SHISA5 (shisa family member 5) - Rat Genome Database

Name: SHISA5
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: SHISA5 (shisa family member 5) Pan paniscus

Analyze

Symbol:

SHISA5

Name:

shisa family member 5

RGD ID:

11830901

Description:

ENCODES a protein that exhibits WW domain binding (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); ASSOCIATED WITH Aicardi-Goutieres Syndrome 1 (ortholog); genetic disease (ortholog); Progressive Microcephaly with Seizures and Cerebral and Cerebellar Atrophy (ortholog); FOUND IN nuclear envelope (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

shisa homolog 5

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SHISA5 (shisa family member 5)	NCBI	Ortholog
Mus musculus (house mouse):	Shisa5 (shisa family member 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Shisa5 (shisa family member 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Shisa5 (shisa family member 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SHISA5 (shisa family member 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Shisa5 (shisa family member 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SHISA5 (shisa family member 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SHISA5 (shisa family member 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Shisa5 (shisa family member 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	48,442,785 - 48,478,928 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	48,447,553 - 48,483,676 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	48,389,924 - 48,426,064 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	49,471,604 - 49,508,840 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	49,471,604 - 49,508,840 (-)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Aicardi-Goutieres Syndrome 1 (ISO)

genetic disease (ISO)

Progressive Microcephaly with Seizures and Cerebral and Cerebellar Atrophy (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

intrinsic apoptotic signaling pathway by p53 class mediator (ISO)

intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ISO)

positive regulation of canonical NF-kappaB signal transduction (IEA)

Cellular Component

endoplasmic reticulum (IEA)

membrane (IEA)

nuclear envelope (ISO)

nucleus (IEA)

Molecular Function

protein binding (ISO)

WW domain binding (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

SHISA5
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	48,442,785 - 48,478,928 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	48,447,553 - 48,483,676 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	48,389,924 - 48,426,064 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	49,471,604 - 49,508,840 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	49,471,604 - 49,508,840 (-)	Ensembl	panpan1.1		panPan2

SHISA5
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	48,467,876 - 48,504,810 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	48,467,798 - 48,504,826 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	48,509,275 - 48,542,243 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	48,484,201 - 48,516,665 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	3	48,460,056 - 48,497,388 (-)	NCBI		Celera
Cytogenetic Map	3	p21.31	NCBI
HuRef	3	48,563,227 - 48,600,722 (-)	NCBI		HuRef
CHM1_1	3	48,461,497 - 48,494,529 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	3	48,495,881 - 48,533,775 (-)	NCBI		T2T-CHM13v2.0

Shisa5
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	108,867,635 - 108,886,860 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	108,867,633 - 108,886,845 (+)	Ensembl		GRCm39 Ensembl
GRCm38	9	109,038,567 - 109,057,792 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	109,038,565 - 109,057,777 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	108,941,141 - 108,960,280 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	108,896,033 - 108,915,172 (+)	NCBI		MGSCv36	mm8
Celera	9	108,597,405 - 108,616,548 (+)	NCBI		Celera
Cytogenetic Map	9	F2	NCBI
cM Map	9	59.63	NCBI

Shisa5
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	118,569,975 - 118,584,880 (+)	NCBI		GRCr8
mRatBN7.2	8	109,691,504 - 109,706,411 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	109,691,522 - 109,706,408 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	8	115,306,376 - 115,321,300 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	113,505,552 - 113,520,474 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	111,348,354 - 111,363,281 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	117,780,992 - 117,795,923 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	117,780,891 - 117,795,919 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	117,132,759 - 117,147,668 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	114,068,670 - 114,071,301 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	8	114,088,124 - 114,090,755 (+)	NCBI
Celera	8	108,995,220 - 108,997,851 (+)	NCBI		Celera
Cytogenetic Map	8	q32	NCBI

Shisa5
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955532	535,992 - 544,542 (-)	NCBI	ChiLan1.0	ChiLan1.0

SHISA5
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	40,604,183 - 40,624,607 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	40,601,626 - 40,623,601 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	40,519,080 - 40,542,090 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	41,086,985 - 41,110,000 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	41,087,007 - 41,109,997 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	40,324,425 - 40,347,434 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	40,728,984 - 40,752,019 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	41,009,711 - 41,032,715 (+)	NCBI		UU_Cfam_GSD_1.0

