cM Map	9	64.72	NCBI

Cnot10
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	123,158,675 - 123,208,389 (-)	NCBI		GRCr8
mRatBN7.2	8	114,280,486 - 114,330,110 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	114,280,490 - 114,330,107 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	8	119,897,595 - 119,947,105 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	118,096,843 - 118,146,352 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	115,939,676 - 115,989,176 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	122,634,681 - 122,696,466 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	122,634,685 - 122,679,720 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	121,945,846 - 122,008,281 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	119,007,192 - 119,057,079 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	8	119,026,930 - 119,076,816 (-)	NCBI
Celera	8	113,527,188 - 113,576,800 (-)	NCBI		Celera
Cytogenetic Map	8	q32	NCBI

Cnot10
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955421	2,499 - 73,676 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955421	2,807 - 69,254 (+)	NCBI	ChiLan1.0	ChiLan1.0

CNOT10
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	23	3,984,505 - 4,058,649 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	23	3,984,505 - 4,058,384 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	23	4,027,897 - 4,102,491 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	23	4,245,548 - 4,320,695 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	23	4,245,548 - 4,320,662 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	23	4,079,756 - 4,153,988 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	23	4,210,638 - 4,285,515 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	23	4,180,196 - 4,254,825 (-)	NCBI		UU_Cfam_GSD_1.0

Cnot10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	189,982,502 - 190,054,221 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936473	23,121,019 - 23,193,871 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936473	23,121,036 - 23,192,794 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CNOT10
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	18,649,746 - 18,736,068 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	18,649,725 - 18,736,075 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

CNOT10
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	77,186,062 - 77,279,011 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	15	77,186,013 - 77,286,079 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	50,555,268 - 50,650,708 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cnot10
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624788	10,758,887 - 10,835,280 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624788	10,758,676 - 10,835,156 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003826131	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_003826132	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034956026	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034956027	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034956028	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055109597	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055109598	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055109599	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055109600	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055109601	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055109602	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055109603	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055109604	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063602233	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSPPAT00000030483 ⟹ ENSPPAP00000007867

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	3	32,920,235 - 33,008,961 (+)	Ensembl

RefSeq Acc Id:

ENSPPAT00000030484 ⟹ ENSPPAP00000007868

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	3	32,920,235 - 33,008,961 (+)	Ensembl

RefSeq Acc Id:

ENSPPAT00000030485 ⟹ ENSPPAP00000007869

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	3	32,930,447 - 33,008,961 (+)	Ensembl

RefSeq Acc Id:

ENSPPAT00000030491 ⟹ ENSPPAP00000007874

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	3	32,936,425 - 33,008,697 (+)	Ensembl

RefSeq Acc Id:

ENSPPAT00000030493 ⟹ ENSPPAP00000007876

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	3	32,936,425 - 33,000,473 (+)	Ensembl

RefSeq Acc Id:

XM_003826131 ⟹ XP_003826179

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	2	32,665,872 - 32,754,800 (+)	NCBI
NHGRI_mPanPan1	3	32,670,649 - 32,759,566 (+)	NCBI
Mhudiblu_PPA_v0	3	32,613,217 - 32,702,062 (+)	NCBI
PanPan1.1	3	32,920,235 - 33,008,961 (+)	NCBI

Sequence:

