HERPUD1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 18 | 66,403,188 - 66,416,171 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 16 | 72,323,881 - 72,336,865 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 16 | 37,210,170 - 37,221,961 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 16 | 56,343,025 - 56,355,164 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 16 | 56,343,025 - 56,355,164 (+) | Ensembl | panpan1.1 | | panPan2 | |
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HERPUD1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 16 | 56,932,142 - 56,944,864 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 16 | 56,932,142 - 56,944,864 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 16 | 56,966,054 - 56,978,776 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 16 | 55,523,249 - 55,535,294 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 16 | 55,523,248 - 55,535,294 | NCBI | | | | | Celera | 16 | 41,466,026 - 41,478,076 (+) | NCBI | | Celera | | | Cytogenetic Map | 16 | q13 | NCBI | | | | | HuRef | 16 | 42,835,319 - 42,847,282 (+) | NCBI | | HuRef | | | CHM1_1 | 16 | 58,373,967 - 58,385,760 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 16 | 62,728,473 - 62,741,195 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Herpud1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 8 | 95,113,057 - 95,121,999 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 8 | 95,113,066 - 95,122,005 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 8 | 94,386,429 - 94,395,371 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 8 | 94,386,438 - 94,395,377 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 8 | 96,910,400 - 96,919,258 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 8 | 97,275,629 - 97,284,487 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 8 | 98,718,356 - 98,727,224 (+) | NCBI | | Celera | | | Cytogenetic Map | 8 | C5 | NCBI | | | | | cM Map | 8 | 46.46 | NCBI | | | | |
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Herpud1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 19 | 10,604,360 - 10,624,168 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 19 | 10,598,411 - 10,609,002 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 19 | 10,598,417 - 10,618,424 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 19 | 10,561,735 - 10,572,117 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 19 | 11,328,571 - 11,338,953 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 19 | 10,615,556 - 10,625,938 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 19 | 11,046,905 - 11,057,440 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 19 | 11,046,909 - 11,057,254 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 19 | 11,027,622 - 11,038,305 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 19 | 11,036,567 - 11,046,914 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 19 | 11,041,392 - 11,051,740 (-) | NCBI | | | | | Celera | 19 | 10,486,005 - 10,496,352 (-) | NCBI | | Celera | | | Cytogenetic Map | 19 | p13 | NCBI | | | | |
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Herpud1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955433 | 14,608,375 - 14,621,839 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955433 | 14,609,275 - 14,621,774 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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HERPUD1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 2 | 59,388,492 - 59,400,028 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 2 | 59,388,494 - 59,400,003 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 2 | 56,017,333 - 56,028,868 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 2 | 59,927,541 - 59,939,082 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 2 | 59,927,546 - 59,939,082 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 2 | 56,758,736 - 56,770,263 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 2 | 57,766,037 - 57,777,356 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 2 | 58,660,262 - 58,671,800 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Herpud1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024409349 | 50,486,978 - 50,497,944 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936475 | 9,091,176 - 9,102,109 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936475 | 9,091,115 - 9,102,101 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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HERPUD1 (Sus scrofa - pig) |
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HERPUD1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 5 | 42,877,812 - 42,889,576 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 5 | 42,877,781 - 42,890,298 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666047 | 33,458,778 - 33,470,865 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Herpud1 (Heterocephalus glaber - naked mole-rat) |
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