ZNF614 (zinc finger protein 614) - Rat Genome Database

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Gene: ZNF614 (zinc finger protein 614) Pan paniscus
Analyze
Symbol: ZNF614
Name: zinc finger protein 614
RGD ID: 11853869
Description: ENCODES a protein that exhibits metal ion binding (inferred); INVOLVED IN regulation of DNA-templated transcription (inferred); ASSOCIATED WITH genetic disease (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22058,055,877 - 58,075,064 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11959,979,630 - 59,999,367 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01948,956,505 - 48,973,974 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11957,837,750 - 57,853,270 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1957,838,022 - 57,845,632 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
ZNF614
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22058,055,877 - 58,075,064 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11959,979,630 - 59,999,367 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01948,956,505 - 48,973,974 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11957,837,750 - 57,853,270 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1957,838,022 - 57,845,632 (-)Ensemblpanpan1.1panPan2
ZNF614
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381952,013,324 - 52,028,379 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1952,012,765 - 52,030,240 (-)EnsemblGRCh38hg38GRCh38
GRCh371952,516,577 - 52,531,632 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361957,208,389 - 57,223,429 (-)NCBINCBI36Build 36hg18NCBI36
Build 341957,208,389 - 57,223,429NCBI
Celera1949,566,135 - 49,581,238 (-)NCBICelera
Cytogenetic Map19q13.41NCBI
HuRef1948,847,221 - 48,862,324 (-)NCBIHuRef
CHM1_11952,518,435 - 52,533,538 (-)NCBICHM1_1
T2T-CHM13v2.01955,100,522 - 55,115,577 (-)NCBIT2T-CHM13v2.0
LOC100685226
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11105,139,160 - 105,173,050 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1105,121,771 - 105,173,076 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1104,693,711 - 104,746,674 (-)NCBIDog10K_Boxer_Tasha
Znf614
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244093494,647,872 - 4,658,700 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004937026249,067 - 255,090 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004937026247,234 - 252,553 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF614
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl658,102,159 - 58,134,729 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1658,098,667 - 58,134,944 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2652,055,532 - 52,103,556 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ZNF614
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1644,827,365 - 44,844,255 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607324,884,708 - 24,901,423 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000019933   ⟹   ENSPPAP00000004323
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1957,838,022 - 57,845,632 (-)Ensembl
RefSeq Acc Id: XM_008966237   ⟹   XP_008964485
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22058,055,877 - 58,075,064 (-)NCBI
NHGRI_mPanPan11959,979,630 - 59,999,367 (-)NCBI
Mhudiblu_PPA_v01948,956,505 - 48,973,974 (-)NCBI
PanPan1.11957,837,750 - 57,853,270 (-)NCBI
Sequence:
RefSeq Acc Id: XM_034944812   ⟹   XP_034800703
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22058,055,877 - 58,072,338 (-)NCBI
NHGRI_mPanPan11959,979,630 - 59,996,645 (-)NCBI
Mhudiblu_PPA_v01948,956,505 - 48,972,945 (-)NCBI
Protein Sequences
Protein RefSeqs XP_008964485 (Get FASTA)   NCBI Sequence Viewer  
  XP_034800703 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000004323
  ENSPPAP00000004323.1
Reference Protein Sequences
RefSeq Acc Id: XP_008964485   ⟸   XM_008966237
- Sequence:
RefSeq Acc Id: XP_034800703   ⟸   XM_034944812
RefSeq Acc Id: ENSPPAP00000004323   ⟸   ENSPPAT00000019933
Protein Domains
C2H2-type   KRAB


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000018205 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000019933.1 UniProtKB/TrEMBL
Gene3D-CATH 6.10.140.140 UniProtKB/TrEMBL
  Classic Zinc Finger UniProtKB/TrEMBL
InterPro KRAB UniProtKB/TrEMBL
  KRAB_dom_sf UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/TrEMBL
NCBI Gene ZNF614 ENTREZGENE
PANTHER KRAB DOMAIN C2H2 ZINC FINGER UniProtKB/TrEMBL
  KRAB DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
Pfam KRAB UniProtKB/TrEMBL
  zf-C2H2 UniProtKB/TrEMBL
PROSITE KRAB UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
SMART KRAB UniProtKB/TrEMBL
  ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP SSF109640 UniProtKB/TrEMBL
  SSF57667 UniProtKB/TrEMBL
UniProt A0A2R8ZNG1_PANPA UniProtKB/TrEMBL