show sequence

AGTTCCCACGCCGGCGCTCCAGGCGCGGCAGGCTGCCGCCCCCGGAAGTAGTGGGTACCGGGAC
GCCGTGAGGCGGAAGCTGTGTATGGCGGGAGGCTGTGGCGGTCCCTTGGTGGGGAAGCTGTTGC
TGTTGCTAGACGACGGGAACTAGCTCTCGTCACTTCCTCAGCCCGCCGTCTGCCCACTCCTCTA
GCCGGAACCTGGGGGCCCGGAGCCGGGGTAGGCACAGAGTTGTCCTCGGAGGTCCAGGACAGCG
GCCAGCCCGGCGGCGGGAGTCAGGGCCACGCCACCTGCAGGGAAGAACCCGAGTCGAAGCGGGA
AGATGGCTGCAGACAAGCCTGCAGATCAGGGAGCAGAGAAACATGAAGGCACAGGTCAGTCCTC
TGGGATCACTGATCAAGAGAAGGAGTTATCCACCAATGCTTTCCAAGCTTTCACATCTGGAAAT
TATGATGCCTGTCTACAACACCTTGCCTGTCTACAAGATATAAACAAAGATGATTATAAAATAA
TTTTGAATACAGCAGTAGCTGAGTTTTTTAAAAGTAACCAAACAACAACAGATAATTTGAGACA
AACACTTAACCAGCTGAAGAATCAGGTCCACGCAGCTGTTGAAGAAATGGATGGATTAGATGAT
GTTGAAAACAGCATGTTGTACTATAATCAAGCAGTCATTCTTTATCATCTGCGGCAGTATACAG
AAGCCATATCAGTTGGTGAAAAACTTTATCAGTTCATAGAGCCTTTTGAAGAAAAATTTGCCCA
AGCAGTGTGTTTTTTGCTTGTAGACCTGTATATATTAACCTACCAAGCTGAGAAAGCTTTGCAT
CTTCTTGCTGTCCTAGAAAAAATGATTTCACAGGGTAACAATAACAAAAATGGAAAGAATGAGA
CTGGTAATAACAACAACAAAGATGGATCTAATCATAAAGCTGAAAGTGGAGCTCTAATAGAAGC
TGCAAAATCAAAGATACATCAGTACAAAGTACGAGCTTATATCCAAATGAAGTCTCTGAAAGCA
TGTAAAAGGGAAATCAAGTCAGTCATGAATACAGCTGGAAATTCCGCACCCTCTCTCTTTCTTA
AAAGCAATTTTGAGTACTTAAGAGGTAATTATCGAAAAGCCGTGAAGCTATTAAATAGTTCAAA
CATTGCTGAGCATCCAGGATTCATGAAAACAGGTGAATGCTTGAGATGCATGTTCTGGAATAAC
CTTGGTTGCATCCATTTTGCCATGAGCAAGCACAATTTGGGAATATTCTACTTTAAAAAGGCTC
TGCAAGAGAATGACAATGTCTGTGCACAGCTCAGTGCAGGTAGCACTGATCCAGGTAAAAAATT
TTCAGGAAGACCCATGTGTACGTTACTAACCAATAAGAGATACGAGTTGCTGTATAACTGTGGA
ATTCAGCTTCTTCACATTGGAAGGCCTCTTGCTGCCTTCGAATGTCTGATTGAAGCTGTTCAGG
TTTATCATGCAAATCCTCGCCTCTGGCTACGGCTGGCTGAATGCTGCATTGCTGCCAATAAGGG
GACTTCTGAACAAGAAACTAAAGGCCTTCCCAGCAAAAAAGGAATTGTACAGTCTATTGTTGGT
CAAGGCTATCATCGTAAAATAGTTTTGGCATCACAGTCTATACAGAATACTGTTTATAATGATG
GGCAGTCTTCGGCCATTCCTGTAGCCAGTATGGAGTTTGCAGCCATATGTCTCAGAAATGCCTT
GTTGCTGCTACCTGAAGAACAGCAAGATCCAAAGCAGGAAAATGGGGCTAAAAATAGTAATCAA
TTAGGTGGGAACACAGAGAGCAGCGAAAGCAGTGAAACTTGCAGCAGTAAAAGCCATGATGGAG
ATAAATTCATTCCAGCTCCACCTTCTTCTCCATTGAGAAAACAGGAATTAGAAAACTTAAAGTG
CTCCATACTTGCTTGCAGTGCCTACGTGGCTCTGGCTTTGGGTGATAACCTCATGGCTTTGAAT
CATGCAGATAAACTTCTTCAGCAGCCCAAGCTGTCAGGATCTCTTAAGTTTTTGGGACATTTAT
ATGCTGCAGAAGCCCTCATCTCTCTCGACAGAATATCTGATGCCATTACTCACTTGAACCCGGA
GAATGTCACTGATGTCTCCTTAGGGATCTCTTCAAATGAGCAGGACCAAGGATCAGACAAAGGT
GAAAATGAAGCAATGGAATCCTCTGGTAAGCGGGCCCCTCAGTGCTACCCCAGTTCCGTCAACT
CTGCTAGGACTGTGATGCTGTTCAACCTTGGCAGCGCTTACTGCCTGAGGAGCGAATATGACAA
AGCCCGAAAGTGTCTCCACCAGGCGGCTTCAATGATCCATCCTAAAGAGGTGCCCCCTGAGGCC
ATCTTGCTGGCAGTCTACCTTGAACTGCAGAATGGTAATACTCAGCTGGCCTTACAGATCATCA
AAAGGAATCAGCTGCTCCCTGCAGTGAAAACACACTCTGAAGTGAGAAAGAAGCCAGTGTTTCA
GCCTGTCCACCCGATCCAGCCCATCCAAATGCCGGCTTTCACCACTGTGCAGAGAAAGTGATAC
TTCACTTTTGGAAAACTGTTACCTGAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATC
ACAGCAGAATGAATAAAAGATGGTGAAGGCTGTTAATTTTGAGACAATTCTACCCCTGACTTTT
GGCCAAAAGCTTACTTAAAATTAAGGATTTACTAAGTCATCATCAGCTGTTTTTCTTAATTTCA
GCCAGACTATTAATTTTGAGCCATTATGTAATATATGCCATAGGCAATTAAAACATAATTTTAT
CAGAA

