CAND2 (cullin associated and neddylation dissociated 2 (putative)) - Rat Genome Database

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Gene: CAND2 (cullin associated and neddylation dissociated 2 (putative)) Pan paniscus
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Symbol: CAND2
Name: cullin associated and neddylation dissociated 2 (putative)
RGD ID: 11870403
Description: ENCODES a protein that exhibits TBP-class protein binding (ortholog); INVOLVED IN SCF complex assembly (inferred); ASSOCIATED WITH Familial Cerebral Cavernous Malformation (ortholog); Postoperative Atrial Fibrillation (ortholog); FOUND IN nucleus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: cullin-associated NEDD8-dissociated protein 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1313,066,133 - 13,102,246 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl313,066,135 - 13,102,246 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0312,722,259 - 12,757,983 (+)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytosol  (IEA)
nucleus  (ISO)

Molecular Function

References

Genomics

Comparative Map Data
CAND2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1313,066,133 - 13,102,246 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl313,066,135 - 13,102,246 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0312,722,259 - 12,757,983 (+)NCBIMhudiblu_PPA_v0panPan3
CAND2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38312,796,680 - 12,834,803 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl312,796,472 - 12,834,804 (+)EnsemblGRCh38hg38GRCh38
GRCh37312,838,179 - 12,876,302 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36312,813,171 - 12,851,301 (+)NCBINCBI36hg18NCBI36
Celera312,776,461 - 12,814,604 (+)NCBI
Cytogenetic Map3p25.2NCBI
HuRef312,772,260 - 12,810,226 (+)NCBIHuRef
CHM1_1312,788,141 - 12,826,306 (+)NCBICHM1_1
T2T-CHM13v2.0312,798,170 - 12,836,312 (+)NCBI
Cand2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396115,751,518 - 115,782,516 (+)NCBIGRCm39mm39
GRCm39 Ensembl6115,751,499 - 115,782,518 (+)Ensembl
GRCm386115,774,557 - 115,805,555 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6115,774,538 - 115,805,557 (+)EnsemblGRCm38mm10GRCm38
MGSCv376115,724,575 - 115,755,573 (+)NCBIGRCm37mm9NCBIm37
MGSCv366115,740,194 - 115,770,488 (+)NCBImm8
Celera6117,614,220 - 117,645,199 (+)NCBICelera
Cytogenetic Map6E3NCBI
Cand2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.24148,835,050 - 148,864,039 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl4148,835,053 - 148,863,153 (+)Ensembl
Rnor_6.04147,686,487 - 147,714,593 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4147,686,490 - 147,714,585 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04210,970,266 - 210,998,152 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44151,912,174 - 151,940,734 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14152,157,014 - 152,185,575 (+)NCBI
Celera4137,725,100 - 137,753,194 (+)NCBICelera
Cytogenetic Map4q42NCBI
Cand2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542917,891,796 - 17,913,866 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542917,891,306 - 17,913,961 (-)NCBIChiLan1.0ChiLan1.0
CAND2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1205,756,576 - 5,789,892 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl205,757,566 - 5,811,408 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha205,793,865 - 5,827,176 (-)NCBI
ROS_Cfam_1.0205,786,186 - 5,819,576 (-)NCBI
ROS_Cfam_1.0 Ensembl205,787,164 - 5,820,601 (-)Ensembl
UMICH_Zoey_3.1205,502,290 - 5,535,612 (-)NCBI
UNSW_CanFamBas_1.0205,855,197 - 5,888,510 (-)NCBI
UU_Cfam_GSD_1.0205,830,851 - 5,864,169 (-)NCBI
Cand2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494217,900,816 - 17,922,373 (+)NCBI
SpeTri2.0NW_004936602987,292 - 1,008,825 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CAND2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1368,758,734 - 68,787,192 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11368,758,739 - 68,787,200 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21376,028,327 - 76,057,637 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CAND2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12248,771,419 - 48,809,911 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl2248,771,987 - 48,809,093 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666041117,679,110 - 117,717,259 (-)NCBIVero_WHO_p1.0
Cand2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624872404,495 - 429,322 (+)EnsemblHetGla_female_1.0hetGla2
HetGla 1.0NW_004624872404,263 - 429,866 (+)NCBIHetGla_female_1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003826247 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide SSBP01000020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSPPAT00000005021   ⟹   ENSPPAP00000001076
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl313,066,135 - 13,102,246 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000005056   ⟹   ENSPPAP00000001079
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl313,066,201 - 13,101,421 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000005126   ⟹   ENSPPAP00000001093
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl313,066,201 - 13,079,494 (+)Ensembl
RefSeq Acc Id: XM_003826247   ⟹   XP_003826295
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1313,066,135 - 13,102,246 (+)NCBI
Mhudiblu_PPA_v0312,722,259 - 12,757,983 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003826295 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_003826295   ⟸   XM_003826247
- Sequence:
RefSeq Acc Id: ENSPPAP00000001093   ⟸   ENSPPAT00000005126
RefSeq Acc Id: ENSPPAP00000001076   ⟸   ENSPPAT00000005021
RefSeq Acc Id: ENSPPAP00000001079   ⟸   ENSPPAT00000005056
Protein Domains
TIP120


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000004317 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSPPAP00000001076 ENTREZGENE
  ENSPPAP00000001076.1 UniProtKB/TrEMBL
  ENSPPAP00000001079.1 UniProtKB/TrEMBL
  ENSPPAP00000001093.1 UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000005021.1 UniProtKB/TrEMBL
  ENSPPAT00000005056.1 UniProtKB/TrEMBL
  ENSPPAT00000005126.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.10.10 UniProtKB/TrEMBL
InterPro ARM-like UniProtKB/TrEMBL
  ARM-type_fold UniProtKB/TrEMBL
  CAND1/CAND2 UniProtKB/TrEMBL
  TATA-bd_TIP120 UniProtKB/TrEMBL
KEGG Report pps:100970507 UniProtKB/TrEMBL
NCBI Gene CAND2 ENTREZGENE
PANTHER PTHR12696 UniProtKB/TrEMBL
Pfam TIP120 UniProtKB/TrEMBL
Superfamily-SCOP SSF48371 UniProtKB/TrEMBL
UniProt A0A2R8Z869_PANPA UniProtKB/TrEMBL
  A0A2R8Z8C1_PANPA UniProtKB/TrEMBL
  A0A2R8ZEN6_PANPA UniProtKB/TrEMBL