TRAF3IP3 (TRAF3 interacting protein 3)

Gene: TRAF3IP3 (TRAF3 interacting protein 3) Pan paniscus

Analyze

Symbol:

TRAF3IP3

Name:

TRAF3 interacting protein 3

RGD ID:

11825765

Description:

ENCODES a protein that exhibits molecular adaptor activity (inferred); INVOLVED IN antiviral innate immune response (ortholog); cellular response to interferon-alpha (ortholog); cellular response to interferon-beta (ortholog); ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); genetic disease (ortholog); parathyroid carcinoma (ortholog); FOUND IN mitochondrion (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

TRAF3-interacting JNK-activating modulator

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	39,619,080 - 39,645,157 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	39,585,244 - 39,611,411 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	185,332,556 - 185,358,653 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	190,137,880 - 190,162,773 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	190,141,928 - 190,162,598 (+)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

gastrointestinal stromal tumor (ISO)

genetic disease (ISO)

parathyroid carcinoma (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

antiviral innate immune response (ISO)

cellular response to interferon-alpha (ISO)

cellular response to interferon-beta (ISO)

cytoplasmic pattern recognition receptor signaling pathway (IEA)

positive regulation of interferon-alpha production (ISO)

positive regulation of interferon-beta production (ISO)

positive regulation of type I interferon production (IEA)

Cellular Component

membrane (IEA)

mitochondrion (IEA,ISO)

Molecular Function

molecular adaptor activity (IEA)

protein binding (ISO)

References

Genomics

Comparative Map Data

TRAF3IP3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	39,619,080 - 39,645,157 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	39,585,244 - 39,611,411 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	185,332,556 - 185,358,653 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	190,137,880 - 190,162,773 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	190,141,928 - 190,162,598 (+)	Ensembl	panpan1.1		panPan2

TRAF3IP3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	209,756,053 - 209,782,310 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	209,756,032 - 209,782,320 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	209,929,398 - 209,955,655 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	207,996,147 - 208,022,288 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	1	183,160,288 - 183,186,562 (+)	NCBI		Celera
Cytogenetic Map	1	q32.2	NCBI
HuRef	1	180,604,609 - 180,630,813 (+)	NCBI		HuRef
CHM1_1	1	211,201,767 - 211,227,998 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	209,002,813 - 209,029,078 (+)	NCBI		T2T-CHM13v2.0

Traf3ip3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	192,857,812 - 192,883,854 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	192,857,761 - 192,884,011 (-)	Ensembl		GRCm39 Ensembl
GRCm38	1	193,175,504 - 193,201,546 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	193,175,453 - 193,201,703 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	195,001,698 - 195,027,740 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	194,876,230 - 194,902,210 (-)	NCBI		MGSCv36	mm8
Celera	1	200,050,588 - 200,076,654 (-)	NCBI		Celera
Cytogenetic Map	1	H6	NCBI
cM Map	1	97.62	NCBI

Traf3ip3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	107,223,499 - 107,248,358 (-)	NCBI		GRCr8
mRatBN7.2	13	104,694,802 - 104,719,655 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	104,694,805 - 104,719,673 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	13	107,212,415 - 107,237,070 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	108,596,267 - 108,620,922 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	105,814,233 - 105,838,881 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	111,892,744 - 111,917,368 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	111,892,760 - 111,917,587 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	116,447,648 - 116,473,153 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	109,009,596 - 109,034,265 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	13	109,198,700 - 109,223,369 (-)	NCBI
Celera	13	104,125,051 - 104,149,628 (-)	NCBI		Celera
Cytogenetic Map	13	q27	NCBI

Traf3ip3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955489	2,440,455 - 2,464,700 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955489	2,442,319 - 2,468,683 (-)	NCBI	ChiLan1.0	ChiLan1.0