hide sequence

RefSeq Acc Id:

XM_003826132 ⟹ XP_003826180

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	2	32,665,898 - 32,754,800 (+)	NCBI
NHGRI_mPanPan1	3	32,670,664 - 32,759,566 (+)	NCBI
Mhudiblu_PPA_v0	3	32,613,216 - 32,702,062 (+)	NCBI
PanPan1.1	3	32,920,235 - 33,008,961 (+)	NCBI

Sequence:

show sequence

AGTTCCCACGCCGGCGCTCCAGGCGCGGCAGGCTGCCGCCCCCGGAAGTAGTGGGTACCGGGAC
GCCGTGAGGCGGAAGCTGTGTATGGCGGGAGGCTGTGGCGGTCCCTTGGTGGGGAAGCTGTTGC
TGTTGCTAGACGACGGGAACTAGCTCTCGTCACTTCCTCAGCCCGCCGTCTGCCCACTCCTCTA
GCCGGAACCTGGGGGCCCGGAGCCGGGGTAGGCACAGAGTTGTCCTCGGAGGTCCAGGACAGCG
GCCAGCCCGGCGGCGGGAGTCAGGGCCACGCCACCTGCAGGGAAGAACCCGAGTCGAAGCGGGA
AGATGGCTGCAGACAAGCCTGCAGATCAGGGAGCAGAGAAACATGAAGGCACAGGTCAGTCCTC
TGGGATCACTGATCAAGAGAAGGAGTTATCCACCAATGCTTTCCAAGCTTTCACATCTGGAAAT
TATGATGCCTGTCTACAACACCTTGCCTGTCTACAAGATATAAACAAAGATGATTATAAAATAA
TTTTGAATACAGCAGTAGCTGAGTTTTTTAAAAGTAACCAAACAACAACAGATAATTTGAGACA
AACACTTAACCAGCTGAAGAATCAGGTCCACGCAGCTGTTGAAGAAATGGATGGATTAGATGAT
GTTGAAAACAGCATGTTGTACTATAATCAAGCAGTCATTCTTTATCATCTGCGGCAGTATACAG
AAGCCATATCAGTTGGTGAAAAACTTTATCAGTTCATAGAGCCTTTTGAAGAAAAATTTGCCCA
AGCAGTGTGTTTTTTGCTTGTAGACCTGTATATATTAACCTACCAAGCTGAGAAAGCTTTGCAT
CTTCTTGCTGTCCTAGAAAAAATGATTTCACAGGGTAACAATAACAAAAATGGAAAGAATGAGA
CTGGTAATAACAACAACAAAGATGGATCTAATCATAAAGCTGAAAGTGGAGCTCTAATAGAAGC
TGCAAAATCAAAGATACATCAGTACAAAGTACGAGCTTATATCCAAATGAAGTCTCTGAAAGCA
TGTAAAAGGGAAATCAAGTCAGTCATGAATACAGCTGGAAATTCCGCACCCTCTCTCTTTCTTA
AAAGCAATTTTGAGTACTTAAGAGGTAATTATCGAAAAGCCGTGAAGCTATTAAATAGTTCAAA
CATTGCTGAGCATCCAGGATTCATGAAAACAGGTGAATGCTTGAGATGCATGTTCTGGAATAAC
