TRIM21 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 9 | 6,874,977 - 6,883,831 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 11 | 6,831,784 - 6,840,633 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 11 | 4,588,083 - 4,596,942 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 11 | 4,254,152 - 4,262,981 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 11 | 4,254,152 - 4,262,981 (-) | Ensembl | panpan1.1 | | panPan2 | |
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TRIM21 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 11 | 4,384,897 - 4,393,702 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 11 | 4,384,897 - 4,393,702 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 11 | 4,406,127 - 4,414,932 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 11 | 4,362,703 - 4,371,502 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 11 | 4,362,702 - 4,371,502 | NCBI | | | | | Celera | 11 | 4,530,327 - 4,539,126 (-) | NCBI | | Celera | | | Cytogenetic Map | 11 | p15.4 | NCBI | | | | | HuRef | 11 | 4,064,388 - 4,073,231 (-) | NCBI | | HuRef | | | CHM1_1 | 11 | 4,406,038 - 4,414,832 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 11 | 4,449,988 - 4,458,819 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Trim21 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 7 | 102,207,127 - 102,214,689 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 7 | 102,207,128 - 102,214,693 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 7 | 102,557,920 - 102,565,482 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 7 | 102,557,921 - 102,565,486 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 7 | 109,706,436 - 109,713,983 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 7 | 102,431,745 - 102,439,243 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 7 | 102,922,872 - 102,930,525 (-) | NCBI | | Celera | | | Cytogenetic Map | 7 | E3 | NCBI | | | | | cM Map | 7 | 54.76 | NCBI | | | | |
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Trim21 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 1 | 166,376,829 - 166,399,441 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 1 | 156,964,896 - 156,987,504 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 1 | 156,964,913 - 156,987,440 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 1 | 164,945,281 - 164,956,667 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 1 | 172,125,359 - 172,136,745 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 1 | 165,032,224 - 165,043,616 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 1 | 167,686,148 - 167,708,735 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 1 | 167,686,173 - 167,708,714 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 1 | 173,871,557 - 173,894,155 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 1 | 160,175,882 - 160,187,661 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 1 | 160,254,898 - 160,276,114 (-) | NCBI | | | | | Celera | 1 | 155,032,978 - 155,043,976 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | q32 | NCBI | | | | |
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Trim21 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955414 | 20,070,359 - 20,077,595 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955414 | 20,066,109 - 20,077,331 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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TRIM21 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 21 | 26,775,227 - 26,783,180 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 21 | 26,775,672 - 26,783,725 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 21 | 26,545,768 - 26,553,727 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 21 | 27,008,568 - 27,016,531 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 21 | 27,008,572 - 27,016,482 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 21 | 26,775,451 - 26,783,414 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 21 | 27,014,746 - 27,022,703 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 21 | 26,901,794 - 26,909,757 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Trim21 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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TRIM21 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 9 | 5,782,200 - 5,791,577 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 9 | 5,782,133 - 5,790,628 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 9 | 6,536,099 - 6,544,261 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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TRIM21 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 1 | 62,451,808 - 62,460,658 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 1 | 62,451,830 - 62,460,659 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666043 | 63,449,436 - 63,458,306 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Trim21 (Heterocephalus glaber - naked mole-rat) |
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