DNAI2 (dynein axonemal intermediate chain 2) - Rat Genome Database

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Gene: DNAI2 (dynein axonemal intermediate chain 2) Pan paniscus
Analyze
Symbol: DNAI2
Name: dynein axonemal intermediate chain 2
RGD ID: 11839446
Description: ENCODES a protein that exhibits dynein heavy chain binding (inferred); dynein light chain binding (inferred); microtubule motor activity (inferred); INVOLVED IN cilium assembly (ortholog); cilium movement (ortholog); determination of left/right symmetry (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); Kartagener syndrome (ortholog); FOUND IN 9+2 motile cilium (inferred); axonemal dynein complex (inferred); axoneme (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: dynein intermediate chain 2, axonemal
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21990,304,170 - 90,345,791 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11795,126,576 - 95,168,188 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01768,212,341 - 68,253,732 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11773,770,753 - 73,811,845 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1773,770,753 - 73,811,845 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
DNAI2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21990,304,170 - 90,345,791 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11795,126,576 - 95,168,188 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01768,212,341 - 68,253,732 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11773,770,753 - 73,811,845 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1773,770,753 - 73,811,845 (+)Ensemblpanpan1.1panPan2
DNAI2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381774,274,234 - 74,314,884 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1774,274,234 - 74,314,884 (+)EnsemblGRCh38hg38GRCh38
GRCh371772,270,373 - 72,311,023 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361769,782,007 - 69,822,618 (+)NCBINCBI36Build 36hg18NCBI36
Build 341769,789,245 - 69,822,617NCBI
Celera1768,862,977 - 68,903,740 (+)NCBICelera
Cytogenetic Map17q25.1NCBI
HuRef1767,680,718 - 67,720,707 (+)NCBIHuRef
CHM1_11772,334,947 - 72,375,682 (+)NCBICHM1_1
T2T-CHM13v2.01775,165,033 - 75,205,531 (+)NCBIT2T-CHM13v2.0
Dnai2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911114,614,634 - 114,648,715 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11114,618,234 - 114,648,715 (+)EnsemblGRCm39 Ensembl
GRCm3811114,721,341 - 114,757,889 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11114,727,408 - 114,757,889 (+)EnsemblGRCm38mm10GRCm38
MGSCv3711114,588,726 - 114,619,200 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3611114,545,238 - 114,551,798 (+)NCBIMGSCv36mm8
Celera11126,487,738 - 126,518,931 (+)NCBICelera
Cytogenetic Map11E2NCBI
cM Map1180.19NCBI
Dnai2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr810100,259,022 - 100,292,427 (+)NCBIGRCr8
mRatBN7.21099,759,966 - 99,793,379 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1099,759,966 - 99,793,378 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx10104,818,343 - 104,851,989 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.010104,281,454 - 104,315,106 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01099,681,017 - 99,714,437 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.010103,266,343 - 103,301,521 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl10103,266,296 - 103,301,544 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.010102,925,918 - 102,959,579 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.410104,606,688 - 104,641,181 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.110104,621,191 - 104,655,684 (+)NCBI
Celera1098,350,675 - 98,383,762 (+)NCBICelera
Cytogenetic Map10q32.1NCBI
Dnai2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555531,188,279 - 1,212,053 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555531,188,279 - 1,212,053 (+)NCBIChiLan1.0ChiLan1.0
DNAI2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.196,085,021 - 6,114,187 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl96,085,459 - 6,114,351 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha96,706,851 - 6,735,967 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.096,757,488 - 6,786,578 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl96,757,914 - 6,786,618 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.196,797,985 - 6,827,061 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.096,901,554 - 6,930,610 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.096,961,473 - 6,990,611 (-)NCBIUU_Cfam_GSD_1.0
Dnai2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244056026,665,719 - 6,697,307 (-)NCBIHiC_Itri_2
SpeTri2.0NW_004936655163,565 - 188,431 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DNAI2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl126,809,335 - 6,832,766 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1126,808,966 - 6,832,767 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2126,776,343 - 6,799,288 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DNAI2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11647,318,477 - 47,348,767 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1647,319,138 - 47,348,839 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607718,131,998 - 18,167,196 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dnai2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248014,252,814 - 4,280,227 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248014,252,779 - 4,284,432 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000054714   ⟹   ENSPPAP00000031849