CTTGGTTGCATCCATTTTGCCATGAGCAAGCACAATTTGGGAATATTCTACTTTAAAAAGGCTC
TGCAAGAGAATGACAATGTCTGTGCACAGCTCAGTGCAGGTAGCACTGATCCAGGTAAAAAATT
TTCAGGAAGACCCATGTGTACGTTACTAACCAATAAGAGATACGAGTTGCTGTATAACTGTGGA
ATTCAGCTTCTTCACATTGGAAGGCCTCTTGCTGCCTTCGAATGTCTGATTGAAGCTGTTCAGG
TTTATCATGCAAATCCTCGCCTCTGGCTACGGCTGGCTGAATGCTGCATTGCTGCCAATAAGGG
GACTTCTGAACAAGAAACTAAAGGCCTTCCCAGCAAAAAAGGAATTGTACAGTCTATTGTTGGT
CAAGGCTATCATCGTAAAATAGTTTTGGCATCACAGTCTATACAGAATACTGTTTATAATGATG
GGCAGTCTTCGGCCATTCCTGTAGCCAGTATGGAGTTTGCAGCCATATGTCTCAGAAATGCCTT
GTTGCTGCTACCTGAAGAACAGCAAGATCCAAAGCAGGAAAATGGGGCTAAAAATAGTAATCAA
TTAGGTGGGAACACAGAGAGCAGCGAAAGCAGTGAAACTTGCAGGTGCTCCATACTTGCTTGCA
GTGCCTACGTGGCTCTGGCTTTGGGTGATAACCTCATGGCTTTGAATCATGCAGATAAACTTCT
TCAGCAGCCCAAGCTGTCAGGATCTCTTAAGTTTTTGGGACATTTATATGCTGCAGAAGCCCTC
ATCTCTCTCGACAGAATATCTGATGCCATTACTCACTTGAACCCGGAGAATGTCACTGATGTCT
CCTTAGGGATCTCTTCAAATGAGCAGGACCAAGGATCAGACAAAGGTGAAAATGAAGCAATGGA
ATCCTCTGGTAAGCGGGCCCCTCAGTGCTACCCCAGTTCCGTCAACTCTGCTAGGACTGTGATG
CTGTTCAACCTTGGCAGCGCTTACTGCCTGAGGAGCGAATATGACAAAGCCCGAAAGTGTCTCC
ACCAGGCGGCTTCAATGATCCATCCTAAAGAGGTGCCCCCTGAGGCCATCTTGCTGGCAGTCTA
CCTTGAACTGCAGAATGGTAATACTCAGCTGGCCTTACAGATCATCAAAAGGAATCAGCTGCTC
CCTGCAGTGAAAACACACTCTGAAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCC
AGCCCATCCAAATGCCGGCTTTCACCACTGTGCAGAGAAAGTGATACTTCACTTTTGGAAAACT
GTTACCTGAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAA
AGATGGTGAAGGCTGTTAATTTTGAGACAATTCTACCCCTGACTTTTGGCCAAAAGCTTACTTA
AAATTAAGGATTTACTAAGTCATCATCAGCTGTTTTTCTTAATTTCAGCCAGACTATTAATTTT
GAGCCATTATGTAATATATGCCATAGGCAATTAAAACATAATTTTATCAGAA

