CD101 (CD101 molecule) - Rat Genome Database

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Gene: CD101 (CD101 molecule) Pan paniscus
Analyze
Symbol: CD101
Name: CD101 molecule
RGD ID: 11862621
Description: ENCODES a protein that exhibits hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides (inferred); INVOLVED IN positive regulation of myeloid leukocyte differentiation (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: immunoglobulin superfamily member 2; LOC100974024
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21109,663,093 - 109,690,550 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11109,262,523 - 109,289,979 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0185,483,230 - 85,530,136 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11120,478,758 - 120,513,438 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1120,481,202 - 120,507,589 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
membrane  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
CD101
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21109,663,093 - 109,690,550 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11109,262,523 - 109,289,979 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0185,483,230 - 85,530,136 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11120,478,758 - 120,513,438 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1120,481,202 - 120,507,589 (-)Ensemblpanpan1.1panPan2
CD101
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381117,001,760 - 117,036,552 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1117,001,750 - 117,036,552 (+)EnsemblGRCh38hg38GRCh38
GRCh371117,544,382 - 117,579,174 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361117,345,905 - 117,380,690 (+)NCBINCBI36Build 36hg18NCBI36
Build 341117,256,475 - 117,291,081NCBI
Celera1115,772,964 - 115,807,759 (+)NCBICelera
Cytogenetic Map1p13.1NCBI
HuRef1115,403,023 - 115,437,673 (+)NCBIHuRef
CHM1_11117,659,288 - 117,694,094 (+)NCBICHM1_1
T2T-CHM13v2.01117,000,831 - 117,046,977 (+)NCBIT2T-CHM13v2.0
Cd101
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393100,899,505 - 100,936,869 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3100,900,845 - 100,936,872 (-)EnsemblGRCm39 Ensembl
GRCm383100,992,189 - 101,029,553 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3100,993,529 - 101,029,556 (-)EnsemblGRCm38mm10GRCm38
MGSCv373100,797,452 - 100,833,418 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv363101,122,590 - 101,152,906 (-)NCBIMGSCv36mm8
Celera3103,202,041 - 103,237,765 (-)NCBICelera
Cytogenetic Map3F2.2NCBI
cM Map343.9NCBI
Cd101
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82191,109,782 - 191,148,184 (-)NCBIGRCr8
mRatBN7.22188,422,989 - 188,459,536 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2188,422,351 - 188,459,502 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2196,060,481 - 196,096,995 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02193,912,850 - 193,949,373 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02188,739,612 - 188,776,110 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02203,376,593 - 203,413,894 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2203,376,593 - 203,413,125 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02222,826,291 - 222,863,501 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42196,044,303 - 196,080,877 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12196,007,056 - 196,040,243 (-)NCBI
Celera2180,866,260 - 180,903,155 (-)NCBICelera
Cytogenetic Map2q34NCBI
Cd101
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543520,103,716 - 20,142,983 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495543520,104,391 - 20,145,440 (+)NCBIChiLan1.0ChiLan1.0
CD101
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11754,391,572 - 54,427,350 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1754,392,165 - 54,425,620 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1754,037,467 - 54,073,227 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01755,272,010 - 55,307,652 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1755,272,514 - 55,305,829 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11754,308,349 - 54,344,172 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01754,345,105 - 54,380,924 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01754,920,541 - 54,956,260 (+)NCBIUU_Cfam_GSD_1.0
Cd101
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505812,333,956 - 12,380,258 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366272,127,929 - 2,154,862 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366272,121,312 - 2,154,880 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CD101
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl4103,693,883 - 103,735,581 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.14103,693,881 - 103,736,375 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24113,660,306 - 113,699,309 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CD101
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12016,691,368 - 16,727,001 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2016,693,215 - 16,718,258 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603819,364,921 - 19,393,309 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cd101
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462477212,688,773 - 12,723,040 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462477212,700,368 - 12,735,346 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSPPAT00000041882   ⟹   ENSPPAP00000019131
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1120,481,202 - 120,507,589 (-)Ensembl
RefSeq Acc Id: XM_055111095   ⟹   XP_054967070
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21109,663,093 - 109,690,550 (+)NCBI
NHGRI_mPanPan11109,262,523 - 109,289,979 (+)NCBI
Protein Sequences
Protein RefSeqs XP_054967070 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000019131.1
RefSeq Acc Id: ENSPPAP00000019131   ⟸   ENSPPAT00000041882
RefSeq Acc Id: XP_054967070   ⟸   XM_055111095
Protein Domains
Ig-like


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000032745 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000041882.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/TrEMBL
InterPro Dihydroorotase_CS UniProtKB/TrEMBL
  Ig-like_dom UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
  Ig_sub UniProtKB/TrEMBL
  Ig_V-set UniProtKB/TrEMBL
NCBI Gene CD101 ENTREZGENE
PANTHER IMMUNOGLOBULIN SUPERFAMILY MEMBER 2 UniProtKB/TrEMBL
  V-SET AND TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
Pfam V-set UniProtKB/TrEMBL
PROSITE DIHYDROOROTASE_1 UniProtKB/TrEMBL
  IG_LIKE UniProtKB/TrEMBL
SMART IGv UniProtKB/TrEMBL
  SM00409 UniProtKB/TrEMBL
Superfamily-SCOP SSF48726 UniProtKB/TrEMBL
UniProt A0A2R9AP47_PANPA UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-04-25 CD101  CD101 molecule  LOC100974024  immunoglobulin superfamily member 2  Symbol and/or name change 5135510 APPROVED
2020-07-01 LOC100974024  immunoglobulin superfamily member 2  CD101  CD101 molecule  Symbol and/or name change 5135510 APPROVED