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1773,770,753 - 73,811,845 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000054724   ⟹   ENSPPAP00000031859
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1773,782,588 - 73,811,152 (+)Ensembl
RefSeq Acc Id: XM_003813352   ⟹   XP_003813400
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21990,304,170 - 90,345,791 (+)NCBI
NHGRI_mPanPan11795,126,576 - 95,168,188 (+)NCBI
Mhudiblu_PPA_v01768,212,341 - 68,253,732 (+)NCBI
PanPan1.11773,770,753 - 73,811,845 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024926160   ⟹   XP_024781928
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21990,304,170 - 90,345,775 (+)NCBI
NHGRI_mPanPan11795,126,576 - 95,168,187 (+)NCBI
Mhudiblu_PPA_v01768,212,341 - 68,253,732 (+)NCBI
PanPan1.11773,770,753 - 73,811,845 (+)NCBI
Sequence:
RefSeq Acc Id: XM_034942816   ⟹   XP_034798707
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21990,304,170 - 90,345,788 (+)NCBI
NHGRI_mPanPan11795,126,576 - 95,168,187 (+)NCBI
Mhudiblu_PPA_v01768,212,341 - 68,253,732 (+)NCBI
RefSeq Acc Id: XM_055101458   ⟹   XP_054957433
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21990,304,170 - 90,345,789 (+)NCBI
NHGRI_mPanPan11795,126,576 - 95,168,188 (+)NCBI
RefSeq Acc Id: XM_055101459   ⟹   XP_054957434
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21990,304,170 - 90,345,789 (+)NCBI
NHGRI_mPanPan11795,126,576 - 95,168,188 (+)NCBI
RefSeq Acc Id: XM_055101460   ⟹   XP_054957435
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21990,304,170 - 90,345,789 (+)NCBI
NHGRI_mPanPan11795,126,576 - 95,168,188 (+)NCBI
RefSeq Acc Id: XM_055101461   ⟹   XP_054957436
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21990,304,170 - 90,345,789 (+)NCBI
NHGRI_mPanPan11795,126,576 - 95,168,188 (+)NCBI
RefSeq Acc Id: XM_055101462   ⟹   XP_054957437
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21990,304,170 - 90,345,789 (+)NCBI
NHGRI_mPanPan11795,126,576 - 95,168,188 (+)NCBI
RefSeq Acc Id: XM_055101463   ⟹   XP_054957438
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21990,304,170 - 90,345,789 (+)NCBI
NHGRI_mPanPan11795,126,576 - 95,168,188 (+)NCBI
RefSeq Acc Id: XM_055101464   ⟹   XP_054957439
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21990,304,170 - 90,345,283 (+)NCBI
NHGRI_mPanPan11795,126,576 - 95,167,822 (+)NCBI
RefSeq Acc Id: XM_055101465   ⟹   XP_054957440
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21990,304,170 - 90,345,788 (+)NCBI
NHGRI_mPanPan11795,126,576 - 95,168,187 (+)NCBI
RefSeq Acc Id: XM_055101466   ⟹   XP_054957441
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21990,304,170 - 90,345,788 (+)NCBI
NHGRI_mPanPan11795,126,576 - 95,168,187 (+)NCBI
RefSeq Acc Id: XM_055101467   ⟹   XP_054957442
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21990,304,170 - 90,345,788 (+)NCBI
NHGRI_mPanPan11795,126,576 - 95,168,187 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_003813400   ⟸   XM_003813352
- Peptide Label: isoform X1
- UniProtKB: A0A2R9BTS3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_024781928   ⟸   XM_024926160
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_034798707   ⟸   XM_034942816
- Peptide Label: isoform X3
RefSeq Acc Id: ENSPPAP00000031859   ⟸   ENSPPAT00000054724
RefSeq Acc Id: ENSPPAP00000031849   ⟸   ENSPPAT00000054714
RefSeq Acc Id: XP_054957435   ⟸   XM_055101460
- Peptide Label: isoform X1
- UniProtKB: A0A2R9BTS3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054957436   ⟸   XM_055101461
- Peptide Label: isoform X1
- UniProtKB: A0A2R9BTS3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054957438   ⟸   XM_055101463
- Peptide Label: isoform X1
- UniProtKB: A0A2R9BTS3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054957434   ⟸   XM_055101459
- Peptide Label: isoform X1
- UniProtKB: A0A2R9BTS3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054957437   ⟸   XM_055101462
- Peptide Label: isoform X1
- UniProtKB: A0A2R9BTS3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054957433   ⟸   XM_055101458
- Peptide Label: isoform X1
- UniProtKB: A0A2R9BTS3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054957441   ⟸   XM_055101466
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054957442   ⟸   XM_055101467
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054957440   ⟸   XM_055101465
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054957439   ⟸   XM_055101464
- Peptide Label: isoform X1
- UniProtKB: A0A2R9BTS3 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000038808 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000054714.1 UniProtKB/TrEMBL
  ENSPPAT00000054724.1 UniProtKB/TrEMBL
Gene3D-CATH 2.130.10.10 UniProtKB/TrEMBL
InterPro WD40/YVTN_repeat-like_dom_sf UniProtKB/TrEMBL
  WD40_repeat UniProtKB/TrEMBL
  WD40_repeat_dom_sf UniProtKB/TrEMBL
KEGG Report pps:100983174 UniProtKB/TrEMBL
NCBI Gene DNAI2 ENTREZGENE
PANTHER DYNEIN AXONEMAL INTERMEDIATE CHAIN 2 UniProtKB/TrEMBL
  DYNEIN INTERMEDIATE CHAIN UniProtKB/TrEMBL
Pfam WD40 UniProtKB/TrEMBL
SMART WD40 UniProtKB/TrEMBL
Superfamily-SCOP SSF50978 UniProtKB/TrEMBL
UniProt A0A2R9BTS3 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9BTT3_PANPA UniProtKB/TrEMBL