hide sequence

RefSeq Acc Id:

XM_034956026 ⟹ XP_034811917

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	2	32,665,898 - 32,754,800 (+)	NCBI
NHGRI_mPanPan1	3	32,670,664 - 32,759,566 (+)	NCBI
Mhudiblu_PPA_v0	3	32,613,216 - 32,702,062 (+)	NCBI

RefSeq Acc Id:

XM_034956027 ⟹ XP_034811918

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	2	32,665,893 - 32,754,800 (+)	NCBI
NHGRI_mPanPan1	3	32,670,664 - 32,759,566 (+)	NCBI
Mhudiblu_PPA_v0	3	32,613,216 - 32,702,062 (+)	NCBI

RefSeq Acc Id:

XM_034956028 ⟹ XP_034811919

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	2	32,665,898 - 32,754,800 (+)	NCBI
NHGRI_mPanPan1	3	32,670,664 - 32,759,566 (+)	NCBI
Mhudiblu_PPA_v0	3	32,613,217 - 32,702,062 (+)	NCBI

RefSeq Acc Id:

XM_055109597 ⟹ XP_054965572

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	2	32,676,301 - 32,754,800 (+)	NCBI
NHGRI_mPanPan1	3	32,681,067 - 32,759,566 (+)	NCBI

RefSeq Acc Id:

XM_055109598 ⟹ XP_054965573

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	2	32,676,309 - 32,754,800 (+)	NCBI
NHGRI_mPanPan1	3	32,681,075 - 32,759,566 (+)	NCBI

RefSeq Acc Id:

XM_055109599 ⟹ XP_054965574

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	2	32,676,314 - 32,754,800 (+)	NCBI
NHGRI_mPanPan1	3	32,681,080 - 32,759,566 (+)	NCBI

RefSeq Acc Id:

XM_055109600 ⟹ XP_054965575

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	2	32,676,314 - 32,754,800 (+)	NCBI
NHGRI_mPanPan1	3	32,681,080 - 32,759,566 (+)	NCBI

RefSeq Acc Id:

XM_055109601 ⟹ XP_054965576

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	2	32,665,923 - 32,754,800 (+)	NCBI
NHGRI_mPanPan1	3	32,670,694 - 32,759,566 (+)	NCBI

RefSeq Acc Id:

XM_055109602 ⟹ XP_054965577

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	2	32,676,314 - 32,754,800 (+)	NCBI
NHGRI_mPanPan1	3	32,681,080 - 32,759,566 (+)	NCBI

RefSeq Acc Id:

XM_055109603 ⟹ XP_054965578

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	2	32,665,898 - 32,754,800 (+)	NCBI
NHGRI_mPanPan1	3	32,670,664 - 32,759,566 (+)	NCBI

RefSeq Acc Id:

XM_055109604 ⟹ XP_054965579

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	2	32,665,898 - 32,754,800 (+)	NCBI
NHGRI_mPanPan1	3	32,670,664 - 32,759,566 (+)	NCBI

RefSeq Acc Id:

