PRXL2C (peroxiredoxin like 2C) - Rat Genome Database

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Gene: PRXL2C (peroxiredoxin like 2C) Pan paniscus
Analyze
Symbol: PRXL2C
Name: peroxiredoxin like 2C
RGD ID: 11864730
Description: INVOLVED IN positive regulation of ERK1 and ERK2 cascade (ortholog); positive regulation of glycolytic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: AAED1; AhpC/TSA antioxidant enzyme domain containing 1; peroxiredoxin-like 2C; thioredoxin-like protein AAED1
RGD Orthologs
Human
Mouse
Rat
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21142,796,286 - 42,810,351 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1942,798,683 - 42,812,729 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0967,737,639 - 67,751,691 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1995,857,770 - 95,889,532 (-)NCBIpanpan1.1PanPan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

References

Genomics

Comparative Map Data
PRXL2C
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21142,796,286 - 42,810,351 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1942,798,683 - 42,812,729 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0967,737,639 - 67,751,691 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1995,857,770 - 95,889,532 (-)NCBIpanpan1.1PanPan1.1panPan2
PRXL2C
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38996,639,577 - 96,655,317 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl996,639,577 - 96,655,317 (-)EnsemblGRCh38hg38GRCh38
GRCh37999,401,859 - 99,417,599 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36998,443,354 - 98,457,420 (-)NCBINCBI36Build 36hg18NCBI36
Celera969,845,106 - 69,859,172 (-)NCBICelera
Cytogenetic Map9q22.33NCBI
HuRef969,014,734 - 69,028,253 (-)NCBIHuRef
CHM1_1999,550,355 - 99,564,421 (-)NCBICHM1_1
T2T-CHM13v2.09108,811,352 - 108,827,123 (-)NCBIT2T-CHM13v2.0
Prxl2c
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391364,437,612 - 64,460,524 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1364,423,094 - 64,460,524 (-)EnsemblGRCm39 Ensembl
GRCm381364,289,798 - 64,312,710 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1364,275,280 - 64,312,710 (-)EnsemblGRCm38mm10GRCm38
MGSCv371364,393,144 - 64,414,018 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361364,301,606 - 64,326,737 (-)NCBIMGSCv36mm8
Celera1365,956,327 - 65,976,100 (-)NCBICelera
Cytogenetic Map13B3NCBI
cM Map1333.26NCBI
Prxl2c
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr817817,932 - 849,965 (+)NCBIGRCr8
mRatBN7.217812,199 - 839,536 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl17812,213 - 844,075 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx17830,906 - 848,128 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0172,373,483 - 2,390,705 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.017828,334 - 845,556 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0171,798,224 - 1,830,011 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl171,798,388 - 1,830,001 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0171,787,497 - 1,819,908 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4176,336,052 - 6,370,548 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera171,672,532 - 1,704,457 (-)NCBICelera
Cytogenetic Map17p14NCBI
PRXL2C
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1170,199,278 - 70,209,026 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl170,199,357 - 70,208,534 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha170,962,502 - 70,972,184 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0170,487,981 - 70,508,109 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl170,498,486 - 70,509,863 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1170,312,093 - 70,321,759 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0170,074,911 - 70,084,654 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0170,786,250 - 70,795,855 (+)NCBIUU_Cfam_GSD_1.0
PRXL2C
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1025,428,164 - 25,446,185 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11025,428,129 - 25,444,609 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21076,570,687 - 76,584,991 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PRXL2C
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.112106,486,772 - 106,500,124 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl12106,486,811 - 106,499,618 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603894,883,326 - 94,897,531 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Prxl2c
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475317,901,544 - 17,918,042 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475317,901,281 - 17,922,146 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_034967830   ⟹   XP_034823721
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21142,796,286 - 42,810,351 (+)NCBI
NHGRI_mPanPan1942,798,683 - 42,812,729 (+)NCBI
Mhudiblu_PPA_v0967,737,639 - 67,751,691 (-)NCBI
RefSeq Acc Id: XM_063594301   ⟹   XP_063450371
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21142,796,290 - 42,810,351 (+)NCBI
Protein Sequences
Protein RefSeqs XP_034823721 (Get FASTA)   NCBI Sequence Viewer  
  XP_063450371 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_034823721   ⟸   XM_034967830
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063450371   ⟸   XM_063594301
- Peptide Label: isoform X2


Additional Information

Database Acc Id Source(s)
NCBI Gene AAED1 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-07-24 PRXL2C  peroxiredoxin like 2C  AAED1  AhpC/TSA antioxidant enzyme domain containing 1  Symbol and/or name change 5135510 APPROVED