DSG2 (desmoglein 2) - Rat Genome Database
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Gene: DSG2 (desmoglein 2) Pan paniscus
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Symbol: DSG2
Name: desmoglein 2
RGD ID: 11827008
Description: ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); INVOLVED IN bundle of His cell-Purkinje myocyte adhesion involved in cell communication (ortholog); cell adhesion (ortholog); desmosome organization (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); arrhythmogenic right ventricular dysplasia 1 (ortholog); arrhythmogenic right ventricular dysplasia 10 (ortholog); FOUND IN apical plasma membrane (ortholog); cell junction (ortholog); desmosome (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: desmoglein-2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11828,313,240 - 28,363,781 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1828,313,223 - 28,363,786 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01824,716,181 - 24,766,837 (+)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Comparative Map Data
DSG2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11828,313,240 - 28,363,781 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1828,313,223 - 28,363,786 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01824,716,181 - 24,766,837 (+)NCBIMhudiblu_PPA_v0panPan3
DSG2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1831,498,177 - 31,549,008 (+)EnsemblGRCh38hg38GRCh38
GRCh381831,498,177 - 31,549,008 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371829,078,140 - 29,128,971 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361827,332,170 - 27,380,754 (+)NCBINCBI36hg18NCBI36
Build 341827,332,202 - 27,380,855NCBI
Celera1825,885,149 - 25,935,936 (+)NCBI
Cytogenetic Map18q12.1NCBI
HuRef1825,934,972 - 25,985,760 (+)NCBIHuRef
CHM1_11829,005,270 - 29,056,279 (+)NCBICHM1_1
Dsg2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391820,691,131 - 20,737,583 (+)NCBIGRCm39mm39
GRCm39 Ensembl1820,691,131 - 20,737,578 (+)Ensembl
GRCm381820,558,074 - 20,604,526 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1820,558,074 - 20,604,521 (+)EnsemblGRCm38mm10GRCm38
MGSCv371820,716,617 - 20,763,027 (+)NCBIGRCm37mm9NCBIm37
MGSCv361820,664,999 - 20,713,857 (+)NCBImm8
MGSCv361820,701,117 - 20,745,819 (+)NCBImm8
Celera1821,057,703 - 21,106,454 (+)NCBICelera
Cytogenetic Map18A2NCBI
cM Map1811.42NCBI
Dsg2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21811,846,207 - 11,904,630 (+)NCBI
Rnor_6.0 Ensembl1815,579,315 - 15,637,715 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01815,579,322 - 15,637,720 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01815,353,348 - 15,411,825 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41812,306,321 - 12,366,719 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11812,366,920 - 12,391,365 (+)NCBI
Celera1811,860,565 - 11,912,367 (+)NCBICelera
Cytogenetic Map18p12NCBI
Dsg2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495540218,826,400 - 18,876,188 (+)NCBIChiLan1.0ChiLan1.0
DSG2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl757,982,825 - 58,077,926 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1757,981,918 - 58,030,197 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dsg2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049366821,676,301 - 1,725,132 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DSG2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6115,400,252 - 115,452,473 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.16115,400,223 - 115,453,763 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.26108,027,813 - 108,079,757 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DSG2
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11849,174,539 - 49,227,519 (-)NCBI
ChlSab1.1 Ensembl1849,174,409 - 49,227,347 (-)Ensembl
Dsg2
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247701,315,021 - 1,363,472 (-)NCBI


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_008955818 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide SSBP01000182 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSPPAT00000032094   ⟹   ENSPPAP00000009451
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1828,313,223 - 28,363,786 (+)Ensembl
RefSeq Acc Id: XM_008955818   ⟹   XP_008954066
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.11828,313,240 - 28,363,781 (+)NCBI
Mhudiblu_PPA_v01824,716,181 - 24,766,837 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_008954066 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_008954066   ⟸   XM_008955818
- Sequence:
RefSeq Acc Id: ENSPPAP00000009451   ⟸   ENSPPAT00000032094
Protein Domains
Cadherin


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000027957 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSPPAP00000009451 UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000032094 UniProtKB/TrEMBL
Gene3D-CATH 4.10.900.10 UniProtKB/TrEMBL
InterPro Cadherin-like_dom UniProtKB/TrEMBL
  Cadherin-like_sf UniProtKB/TrEMBL
  Cadherin_CS UniProtKB/TrEMBL
  Catenin_binding_dom_sf UniProtKB/TrEMBL
  Desmoglein UniProtKB/TrEMBL
  Desmosomal_cadherin UniProtKB/TrEMBL
NCBI Gene DSG2 ENTREZGENE
Pfam Cadherin UniProtKB/TrEMBL
PRINTS CADHERIN UniProtKB/TrEMBL
  DESMOCADHERN UniProtKB/TrEMBL
  DESMOGLEIN UniProtKB/TrEMBL
PROSITE CADHERIN_1 UniProtKB/TrEMBL
  CADHERIN_2 UniProtKB/TrEMBL
SMART SM00112 UniProtKB/TrEMBL
Superfamily-SCOP SSF49313 UniProtKB/TrEMBL
UniProt A0A2R8ZWU9_PANPA UniProtKB/TrEMBL