XM_063602233 ⟹ XP_063458303

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	2	32,665,898 - 32,754,800 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_003826179	(Get FASTA)	NCBI Sequence Viewer
	XP_003826180	(Get FASTA)	NCBI Sequence Viewer
	XP_034811917	(Get FASTA)	NCBI Sequence Viewer
	XP_034811918	(Get FASTA)	NCBI Sequence Viewer
	XP_034811919	(Get FASTA)	NCBI Sequence Viewer
	XP_054965572	(Get FASTA)	NCBI Sequence Viewer
	XP_054965573	(Get FASTA)	NCBI Sequence Viewer
	XP_054965574	(Get FASTA)	NCBI Sequence Viewer
	XP_054965575	(Get FASTA)	NCBI Sequence Viewer
	XP_054965576	(Get FASTA)	NCBI Sequence Viewer
	XP_054965577	(Get FASTA)	NCBI Sequence Viewer
	XP_054965578	(Get FASTA)	NCBI Sequence Viewer
	XP_054965579	(Get FASTA)	NCBI Sequence Viewer
	XP_063458303	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000007867.1
	ENSPPAP00000007868.1
	ENSPPAP00000007869.1
	ENSPPAP00000007874.1
	ENSPPAP00000007876.1

RefSeq Acc Id:	XP_003826179 ⟸ XM_003826131
- Peptide Label:	isoform X7
- UniProtKB:	A0A2R8ZY54 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAADKPADQGAEKHEGTGQSSGITDQEKELSTNAFQAFTSGNYDACLQHLACLQDINKDDYKII LNTAVAEFFKSNQTTTDNLRQTLNQLKNQVHAAVEEMDGLDDVENSMLYYNQAVILYHLRQYTE AISVGEKLYQFIEPFEEKFAQAVCFLLVDLYILTYQAEKALHLLAVLEKMISQGNNNKNGKNET GNNNNKDGSNHKAESGALIEAAKSKIHQYKVRAYIQMKSLKACKREIKSVMNTAGNSAPSLFLK SNFEYLRGNYRKAVKLLNSSNIAEHPGFMKTGECLRCMFWNNLGCIHFAMSKHNLGIFYFKKAL QENDNVCAQLSAGSTDPGKKFSGRPMCTLLTNKRYELLYNCGIQLLHIGRPLAAFECLIEAVQV YHANPRLWLRLAECCIAANKGTSEQETKGLPSKKGIVQSIVGQGYHRKIVLASQSIQNTVYNDG QSSAIPVASMEFAAICLRNALLLLPEEQQDPKQENGAKNSNQLGGNTESSESSETCSSKSHDGD KFIPAPPSSPLRKQELENLKCSILACSAYVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLY AAEALISLDRISDAITHLNPENVTDVSLGISSNEQDQGSDKGENEAMESSGKRAPQCYPSSVNS ARTVMLFNLGSAYCLRSEYDKARKCLHQAASMIHPKEVPPEAILLAVYLELQNGNTQLALQIIK RNQLLPAVKTHSEVRKKPVFQPVHPIQPIQMPAFTTVQRK hide sequence

RefSeq Acc Id:	XP_003826180 ⟸ XM_003826132
- Peptide Label:	isoform X11
- UniProtKB:	A0A2R8ZSB8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAADKPADQGAEKHEGTGQSSGITDQEKELSTNAFQAFTSGNYDACLQHLACLQDINKDDYKII LNTAVAEFFKSNQTTTDNLRQTLNQLKNQVHAAVEEMDGLDDVENSMLYYNQAVILYHLRQYTE AISVGEKLYQFIEPFEEKFAQAVCFLLVDLYILTYQAEKALHLLAVLEKMISQGNNNKNGKNET GNNNNKDGSNHKAESGALIEAAKSKIHQYKVRAYIQMKSLKACKREIKSVMNTAGNSAPSLFLK SNFEYLRGNYRKAVKLLNSSNIAEHPGFMKTGECLRCMFWNNLGCIHFAMSKHNLGIFYFKKAL QENDNVCAQLSAGSTDPGKKFSGRPMCTLLTNKRYELLYNCGIQLLHIGRPLAAFECLIEAVQV YHANPRLWLRLAECCIAANKGTSEQETKGLPSKKGIVQSIVGQGYHRKIVLASQSIQNTVYNDG QSSAIPVASMEFAAICLRNALLLLPEEQQDPKQENGAKNSNQLGGNTESSESSETCRCSILACS AYVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVTDVS LGISSNEQDQGSDKGENEAMESSGKRAPQCYPSSVNSARTVMLFNLGSAYCLRSEYDKARKCLH QAASMIHPKEVPPEAILLAVYLELQNGNTQLALQIIKRNQLLPAVKTHSEVRKKPVFQPVHPIQ PIQMPAFTTVQRK hide sequence

RefSeq Acc Id:	XP_034811918 ⟸ XM_034956027
- Peptide Label:	isoform X9
- UniProtKB:	A0A2R8ZY54 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_034811917 ⟸ XM_034956026
- Peptide Label:	isoform X8
- UniProtKB:	A0A2R8ZY54 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_034811919 ⟸ XM_034956028
- Peptide Label:	isoform X13
- UniProtKB:	A0A2R8ZSB8 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSPPAP00000007874 ⟸ ENSPPAT00000030491

RefSeq Acc Id:

ENSPPAP00000007876 ⟸ ENSPPAT00000030493

RefSeq Acc Id:

ENSPPAP00000007868 ⟸ ENSPPAT00000030484

RefSeq Acc Id:

ENSPPAP00000007869 ⟸ ENSPPAT00000030485

RefSeq Acc Id:

ENSPPAP00000007867 ⟸ ENSPPAT00000030483

RefSeq Acc Id:	XP_054965578 ⟸ XM_055109603
- Peptide Label:	isoform X10
- UniProtKB:	A0A2R8ZY54 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_054965579 ⟸ XM_055109604
- Peptide Label:	isoform X12
- UniProtKB:	A0A2R8ZSB8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_054965576 ⟸ XM_055109601
- Peptide Label:	isoform X5
- UniProtKB:	A0A2R8ZY54 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_054965572 ⟸ XM_055109597
- Peptide Label:	isoform X1
- UniProtKB:	A0A2R8ZSB5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_054965573 ⟸ XM_055109598
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R8ZSB5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_054965574 ⟸ XM_055109599
- Peptide Label:	isoform X3
- UniProtKB:	A0A2R8ZSB5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_054965575 ⟸ XM_055109600
- Peptide Label:	isoform X4
- UniProtKB:	A0A2R8ZSB5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_054965577 ⟸ XM_055109602
- Peptide Label:	isoform X6
- UniProtKB:	A0A2R8ZSB5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063458303 ⟸ XM_063602233
- Peptide Label:	isoform X14

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000027061	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000030483.1	UniProtKB/TrEMBL
	ENSPPAT00000030484.1	UniProtKB/TrEMBL
	ENSPPAT00000030485.1	UniProtKB/TrEMBL
	ENSPPAT00000030491.1	UniProtKB/TrEMBL
	ENSPPAT00000030493.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.40.10	UniProtKB/TrEMBL
InterPro	CNOT10	UniProtKB/TrEMBL
	TPR-like_helical_dom_sf	UniProtKB/TrEMBL
	TPR_repeat	UniProtKB/TrEMBL
KEGG Report	pps:100980356	UniProtKB/TrEMBL
NCBI Gene	CNOT10	ENTREZGENE
PANTHER	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 10	UniProtKB/TrEMBL
	PTHR12979	UniProtKB/TrEMBL
PROSITE	TPR	UniProtKB/TrEMBL
SMART	TPR	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48452	UniProtKB/TrEMBL
UniProt	A0A2R8ZSB5	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R8ZSB8	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R8ZSC2_PANPA	UniProtKB/TrEMBL
	A0A2R8ZVI3_PANPA	UniProtKB/TrEMBL
	A0A2R8ZY54	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

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