PIH1D1 (PIH1 domain containing 1) - Rat Genome Database

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Gene: PIH1D1 (PIH1 domain containing 1) Pan paniscus
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Symbol: PIH1D1
Name: PIH1 domain containing 1
RGD ID: 11852753
Description: ENCODES a protein that exhibits RNA polymerase I cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN regulation of TORC2 signaling (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 12 (ortholog); FOUND IN R2TP complex (ortholog); RPAP3/R2TP/prefoldin-like complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: PIH1 domain-containing protein 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11955,382,078 - 55,387,663 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1955,381,803 - 55,387,664 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01946,459,855 - 46,465,882 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References

Genomics

Comparative Map Data
PIH1D1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11955,382,078 - 55,387,663 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1955,381,803 - 55,387,664 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01946,459,855 - 46,465,882 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PIH1D1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381949,446,298 - 49,451,814 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl1949,446,298 - 49,453,497 (-)EnsemblGRCh38hg38GRCh38
GRCh371949,949,555 - 49,955,071 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361954,641,368 - 54,646,879 (-)NCBINCBI36Build 36hg18NCBI36
Celera1946,817,056 - 46,822,614 (-)NCBICelera
Cytogenetic Map19q13.33NCBI
HuRef1946,326,202 - 46,331,760 (-)NCBIHuRef
CHM1_11949,951,377 - 49,956,935 (-)NCBICHM1_1
T2T-CHM13v2.01952,443,763 - 52,449,272 (-)NCBIT2T-CHM13v2.0
Pih1d1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39744,800,036 - 44,809,489 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl744,803,727 - 44,809,489 (+)EnsemblGRCm39 Ensembl
GRCm38745,150,613 - 45,160,065 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl745,154,303 - 45,160,065 (+)EnsemblGRCm38mm10GRCm38
MGSCv37752,409,768 - 52,415,434 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36745,022,440 - 45,028,106 (+)NCBIMGSCv36mm8
Celera740,610,286 - 40,615,950 (+)NCBICelera
Cytogenetic Map7B3NCBI
Pih1d1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2195,639,597 - 95,645,295 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl195,639,592 - 95,645,290 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1101,026,613 - 101,030,686 (+)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.01109,499,280 - 109,503,353 (+)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.01102,789,689 - 102,793,758 (+)NCBIRnor_WKY
Rnor_6.01101,151,240 - 101,156,806 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1101,152,734 - 101,156,805 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01102,216,207 - 102,221,753 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4195,632,212 - 95,636,284 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1195,710,322 - 95,714,394 (+)NCBI
Celera189,899,502 - 89,903,575 (+)NCBICelera
Cytogenetic Map1q22NCBI
Pih1d1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555591,391,314 - 1,396,329 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555591,390,823 - 1,395,550 (+)NCBIChiLan1.0ChiLan1.0
PIH1D1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11107,045,466 - 107,051,281 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1107,045,697 - 107,051,236 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1106,628,774 - 106,634,554 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01107,565,568 - 107,571,349 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1107,565,763 - 107,571,345 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11107,238,579 - 107,244,359 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01106,880,914 - 106,886,696 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01107,721,786 - 107,727,567 (+)NCBIUU_Cfam_GSD_1.0
Pih1d1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934921,703,088 - 21,708,453 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366643,321,136 - 3,326,093 (-)EnsemblSpeTri2.0
SpeTri2.0NW_0049366643,321,278 - 3,326,720 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PIH1D1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl654,524,172 - 54,535,249 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1654,524,172 - 54,529,700 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2650,253,127 - 50,258,631 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PIH1D1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1642,627,125 - 42,633,467 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl642,627,097 - 42,632,932 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607322,554,872 - 22,561,331 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pih1d1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248324,757,344 - 4,762,181 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248324,757,367 - 4,761,974 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000047611   ⟹   ENSPPAP00000024786
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1955,381,803 - 55,387,362 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000047614   ⟹   ENSPPAP00000024789
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1955,382,078 - 55,387,664 (-)Ensembl
RefSeq Acc Id: XM_003814326   ⟹   XP_003814374
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.11955,382,078 - 55,387,660 (-)NCBI
Mhudiblu_PPA_v01946,459,855 - 46,465,389 (-)NCBI
Sequence:
RefSeq Acc Id: XM_034945137   ⟹   XP_034801028
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01946,460,209 - 46,465,882 (-)NCBI
Protein Sequences
Protein RefSeqs XP_003814374 (Get FASTA)   NCBI Sequence Viewer  
  XP_034801028 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_003814374   ⟸   XM_003814326
- Peptide Label: isoform X1
- UniProtKB: A0A2J8K2N4 (UniProtKB/TrEMBL),   A0A2R9BCA5 (UniProtKB/TrEMBL),   A0A6D2W257 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_034801028   ⟸   XM_034945137
- Peptide Label: isoform X2
RefSeq Acc Id: ENSPPAP00000024789   ⟸   ENSPPAT00000047614
RefSeq Acc Id: ENSPPAP00000024786   ⟸   ENSPPAT00000047611
Protein Domains
PIH1   PIH1_CS


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000035526 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSPPAP00000024786.1 UniProtKB/TrEMBL
  ENSPPAP00000024789 ENTREZGENE
  ENSPPAP00000024789.1 UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000047611.1 UniProtKB/TrEMBL
  ENSPPAT00000047614.1 UniProtKB/TrEMBL
InterPro PIH1_N UniProtKB/TrEMBL
  PIH1D1/2/3_CS-like UniProtKB/TrEMBL
KEGG Report pps:100973275 UniProtKB/TrEMBL
NCBI Gene PIH1D1 ENTREZGENE
Pfam PIH1 UniProtKB/TrEMBL
  PIH1_CS UniProtKB/TrEMBL
UniProt A0A2J8K2N4 ENTREZGENE
  A0A2R9B6U9_PANPA UniProtKB/TrEMBL
  A0A2R9BCA5 ENTREZGENE, UniProtKB/TrEMBL
  A0A6D2W257 ENTREZGENE