Shisa5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	63,506,174 - 63,531,640 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936529	266,456 - 269,732 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936529	266,671 - 292,103 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SHISA5
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	31,180,846 - 31,205,731 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	31,180,844 - 31,205,724 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	34,877,003 - 34,885,569 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SHISA5
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	22	9,871,882 - 9,905,733 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	22	9,873,019 - 9,905,308 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	157,184,124 - 157,219,325 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Shisa5
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624730	2,413,014 - 2,449,065 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624730	2,416,486 - 2,448,836 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_008971720	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008971721	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063602339	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_004670553	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010111428	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSPPAT00000024663 ⟹ ENSPPAP00000005437

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	3	49,471,604 - 49,508,840 (-)	Ensembl

RefSeq Acc Id:

ENSPPAT00000024668 ⟹ ENSPPAP00000005439

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	3	49,471,604 - 49,508,276 (-)	Ensembl

RefSeq Acc Id:

ENSPPAT00000024674 ⟹ ENSPPAP00000005440

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	3	49,472,877 - 49,508,127 (-)	Ensembl

RefSeq Acc Id:

ENSPPAT00000024675 ⟹ ENSPPAP00000005441

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	3	49,472,877 - 49,476,192 (-)	Ensembl

RefSeq Acc Id:

ENSPPAT00000024680 ⟹ ENSPPAP00000005442

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	3	49,480,461 - 49,508,127 (-)	Ensembl

RefSeq Acc Id:

XM_008971720 ⟹ XP_008969968

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	2	48,442,785 - 48,478,928 (-)	NCBI
NHGRI_mPanPan1	3	48,447,553 - 48,483,675 (-)	NCBI
Mhudiblu_PPA_v0	3	48,389,924 - 48,426,062 (-)	NCBI
PanPan1.1	3	49,471,604 - 49,508,276 (-)	NCBI

Sequence:

show sequence

CTCCTCCTGCTCCCCCGGCCAGGGGTTCCGGGAACCGGCCGGGCCGGGGCGGGGCGGGGCGAGG
GAGAGGGGCGGCCGCGCGGATCACTGAGGCTGTGGCGGCACTGCGCCCGGCGCTCGCGTCCGTC
CGCCCGTCCGCCCGCCCAGCCATGACTGCGCCGGTCCCCGCGCCGCGGATCCTGTTGCCGTTGC
TGTTGCTGCTGCTGCTAACGCCGCCTCCGGGTGCGCGTGGTGAGGTGTGTATGGCTTCCCGTGG
ACTCAGCCTCTTCCCCGAGTCCTGTCCAGATTTCTGCTGTGGTACCTGTTATGACCAATACTGC
TGCTCTGACGTGCTGAAGAAATTTGTGTGGAGCGAGGAAAGGTGTGCTGTGCCTGAGGCCAGCG
TGCCTGCCAGTGTAGAGCCGGTGGAGCAGCTGGGCTCGGCGCTGAGGTTTCGCCCTGGCTACAA
CGACCCCATGTCAGGGTTCGGAGCGACCTTGGCCGTTGGCCTGACCATCTTTGTGCTGTCTGTC
GTCACTATCATCATCTGCTTCACCTGCTCCTGCTGCTGCCTTTACAAGACGTGCCGCCGACCAC
GTCCAGTTGTCACCACCACCACATCCACCACTGTGGTGCATGCCCCTTATCCTCAGCCTCCAAG
TGTGCCGCCCAGCTACCCTGGACCAAGCTACCAGGGCTACCACACCATGCCGCCTCAGCCAGGG
ATGCCAGCAGCACCCTACCCAATGCAGTACCCACCACCTTACCCAGCCCAGCCCATGGGCCCAC
CGGCCTACCACGAGACCCTGGCTGGAGGAGCAGCCGCACCCTACCCCGCCAGCCAGCCTCCTTA
CAACCCGGCCTACATGGATGCCCCGAAGGCGGCCCTCTGAGCATTCCCTGGCCTCTCTGTATGC
CACTTGGTTATGTTGTGTGTGTGTGTGAGTGGTGTGCAGGCGCGGTTCCTTACGCCCCATGTGT
GCTGTGTGTGTCCAGGCACGGTTCCTTACGCCCCATGTGTGCTGTGTGTGTCCAGGCACGGTTC
CTTACGCCCCATGTGTGCTGTGTGTGTCCTGCCTGTATATGTGGCTTCCTCTGATGCTGACAAG
GTGGGAACAATCCTTGGCCAGAGTGGGCTGGGACCAGACTTTGTTCTCTTCCTCACCTGAAATT
ATGCTTCCTAAAATCTCAAGCCAAACTCAAAGAATGGGGTGGGGGGGGGGCACCCGTGTGAGGT
GGCCCCCTGAGAGGTGGGGGGCCTCTCCAGGGCACATCTGGAGTTCTTCTCCAGCTTACCCTAG
GGTGACCAAGTATGGCCTGTCACATCAGGTGGCGTAGCTTTCTGTGTGATGCAGATGTGTCCTG
GTTTCGGCAGCGTAGCCAGCTGCTGCTTGAGGCCATGGCTCGTCCCCGGAGATGGGGGTACCCT
TTGCAGAGCCAGGGACATGATGCAGGCGAAGCTTGGGATCTGGCCAAGTTGGACTTTGATCCTT
TGGGCAGATGTCCCATTGCTCCCTGGAGCCTGTCATGCCTGTTGGGGATCAGGCAGCCTCCTGA
TGCCAGAACACCTCAGGCAGAGCCCTACTCAGCTGTACCTGTCTGCCTGGACTGTCCCCTGTCC
CTGCATCTCCCCTGGGACCAGCTGGAGGGCCACATGCACACACAACCTAGCTGCCCCCAGGGAG
CTCTGCTGCCCTTGCTGGCCCTGCCCTTCCCACAGGTGAGCAGGGCTTCTGTCCACCAGCACAC
TCAGTTCTCTTCCCTGCAGTGTTTTCATTTTATTTTAGCCAAACATTTTGCCTGTTTTCTGTTT
TCAAACATGATAGTTGATATGAGACTGAAACCCCTGGGTTGTGGAGGGAAATTGGCTCAGAGAT
GGACAACCTGGCAACTGTGAGTCCCTGCTTCCCGACACCAGCCTCATGGAATATGCAACTCCTG
TACCCCAGTCCAGGGTGTTCTGGCAGCAGGGACACCTGGGCCAATGGGCCATCTGGACCAAAGG
TGGGGTGTGGGGCCCTGGATGGCAGCTCTGGCCCAGACATGAATACCTCGGTGTTCCTCCTCCC
TCTATTACTGTTTCACCAGAGCTGTCTTAGCTCAAATCTGTTGTGTTTCTGAGTCTAGGGTCTG
TACACTTGTTTATAATAAATGCAATCGTTTGGA

hide sequence

RefSeq Acc Id:

XM_008971721 ⟹ XP_008969969

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	2	48,442,785 - 48,478,928 (-)	NCBI
NHGRI_mPanPan1	3	48,447,553 - 48,483,676 (-)	NCBI
Mhudiblu_PPA_v0	3	48,389,924 - 48,426,064 (-)	NCBI
PanPan1.1	3	49,471,604 - 49,508,210 (-)	NCBI

Sequence:

