SLC17A9 (solute carrier family 17 member 9) - Rat Genome Database

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Gene: SLC17A9 (solute carrier family 17 member 9) Pan paniscus
Analyze
Symbol: SLC17A9
Name: solute carrier family 17 member 9
RGD ID: 11882462
Description: ENCODES a protein that exhibits ADP transmembrane transporter activity (inferred); ATP transmembrane transporter activity (inferred); guanine nucleotide transmembrane transporter activity (inferred); INVOLVED IN ADP transport (ortholog); ATP export (ortholog); ATP transport (ortholog); ASSOCIATED WITH autosomal dominant nocturnal frontal lobe epilepsy (ortholog); benign familial infantile seizures 6 (ortholog); developmental and epileptic encephalopathy (ortholog); FOUND IN lysosomal membrane (ortholog); mucin granule (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: voltage-gated purine nucleotide uniporter SLC17A9
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22168,739,785 - 68,755,453 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12068,733,119 - 68,748,587 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02059,339,779 - 59,356,396 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12060,631,969 - 60,647,286 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2060,631,969 - 60,647,278 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
SLC17A9
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22168,739,785 - 68,755,453 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12068,733,119 - 68,748,587 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02059,339,779 - 59,356,396 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12060,631,969 - 60,647,286 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2060,631,969 - 60,647,278 (+)Ensemblpanpan1.1panPan2
SLC17A9
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382062,952,709 - 62,969,585 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2062,952,707 - 62,969,585 (+)EnsemblGRCh38hg38GRCh38
GRCh372061,584,061 - 61,600,937 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362061,054,444 - 61,070,394 (+)NCBINCBI36Build 36hg18NCBI36
Build 342061,054,503 - 61,070,392NCBI
Celera2058,260,628 - 58,276,497 (+)NCBICelera
Cytogenetic Map20q13.33NCBI
HuRef2058,301,019 - 58,316,723 (+)NCBIHuRef
CHM1_12061,485,010 - 61,500,690 (+)NCBICHM1_1
T2T-CHM13v2.02064,752,832 - 64,769,656 (+)NCBIT2T-CHM13v2.0
Slc17a9
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392180,363,989 - 180,384,073 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2180,367,056 - 180,384,073 (+)EnsemblGRCm39 Ensembl
GRCm382180,724,576 - 180,742,280 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2180,725,263 - 180,742,280 (+)EnsemblGRCm38mm10GRCm38
MGSCv372180,460,044 - 180,476,983 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362180,654,787 - 180,663,584 (+)NCBIMGSCv36mm8
Celera2184,810,869 - 184,828,004 (+)NCBICelera
Cytogenetic Map2H4NCBI
cM Map2103.28NCBI
Slc17a9
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83188,211,106 - 188,233,553 (+)NCBIGRCr8
mRatBN7.23167,839,246 - 167,857,462 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3167,839,385 - 167,855,985 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3172,219,516 - 172,236,118 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03181,178,612 - 181,195,214 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03177,840,313 - 177,856,915 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03176,228,433 - 176,246,971 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3176,230,378 - 176,246,953 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03179,929,180 - 179,946,174 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43169,820,567 - 169,837,283 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13169,726,638 - 169,742,785 (+)NCBI
Celera3164,726,946 - 164,743,476 (-)NCBICelera
Cytogenetic Map3q43NCBI
Slc17a9
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555281,124,437 - 1,139,476 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555281,124,430 - 1,139,476 (-)NCBIChiLan1.0ChiLan1.0
SLC17A9
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12446,752,464 - 46,765,915 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2446,752,107 - 46,766,375 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2445,936,526 - 45,949,977 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02447,624,805 - 47,638,260 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2447,624,794 - 47,638,258 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12446,722,604 - 46,736,030 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02446,845,708 - 46,859,155 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02447,601,923 - 47,615,385 (+)NCBIUU_Cfam_GSD_1.0
Slc17a9
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640194,981,669 - 194,997,290 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493651410,435,275 - 10,450,960 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493651410,435,261 - 10,450,976 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC17A9
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1762,186,112 - 62,200,084 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11762,186,114 - 62,200,091 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
SLC17A9
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.121,254,573 - 1,270,730 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl21,255,203 - 1,270,614 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605049,083,240 - 49,100,007 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc17a9
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474128,707,739 - 28,730,695 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSPPAT00000017348   ⟹   ENSPPAP00000003767
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2060,631,969 - 60,647,278 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000017355   ⟹   ENSPPAP00000003769
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2060,632,352 - 60,647,278 (+)Ensembl
RefSeq Acc Id: XM_003810835   ⟹   XP_003810883
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22168,739,787 - 68,755,453 (+)NCBI
NHGRI_mPanPan12068,733,119 - 68,748,582 (+)NCBI
Mhudiblu_PPA_v02059,339,779 - 59,356,396 (+)NCBI
PanPan1.12060,631,969 - 60,647,286 (+)NCBI
Sequence:
RefSeq Acc Id: XM_003810836   ⟹   XP_003810884
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22168,740,284 - 68,755,453 (+)NCBI
NHGRI_mPanPan12068,733,413 - 68,748,587 (+)NCBI
Mhudiblu_PPA_v02059,340,086 - 59,356,396 (+)NCBI
PanPan1.12060,632,353 - 60,647,286 (+)NCBI
Sequence:
RefSeq Acc Id: XM_063601141   ⟹   XP_063457211
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22168,739,785 - 68,755,453 (+)NCBI
Protein Sequences
Protein RefSeqs XP_003810883 (Get FASTA)   NCBI Sequence Viewer  
  XP_003810884 (Get FASTA)   NCBI Sequence Viewer  
  XP_063457211 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000003767
  ENSPPAP00000003767.1
  ENSPPAP00000003769
  ENSPPAP00000003769.1
RefSeq Acc Id: XP_003810883   ⟸   XM_003810835
- Peptide Label: isoform X2
- UniProtKB: A0A2R8ZFI7 (UniProtKB/TrEMBL),   A0A2R8ZFZ3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_003810884   ⟸   XM_003810836
- Peptide Label: isoform X3
- UniProtKB: A0A2R8ZFZ3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSPPAP00000003767   ⟸   ENSPPAT00000017348
RefSeq Acc Id: ENSPPAP00000003769   ⟸   ENSPPAT00000017355
RefSeq Acc Id: XP_063457211   ⟸   XM_063601141
- Peptide Label: isoform X1

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000015837 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000017348.1 UniProtKB/TrEMBL
  ENSPPAT00000017355.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.1250.20 UniProtKB/TrEMBL
InterPro MFS UniProtKB/TrEMBL
  MFS_dom UniProtKB/TrEMBL
  MFS_trans_sf UniProtKB/TrEMBL
  SLC17A9-like UniProtKB/TrEMBL
  Sugar_transporter_CS UniProtKB/TrEMBL
KEGG Report pps:100994338 UniProtKB/TrEMBL
NCBI Gene SLC17A9 ENTREZGENE
PANTHER SOLUTE CARRIER FAMILY 17 UniProtKB/TrEMBL
  SOLUTE CARRIER FAMILY 17 MEMBER 9 UniProtKB/TrEMBL
Pfam MFS_1 UniProtKB/TrEMBL
PROSITE MFS UniProtKB/TrEMBL
  SUGAR_TRANSPORT_2 UniProtKB/TrEMBL
Superfamily-SCOP SSF103473 UniProtKB/TrEMBL
UniProt A0A2R8ZFI7 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R8ZFZ3 ENTREZGENE, UniProtKB/TrEMBL