ZNF746 (zinc finger protein 746) - Rat Genome Database

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Gene: ZNF746 (zinc finger protein 746) Pan paniscus
Analyze
Symbol: ZNF746
Name: zinc finger protein 746
RGD ID: 11847896
Description: ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); protein heterooligomerization (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cytoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26186,061,135 - 186,086,452 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1738,071,399 - 38,096,715 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v07141,204,918 - 141,230,220 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17153,680,553 - 153,705,623 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7153,682,142 - 153,705,552 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
ZNF746
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26186,061,135 - 186,086,452 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1738,071,399 - 38,096,715 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v07141,204,918 - 141,230,220 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17153,680,553 - 153,705,623 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7153,682,142 - 153,705,552 (-)Ensemblpanpan1.1panPan2
ZNF746
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387149,472,696 - 149,497,809 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7149,472,696 - 149,497,817 (-)EnsemblGRCh38hg38GRCh38
GRCh377149,169,787 - 149,194,900 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 367148,800,818 - 148,825,727 (-)NCBINCBI36Build 36hg18NCBI36
Celera7143,839,142 - 143,864,156 (-)NCBICelera
Cytogenetic Map7q36.1NCBI
HuRef7143,246,332 - 143,271,282 (-)NCBIHuRef
CHM1_17149,178,475 - 149,203,485 (-)NCBICHM1_1
T2T-CHM13v2.07150,654,556 - 150,679,673 (-)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27148,507,917 - 148,532,930 (-)NCBI
Zfp746
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39648,039,325 - 48,064,275 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl648,039,329 - 48,063,527 (-)EnsemblGRCm39 Ensembl
GRCm38648,062,391 - 48,086,986 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl648,062,395 - 48,086,593 (-)EnsemblGRCm38mm10GRCm38
MGSCv37648,012,394 - 48,036,592 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36647,991,981 - 48,038,967 (-)NCBIMGSCv36mm8
Celera648,592,632 - 48,616,924 (-)NCBICelera
Cytogenetic Map6B2.3NCBI
cM Map623.04NCBI
Zfp746
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8478,385,945 - 78,410,240 (-)NCBIGRCr8
mRatBN7.2477,055,008 - 77,078,968 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl477,055,008 - 77,078,897 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx482,268,265 - 82,292,134 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0478,042,583 - 78,066,452 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0476,484,064 - 76,507,934 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0477,723,182 - 77,747,511 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl477,723,183 - 77,747,070 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04142,392,263 - 142,416,597 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4476,183,287 - 76,206,969 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1476,459,416 - 76,485,367 (-)NCBI
Celera472,002,645 - 72,026,531 (-)NCBICelera
Cytogenetic Map4q24NCBI
Znf746
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554914,619,962 - 4,642,546 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554914,619,962 - 4,642,357 (-)NCBIChiLan1.0ChiLan1.0
ZNF746
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11614,404,236 - 14,426,586 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1615,012,481 - 15,037,161 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01616,118,437 - 16,143,141 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1616,119,473 - 16,142,517 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11614,498,722 - 14,523,361 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01615,079,550 - 15,104,181 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01615,129,561 - 15,154,239 (-)NCBIUU_Cfam_GSD_1.0
Znf746
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244051187,403,340 - 7,422,255 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365275,479,883 - 5,498,687 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365275,481,178 - 5,500,116 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF746
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11855,663,495 - 55,684,576 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21860,989,510 - 61,010,274 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ZNF746
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.121118,032,767 - 118,058,205 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl21118,034,356 - 118,058,029 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607213,985,848 - 14,011,306 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Znf746
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248006,389,282 - 6,413,380 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248006,389,548 - 6,413,380 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000051062   ⟹   ENSPPAP00000028216
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl7153,682,142 - 153,705,552 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000051067   ⟹   ENSPPAP00000028221
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl7153,699,930 - 153,705,552 (-)Ensembl
RefSeq Acc Id: XM_008973948   ⟹   XP_008972196
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v26186,061,135 - 186,086,452 (-)NCBI
NHGRI_mPanPan1738,071,399 - 38,096,715 (-)NCBI
Mhudiblu_PPA_v07141,204,918 - 141,230,218 (-)NCBI
PanPan1.17153,680,553 - 153,705,623 (-)NCBI
Sequence:
RefSeq Acc Id: XM_034965184   ⟹   XP_034821075
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v26186,061,135 - 186,086,452 (-)NCBI
NHGRI_mPanPan1738,071,399 - 38,096,715 (-)NCBI
Mhudiblu_PPA_v07141,204,918 - 141,230,212 (-)NCBI
RefSeq Acc Id: XM_034965185   ⟹   XP_034821076
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v26186,061,135 - 186,086,452 (-)NCBI
NHGRI_mPanPan1738,071,399 - 38,096,715 (-)NCBI
Mhudiblu_PPA_v07141,204,918 - 141,230,220 (-)NCBI
RefSeq Acc Id: XM_034965187   ⟹   XP_034821078
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v26186,061,135 - 186,086,452 (-)NCBI
NHGRI_mPanPan1738,071,399 - 38,096,715 (-)NCBI
Mhudiblu_PPA_v07141,204,918 - 141,230,220 (-)NCBI
Protein Sequences
Protein RefSeqs XP_008972196 (Get FASTA)   NCBI Sequence Viewer  
  XP_034821075 (Get FASTA)   NCBI Sequence Viewer  
  XP_034821076 (Get FASTA)   NCBI Sequence Viewer  
  XP_034821078 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000028216.1
  ENSPPAP00000028221.1
Reference Protein Sequences
RefSeq Acc Id: XP_008972196   ⟸   XM_008973948
- Peptide Label: isoform X3
- UniProtKB: A0A2R9BNK3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_034821078   ⟸   XM_034965187
- Peptide Label: isoform X4
- UniProtKB: A0A2R9BNK3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034821076   ⟸   XM_034965185
- Peptide Label: isoform X2
- UniProtKB: A0A2R9BNK3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034821075   ⟸   XM_034965184
- Peptide Label: isoform X1
- UniProtKB: A0A2R9BNK3 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSPPAP00000028216   ⟸   ENSPPAT00000051062
RefSeq Acc Id: ENSPPAP00000028221   ⟸   ENSPPAT00000051067
Protein Domains
C2H2-type   KRAB


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000037165 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000051062.1 UniProtKB/TrEMBL
  ENSPPAT00000051067.1 UniProtKB/TrEMBL
Gene3D-CATH 6.10.140.140 UniProtKB/TrEMBL
  Classic Zinc Finger UniProtKB/TrEMBL
InterPro KRAB UniProtKB/TrEMBL
  KRAB_dom_sf UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/TrEMBL
NCBI Gene ZNF746 ENTREZGENE
PANTHER KRAB DOMAIN C2H2 ZINC FINGER UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 746-RELATED UniProtKB/TrEMBL
Pfam KRAB UniProtKB/TrEMBL
  zf-C2H2 UniProtKB/TrEMBL
PROSITE KRAB UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
SMART KRAB UniProtKB/TrEMBL
  ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP SSF109640 UniProtKB/TrEMBL
  SSF57667 UniProtKB/TrEMBL
UniProt A0A2R9BNK3 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9BNK5_PANPA UniProtKB/TrEMBL