show sequence

GAGGGGCGGCCGCGCGGATCACTGAGGCTGTGGCGGCACTGCGCCCGGCGCTCGCGTCCGTCCG
CCCGTCCGCCCGCCCAGCCATGACTGCGCCGGTCCCCGCGCCGCGGATCCTGTTGCCGTTGCTG
TTGCTGCTGCTGCTAACGCCGCCTCCGGGTGCGCGTGGTGAGGTGTGTATGGCTTCCCGTGGAC
TCAGCCTCTTCCCCGAGTCCTGTCCAGATTTCTGCTGTGGTACCTGTTATGACCAATACTGCTG
CTCTGACGTGCTGAAGAAATTTGTGTGGAGCGAGGAAAGGTGTGCTGTGCCTGAGGCCAGCGTG
CCTGCCAGTGTAGAGCCGGTGGAGCAGCTGGGCTCGGCGCTGAGGTTTCGCCCTGGCTACAACG
ACCCCATGTCAGGGTTCGGAGCGACCTTGGCCGTTGGCCTGACCATCTTTGTGCTGTCTGTCGT
CACTATCATCATCTGCTTCACCTGCTCCTGCTGCTGCCTTTACAAGACGTGCCGCCGACCACGT
CTTGTCACCACCACCACATCCACCACTGTGGTGCATGCCCCTTATCCTCAGCCTCCAAGTGTGC
CGCCCAGCTACCCTGGACCAAGCTACCAGGGCTACCACACCATGCCGCCTCAGCCAGGGATGCC
AGCAGCACCCTACCCAATGCAGTACCCACCACCTTACCCAGCCCAGCCCATGGGCCCACCGGCC
TACCACGAGACCCTGGCTGGAGGAGCAGCCGCACCCTACCCCGCCAGCCAGCCTCCTTACAACC
CGGCCTACATGGATGCCCCGAAGGCGGCCCTCTGAGCATTCCCTGGCCTCTCTGTATGCCACTT
GGTTATGTTGTGTGTGTGTGTGAGTGGTGTGCAGGCGCGGTTCCTTACGCCCCATGTGTGCTGT
GTGTGTCCAGGCACGGTTCCTTACGCCCCATGTGTGCTGTGTGTGTCCAGGCACGGTTCCTTAC
GCCCCATGTGTGCTGTGTGTGTCCTGCCTGTATATGTGGCTTCCTCTGATGCTGACAAGGTGGG
AACAATCCTTGGCCAGAGTGGGCTGGGACCAGACTTTGTTCTCTTCCTCACCTGAAATTATGCT
TCCTAAAATCTCAAGCCAAACTCAAAGAATGGGGTGGGGGGGGGGCACCCGTGTGAGGTGGCCC
CCTGAGAGGTGGGGGGCCTCTCCAGGGCACATCTGGAGTTCTTCTCCAGCTTACCCTAGGGTGA
CCAAGTATGGCCTGTCACATCAGGTGGCGTAGCTTTCTGTGTGATGCAGATGTGTCCTGGTTTC
GGCAGCGTAGCCAGCTGCTGCTTGAGGCCATGGCTCGTCCCCGGAGATGGGGGTACCCTTTGCA
GAGCCAGGGACATGATGCAGGCGAAGCTTGGGATCTGGCCAAGTTGGACTTTGATCCTTTGGGC
AGATGTCCCATTGCTCCCTGGAGCCTGTCATGCCTGTTGGGGATCAGGCAGCCTCCTGATGCCA
GAACACCTCAGGCAGAGCCCTACTCAGCTGTACCTGTCTGCCTGGACTGTCCCCTGTCCCTGCA
TCTCCCCTGGGACCAGCTGGAGGGCCACATGCACACACAACCTAGCTGCCCCCAGGGAGCTCTG
CTGCCCTTGCTGGCCCTGCCCTTCCCACAGGTGAGCAGGGCTTCTGTCCACCAGCACACTCAGT
TCTCTTCCCTGCAGTGTTTTCATTTTATTTTAGCCAAACATTTTGCCTGTTTTCTGTTTTCAAA
CATGATAGTTGATATGAGACTGAAACCCCTGGGTTGTGGAGGGAAATTGGCTCAGAGATGGACA
ACCTGGCAACTGTGAGTCCCTGCTTCCCGACACCAGCCTCATGGAATATGCAACTCCTGTACCC
CAGTCCAGGGTGTTCTGGCAGCAGGGACACCTGGGCCAATGGGCCATCTGGACCAAAGGTGGGG
TGTGGGGCCCTGGATGGCAGCTCTGGCCCAGACATGAATACCTCGGTGTTCCTCCTCCCTCTAT
TACTGTTTCACCAGAGCTGTCTTAGCTCAAATCTGTTGTGTTTCTGAGTCTAGGGTCTGTACAC
TTGTTTATAATAAATGCAATCGTTTGGA

hide sequence

RefSeq Acc Id:

XM_063602339 ⟹ XP_063458409

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	2	48,442,785 - 48,448,198 (-)	NCBI

RefSeq Acc Id:

XR_004670553

Type:

NON-CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	2	48,442,785 - 48,478,918 (-)	NCBI
NHGRI_mPanPan1	3	48,447,553 - 48,483,675 (-)	NCBI
Mhudiblu_PPA_v0	3	48,389,924 - 48,426,062 (-)	NCBI

RefSeq Acc Id:

XR_010111428

Type:

NON-CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	2	48,442,785 - 48,478,923 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_008969968	(Get FASTA)	NCBI Sequence Viewer
	XP_008969969	(Get FASTA)	NCBI Sequence Viewer
	XP_063458409	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000005437.1
	ENSPPAP00000005439
	ENSPPAP00000005439.1
	ENSPPAP00000005440
	ENSPPAP00000005440.1
	ENSPPAP00000005441.1
	ENSPPAP00000005442.1

RefSeq Acc Id:	XP_008969968 ⟸ XM_008971720
- Peptide Label:	isoform X1
- UniProtKB:	A0A2R8ZLG2 (UniProtKB/TrEMBL), A0A2R8ZN85 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTAPVPAPRILLPLLLLLLLTPPPGARGEVCMASRGLSLFPESCPDFCCGTCYDQYCCSDVLKK FVWSEERCAVPEASVPASVEPVEQLGSALRFRPGYNDPMSGFGATLAVGLTIFVLSVVTIIICF TCSCCCLYKTCRRPRPVVTTTTSTTVVHAPYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYP MQYPPPYPAQPMGPPAYHETLAGGAAAPYPASQPPYNPAYMDAPKAAL hide sequence

RefSeq Acc Id:	XP_008969969 ⟸ XM_008971721
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R8ZN85 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTAPVPAPRILLPLLLLLLLTPPPGARGEVCMASRGLSLFPESCPDFCCGTCYDQYCCSDVLKK FVWSEERCAVPEASVPASVEPVEQLGSALRFRPGYNDPMSGFGATLAVGLTIFVLSVVTIIICF TCSCCCLYKTCRRPRLVTTTTSTTVVHAPYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPM QYPPPYPAQPMGPPAYHETLAGGAAAPYPASQPPYNPAYMDAPKAAL hide sequence

RefSeq Acc Id:

ENSPPAP00000005442 ⟸ ENSPPAT00000024680

RefSeq Acc Id:

ENSPPAP00000005440 ⟸ ENSPPAT00000024674

RefSeq Acc Id:

ENSPPAP00000005441 ⟸ ENSPPAT00000024675

RefSeq Acc Id:

ENSPPAP00000005439 ⟸ ENSPPAT00000024668

RefSeq Acc Id:

ENSPPAP00000005437 ⟸ ENSPPAT00000024663

RefSeq Acc Id:	XP_063458409 ⟸ XM_063602339
- Peptide Label:	isoform X3

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000022466	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000024663.1	UniProtKB/TrEMBL
	ENSPPAT00000024668.1	UniProtKB/TrEMBL
	ENSPPAT00000024674.1	UniProtKB/TrEMBL
	ENSPPAT00000024675.1	UniProtKB/TrEMBL
	ENSPPAT00000024680.1	UniProtKB/TrEMBL
InterPro	Shisa	UniProtKB/TrEMBL
KEGG Report	pps:100981659	UniProtKB/TrEMBL
NCBI Gene	SHISA5	ENTREZGENE
PANTHER	PROTEIN SHISA-5	UniProtKB/TrEMBL
	PTHR31395	UniProtKB/TrEMBL
Pfam	Shisa	UniProtKB/TrEMBL
UniProt	A0A2R8ZKF3_PANPA	UniProtKB/TrEMBL
	A0A2R8ZKF7_PANPA	UniProtKB/TrEMBL
	A0A2R8ZLG2	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R8ZN85	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R8ZRH6_PANPA	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar