ETFBKMT (electron transfer flavoprotein subunit beta lysine methyltransferase) - Rat Genome Database

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Gene: ETFBKMT (electron transfer flavoprotein subunit beta lysine methyltransferase) Pan paniscus
Analyze
Symbol: ETFBKMT
Name: electron transfer flavoprotein subunit beta lysine methyltransferase
RGD ID: 11873628
Description: ENCODES a protein that exhibits heat shock protein binding (inferred); protein methyltransferase activity (inferred); protein-lysine N-methyltransferase activity (inferred); INVOLVED IN negative regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase (inferred); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred); mitochondrial matrix (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: electron transfer flavoprotein beta subunit lysine methyltransferase
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21065,100,292 - 65,115,983 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11265,100,037 - 65,112,401 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01254,570,372 - 54,586,751 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11257,157,771 - 57,172,960 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1257,161,781 - 57,172,705 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
ETFBKMT
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21065,100,292 - 65,115,983 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11265,100,037 - 65,112,401 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01254,570,372 - 54,586,751 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11257,157,771 - 57,172,960 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1257,161,781 - 57,172,705 (-)Ensemblpanpan1.1panPan2
ETFBKMT
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381231,647,160 - 31,673,114 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1231,647,160 - 31,673,114 (+)EnsemblGRCh38hg38GRCh38
GRCh371231,800,094 - 31,826,048 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361231,703,388 - 31,713,168 (+)NCBINCBI36Build 36hg18NCBI36
Celera1211,622,361 - 11,644,279 (+)NCBICelera
Cytogenetic Map12p11.21NCBI
HuRef1231,552,599 - 31,574,790 (+)NCBIHuRef
CHM1_11231,765,730 - 31,787,988 (+)NCBICHM1_1
T2T-CHM13v2.01231,523,671 - 31,549,944 (+)NCBIT2T-CHM13v2.0
Etfbkmt
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396149,042,980 - 149,052,669 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6149,041,347 - 149,052,669 (+)EnsemblGRCm39 Ensembl
GRCm386149,141,476 - 149,151,171 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6149,139,849 - 149,151,171 (+)EnsemblGRCm38mm10GRCm38
MGSCv376149,090,119 - 149,099,693 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366149,098,767 - 149,108,341 (+)NCBIMGSCv36mm8
Celera6152,181,698 - 152,191,250 (+)NCBICelera
Cytogenetic Map6G3NCBI
cM Map678.8NCBI
Etfbkmt
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84183,871,819 - 183,936,843 (+)NCBIGRCr8
mRatBN7.24182,140,492 - 182,204,635 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4182,140,559 - 182,150,305 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4188,421,028 - 188,430,757 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04184,205,559 - 184,215,287 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04182,826,055 - 182,835,784 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04183,655,968 - 183,665,757 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4183,656,013 - 183,665,754 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04247,781,128 - 247,860,740 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44186,570,750 - 186,580,489 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14186,815,873 - 186,825,621 (+)NCBI
Celera4170,606,515 - 170,616,245 (+)NCBICelera
Cytogenetic Map4q44NCBI
Etfbkmt
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495541135,999,583 - 36,025,805 (+)NCBIChiLan1.0ChiLan1.0
ETFBKMT
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12717,103,168 - 17,110,405 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2717,103,210 - 17,165,828 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2729,307,366 - 29,316,228 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02717,282,441 - 17,291,321 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2717,284,117 - 17,289,687 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12717,094,544 - 17,101,717 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02717,125,321 - 17,134,185 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02729,460,638 - 29,467,804 (+)NCBIUU_Cfam_GSD_1.0
Etfbkmt
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494577,700,471 - 77,707,880 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366074,532,230 - 4,541,283 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366074,533,607 - 4,541,230 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ETFBKMT
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1542,568,131 - 42,575,983 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
ETFBKMT
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11131,122,358 - 31,147,473 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1131,134,559 - 31,147,174 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660693,827,222 - 3,844,457 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Etfbkmt
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624933958,332 - 970,785 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000031994   ⟹   ENSPPAP00000009353
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1257,161,781 - 57,172,705 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000031996   ⟹   ENSPPAP00000009355
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1257,163,182 - 57,170,186 (-)Ensembl
RefSeq Acc Id: XM_003813734   ⟹   XP_003813782
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21065,100,292 - 65,115,020 (-)NCBI
NHGRI_mPanPan11265,100,037 - 65,111,347 (-)NCBI
Mhudiblu_PPA_v01254,570,372 - 54,585,699 (-)NCBI
PanPan1.11257,157,771 - 57,172,745 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008966308   ⟹   XP_008964556
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21065,100,292 - 65,115,982 (-)NCBI
NHGRI_mPanPan11265,100,037 - 65,112,401 (-)NCBI
Mhudiblu_PPA_v01254,574,387 - 54,586,751 (-)NCBI
PanPan1.11257,161,781 - 57,172,960 (-)NCBI
Sequence:
RefSeq Acc Id: XM_034936066   ⟹   XP_034791957
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21065,100,292 - 65,114,959 (-)NCBI
NHGRI_mPanPan11265,100,037 - 65,111,347 (-)NCBI
Mhudiblu_PPA_v01254,574,387 - 54,585,699 (-)NCBI
RefSeq Acc Id: XM_034936067   ⟹   XP_034791958
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21065,100,292 - 65,114,354 (-)NCBI
NHGRI_mPanPan11265,100,037 - 65,110,745 (-)NCBI
Mhudiblu_PPA_v01254,574,387 - 54,585,081 (-)NCBI
RefSeq Acc Id: XM_034936068   ⟹   XP_034791959
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21065,100,292 - 65,115,983 (-)NCBI
NHGRI_mPanPan11265,100,037 - 65,111,447 (-)NCBI
Mhudiblu_PPA_v01254,574,387 - 54,585,798 (-)NCBI
RefSeq Acc Id: XM_034936069   ⟹   XP_034791960
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21065,100,292 - 65,114,959 (-)NCBI
NHGRI_mPanPan11265,100,037 - 65,111,347 (-)NCBI
Mhudiblu_PPA_v01254,574,387 - 54,585,161 (-)NCBI
RefSeq Acc Id: XM_055095765   ⟹   XP_054951740
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21065,100,292 - 65,113,424 (-)NCBI
NHGRI_mPanPan11265,100,037 - 65,109,818 (-)NCBI
RefSeq Acc Id: XM_063593097   ⟹   XP_063449167
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21065,100,292 - 65,114,959 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_003813782   ⟸   XM_003813734
- UniProtKB: A0A2R9A099 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008964556   ⟸   XM_008966308
- UniProtKB: A0A2R9A099 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_034791959   ⟸   XM_034936068
- UniProtKB: A0A2R9A099 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034791957   ⟸   XM_034936066
- UniProtKB: A0A2R9A099 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034791960   ⟸   XM_034936069
- UniProtKB: A0A2R9A099 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034791958   ⟸   XM_034936067
- UniProtKB: A0A2R9A099 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSPPAP00000009355   ⟸   ENSPPAT00000031996
RefSeq Acc Id: ENSPPAP00000009353   ⟸   ENSPPAT00000031994
RefSeq Acc Id: XP_054951740   ⟸   XM_055095765
- UniProtKB: A0A2R9A099 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063449167   ⟸   XM_063593097
- UniProtKB: A0A2R9A099 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000027904 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000031994.1 UniProtKB/TrEMBL
  ENSPPAT00000031996.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.150 UniProtKB/TrEMBL
InterPro SAM-dependent_MTases UniProtKB/TrEMBL
KEGG Report pps:100977545 UniProtKB/TrEMBL
NCBI Gene ETFBKMT ENTREZGENE
PANTHER ELECTRON TRANSFER FLAVOPROTEIN BETA SUBUNIT LYSINE METHYLTRANSFERASE UniProtKB/TrEMBL
  ELECTRON TRANSFER FLAVOPROTEIN BETA SUBUNIT LYSINE METHYLTRANSFERASE UniProtKB/TrEMBL
Pfam PrmA UniProtKB/TrEMBL
Superfamily-SCOP SSF53335 UniProtKB/TrEMBL
UniProt A0A2R8ZWK1_PANPA UniProtKB/TrEMBL
  A0A2R9A099 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-05-01 ETFBKMT  electron transfer flavoprotein subunit beta lysine methyltransferase    electron transfer flavoprotein beta subunit lysine methyltransferase  Symbol and/or name change 5135510 APPROVED