PPP1R3D (protein phosphatase 1 regulatory subunit 3D) - Rat Genome Database

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Gene: PPP1R3D (protein phosphatase 1 regulatory subunit 3D) Pan paniscus
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Symbol: PPP1R3D
Name: protein phosphatase 1 regulatory subunit 3D
RGD ID: 11835859
Description: ENCODES a protein that exhibits enzyme binding (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN regulation of glycogen biosynthetic process (ortholog); regulation of glycogen catabolic process (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; glycogen biosynthetic pathway; glycogen degradation pathway; FOUND IN glycogen granule (ortholog); intracellular membrane-bounded organelle (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12057,644,184 - 57,647,585 (-)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v02056,292,457 - 56,295,977 (-)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Genomics

Comparative Map Data
PPP1R3D
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12057,644,184 - 57,647,585 (-)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v02056,292,457 - 56,295,977 (-)NCBIMhudiblu_PPA_v0panPan3
PPP1R3D
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl2059,936,663 - 59,940,305 (-)EnsemblGRCh38hg38GRCh38
GRCh382059,936,663 - 59,940,305 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh372058,511,718 - 58,515,360 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362057,945,282 - 57,948,747 (-)NCBINCBI36hg18NCBI36
Build 342057,945,282 - 57,948,747NCBI
Celera2055,252,565 - 55,256,030 (-)NCBI
Cytogenetic Map20q13.33NCBI
HuRef2055,299,100 - 55,302,565 (-)NCBIHuRef
CHM1_12058,412,949 - 58,416,414 (-)NCBICHM1_1
Ppp1r3d
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392178,052,999 - 178,056,256 (-)NCBIGRCm39mm39
GRCm39 Ensembl2178,052,999 - 178,056,265 (-)Ensembl
GRCm382178,411,206 - 178,414,463 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2178,411,206 - 178,414,472 (-)EnsemblGRCm38mm10GRCm38
MGSCv372178,145,911 - 178,149,177 (-)NCBIGRCm37mm9NCBIm37
MGSCv362178,340,614 - 178,343,929 (-)NCBImm8
Celera2182,497,614 - 182,500,880 (-)NCBICelera
Cytogenetic Map2H4NCBI
Ppp1r3d
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.23165,502,384 - 165,505,455 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl3165,502,384 - 165,505,455 (-)Ensembl
Rnor_6.03173,950,613 - 173,953,684 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3173,950,613 - 173,953,684 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03183,137,515 - 183,140,586 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43167,505,678 - 167,508,749 (-)NCBIRGSC3.4rn4RGSC3.4
Celera3167,056,456 - 167,059,527 (+)NCBICelera
Cytogenetic Map3q43NCBI
Ppp1r3d
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049555283,804,557 - 3,807,309 (+)NCBIChiLan1.0ChiLan1.0
PPP1R3D
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12444,550,028 - 44,551,556 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2444,550,320 - 44,551,219 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2443,794,436 - 43,795,617 (-)NCBI
ROS_Cfam_1.02445,416,651 - 45,417,832 (-)NCBI
UMICH_Zoey_3.12444,518,184 - 44,519,364 (-)NCBI
UNSW_CanFamBas_1.02444,637,780 - 44,638,960 (-)NCBI
UU_Cfam_GSD_1.02445,297,767 - 45,298,948 (-)NCBI
Ppp1r3d
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640192,897,627 - 192,900,141 (-)NCBI
SpeTri2.0NW_0049365148,350,275 - 8,353,782 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PPP1R3D
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1759,964,585 - 59,967,113 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11759,963,560 - 59,967,143 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21767,406,676 - 67,409,825 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PPP1R3D
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.124,207,963 - 4,211,630 (+)NCBI
ChlSab1.1 Ensembl24,208,351 - 4,209,250 (+)Ensembl
Vero_WHO_p1.0NW_02366605052,250,088 - 52,253,648 (+)NCBI
Ppp1r3d
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474126,205,076 - 26,208,158 (-)NCBI


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_024926899 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide SSBP01000236 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_024926899   ⟹   XP_024782667
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.12057,644,184 - 57,647,585 (-)NCBI
Mhudiblu_PPA_v02056,292,457 - 56,295,977 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_024782667 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_024782667   ⟸   XM_024926899
- Sequence:


Additional Information

Database Acc Id Source(s)
NCBI Gene PPP1R3D ENTREZGENE