MOBP (myelin associated oligodendrocyte basic protein) - Rat Genome Database

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Gene: MOBP (myelin associated oligodendrocyte basic protein) Pan paniscus
Analyze
Symbol: MOBP
Name: myelin associated oligodendrocyte basic protein
RGD ID: 11860564
Description: ENCODES a protein that exhibits structural constituent of myelin sheath (ortholog); INVOLVED IN central nervous system myelin formation (ortholog); nervous system development (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); angiostrongyliasis (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); FOUND IN cortical actin cytoskeleton (inferred); cytoplasm (inferred); mitochondrion (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2239,427,476 - 39,494,355 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1339,432,238 - 39,499,116 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0339,372,102 - 39,450,066 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1339,651,728 - 39,715,632 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl339,688,104 - 39,699,486 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
MOBP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2239,427,476 - 39,494,355 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1339,432,238 - 39,499,116 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0339,372,102 - 39,450,066 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1339,651,728 - 39,715,632 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl339,688,104 - 39,699,486 (+)Ensemblpanpan1.1panPan2
MOBP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38339,467,680 - 39,529,497 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl339,467,198 - 39,529,479 (+)EnsemblGRCh38hg38GRCh38
GRCh37339,509,171 - 39,570,988 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36339,484,074 - 39,542,863 (+)NCBINCBI36Build 36hg18NCBI36
Build 34339,518,557 - 39,540,989NCBI
Celera339,450,698 - 39,509,485 (+)NCBICelera
Cytogenetic Map3p22.1NCBI
HuRef339,552,592 - 39,614,603 (+)NCBIHuRef
CHM1_1339,460,108 - 39,522,029 (+)NCBICHM1_1
T2T-CHM13v2.0339,480,633 - 39,542,424 (+)NCBIT2T-CHM13v2.0
Mobp
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399119,978,740 - 120,010,554 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9119,978,773 - 120,010,550 (+)EnsemblGRCm39 Ensembl
GRCm389120,149,742 - 120,181,488 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9120,149,707 - 120,181,484 (+)EnsemblGRCm38mm10GRCm38
MGSCv379120,058,860 - 120,085,209 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv369119,998,440 - 120,030,182 (+)NCBIMGSCv36mm8
Celera9120,618,557 - 120,644,888 (+)NCBICelera
Cytogenetic Map9F4NCBI
cM Map971.41NCBI
Mobp
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88128,747,117 - 128,777,238 (+)NCBIGRCr8
mRatBN7.28119,869,504 - 119,899,605 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8119,869,626 - 119,899,563 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx8125,449,916 - 125,475,469 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08123,648,952 - 123,674,506 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08121,489,423 - 121,515,242 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.08128,824,420 - 128,854,492 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8128,824,508 - 128,850,358 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08128,025,119 - 128,055,171 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48125,118,618 - 125,144,099 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.18125,138,354 - 125,163,833 (+)NCBI
Celera8119,014,616 - 119,040,060 (+)NCBICelera
Cytogenetic Map8q32NCBI
Mobp
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495542029,902,036 - 29,957,364 (-)NCBIChiLan1.0ChiLan1.0
MOBP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1239,121,277 - 9,176,128 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl239,121,319 - 9,161,972 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha239,156,665 - 9,211,227 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0239,406,125 - 9,460,980 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl239,406,083 - 9,460,975 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1239,219,099 - 9,273,643 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0239,362,022 - 9,416,643 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0239,355,681 - 9,409,917 (+)NCBIUU_Cfam_GSD_1.0
Mobp
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118195,525,415 - 195,572,004 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647328,689,242 - 28,697,772 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647328,663,986 - 28,709,394 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MOBP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11324,138,078 - 24,186,838 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21326,450,254 - 26,497,554 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MOBP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1221,041,714 - 1,077,514 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl221,041,783 - 1,079,241 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041166,166,889 - 166,222,254 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mobp
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473078,762,075 - 78,773,422 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473078,759,681 - 78,794,632 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000035590   ⟹   ENSPPAP00000012923
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl339,688,104 - 39,699,486 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000035592   ⟹   ENSPPAP00000012925
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl339,688,104 - 39,699,447 (+)Ensembl
RefSeq Acc Id: XM_034956159   ⟹   XP_034812050
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2239,427,477 - 39,494,355 (+)NCBI
NHGRI_mPanPan1339,432,239 - 39,499,116 (+)NCBI
Mhudiblu_PPA_v0339,372,102 - 39,439,072 (+)NCBI
RefSeq Acc Id: XM_034956163   ⟹   XP_034812054
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2239,427,476 - 39,494,355 (+)NCBI
NHGRI_mPanPan1339,432,238 - 39,499,116 (+)NCBI
Mhudiblu_PPA_v0339,372,102 - 39,439,072 (+)NCBI
RefSeq Acc Id: XM_034956164   ⟹   XP_034812055
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2239,427,477 - 39,484,780 (+)NCBI
NHGRI_mPanPan1339,432,239 - 39,484,613 (+)NCBI
Mhudiblu_PPA_v0339,372,102 - 39,424,550 (+)NCBI
RefSeq Acc Id: XM_034956166   ⟹   XP_034812057
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2239,427,477 - 39,494,355 (+)NCBI
NHGRI_mPanPan1339,432,239 - 39,499,116 (+)NCBI
Mhudiblu_PPA_v0339,372,102 - 39,439,072 (+)NCBI
Protein Sequences
Protein RefSeqs XP_034812050 (Get FASTA)   NCBI Sequence Viewer  
  XP_034812054 (Get FASTA)   NCBI Sequence Viewer  
  XP_034812055 (Get FASTA)   NCBI Sequence Viewer  
  XP_034812057 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000012923.1
  ENSPPAP00000012925.1
Reference Protein Sequences
RefSeq Acc Id: XP_034812054   ⟸   XM_034956163
- Peptide Label: isoform X1
- UniProtKB: A0A2R9A7Q9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034812057   ⟸   XM_034956166
- Peptide Label: isoform X2
- UniProtKB: A0A2R9A7Q9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034812050   ⟸   XM_034956159
- Peptide Label: isoform X1
- UniProtKB: A0A2R9A7Q9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034812055   ⟸   XM_034956164
- Peptide Label: isoform X1
- UniProtKB: A0A2R9A7Q9 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSPPAP00000012923   ⟸   ENSPPAT00000035590
RefSeq Acc Id: ENSPPAP00000012925   ⟸   ENSPPAT00000035592
Protein Domains
FYVE-type zinc finger


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000029626 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000035590.1 UniProtKB/TrEMBL
  ENSPPAT00000035592.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.40.10 UniProtKB/TrEMBL
InterPro FYVE_2 UniProtKB/TrEMBL
  Znf_RING/FYVE/PHD UniProtKB/TrEMBL
NCBI Gene MOBP ENTREZGENE
PANTHER MYELIN-ASSOCIATED OLIGODENDROCYTIC BASIC PROTEIN MOBP -RELATED UniProtKB/TrEMBL
  RAB EFFECTOR MYRIP UniProtKB/TrEMBL
Pfam FYVE_2 UniProtKB/TrEMBL
UniProt A0A2R9A6K4_PANPA UniProtKB/TrEMBL
  A0A2R9A7Q9 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-02-19 MOBP  myelin associated oligodendrocyte basic protein    myelin-associated oligodendrocyte basic protein  Symbol and/or name change 5135510 APPROVED