TRAF3IP3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	8,421,163 - 8,444,399 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	8,421,788 - 8,444,397 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	7,998,513 - 8,021,530 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	8,121,697 - 8,144,997 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	8,121,700 - 8,144,989 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	8,051,436 - 8,074,680 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	8,148,468 - 8,171,704 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	8,290,781 - 8,309,799 (+)	NCBI		UU_Cfam_GSD_1.0
UU_Cfam_GSD_1.0	7	8,209,919 - 8,233,156 (+)	NCBI		UU_Cfam_GSD_1.0

Traf3ip3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	66,074,753 - 66,095,407 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936557	3,313,244 - 3,344,819 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936557	3,315,035 - 3,337,763 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TRAF3IP3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	133,190,014 - 133,214,207 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	133,190,020 - 133,214,209 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

TRAF3IP3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	19,671,531 - 19,699,737 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	25	19,671,693 - 19,695,356 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666055	20,270,926 - 20,298,064 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Traf3ip3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624807	2,214,449 - 2,235,048 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624807	2,214,288 - 2,239,449 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003831214	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_003831215	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034945904	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034945907	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034945914	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_057301396	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_004667949	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010110168	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSPPAT00000048106 ⟹ ENSPPAP00000025279

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	1	190,141,928 - 190,162,598 (+)	Ensembl

RefSeq Acc Id:

ENSPPAT00000048107 ⟹ ENSPPAP00000025280

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	1	190,141,928 - 190,159,904 (+)	Ensembl

RefSeq Acc Id:

ENSPPAT00000048111 ⟹ ENSPPAP00000025284

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	1	190,155,806 - 190,162,579 (+)	Ensembl

RefSeq Acc Id:

ENSPPAT00000048115 ⟹ ENSPPAP00000025288

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	1	190,155,806 - 190,159,854 (+)	Ensembl

RefSeq Acc Id:

XM_003831214 ⟹ XP_003831262

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	1	39,619,080 - 39,645,157 (-)	NCBI
NHGRI_mPanPan1	1	39,585,244 - 39,611,411 (-)	NCBI
Mhudiblu_PPA_v0	1	185,332,556 - 185,358,650 (+)	NCBI
PanPan1.1	1	190,137,896 - 190,162,764 (+)	NCBI

Sequence:

show sequence

CACTTAGATGATACCAGAGAGCAAGAGAGAGGAACTGGGGTTTGCGAACCTTGTGGCTTTGTCT
GTTTCCTGTTTCAGCAAGGCTGCTGTGCAAAAAGAAAGACGGTACCAAGAAGGGACGTGCTAAT
GGGGCCCAGACCTATGGATTGAAAGCGTGTGCTTTACCCATCTGCTGTCTTGCTCCATCTGAGA
CCAGAGCCAAGATCTGCCCAGGACTGGAATGCTTTCCCGAGTGGCTTGAGTTGGAGCCTGGGAC
TCGGAGCAGCCTTATTGAGGTACAATTCATGTGCCTGTGGATTTGGATGGCACAATCTGTGTCT
GGGCTAAGGAAAGCAGACTTGGCACCAGTATTAGCCCTGACAGATCCAGGCATCTATTCCAGGA
ACTGGAAGCCAAGCGCAACAGGTGCTTGGAGGTCATCATGATCAGCCCAGACCCCAGGCCCTCC
CCTGGCTTGGCCCGGTGGGCTGAGAGCTACGAGGCCAAGTGTGAGCGCAGGCAAGAGATCCGTG
AAAGCCGCCGCTGCCGTCCCAATGTGACCACTTGCCGCCAGGTGGGGAAGACGCTGAGGATTCA
GCAGAGAGAGCAGCTCCAGAGAGCTCGACTGCAGCAGTTCTTCAGGAGGAGGAACCTGGAGCTA
GAGGAGAAGGGCAAAGCGCAGCGTCCCCAGGCCAGGAATCAAGGGCCCTCCAGGCGGCCAGGAC
AGGTGACTGTCCTCAGGGAACCCTTGTCTTGTGCCAGCAGGATTTCTTCTCCCAGAGAGCAGGT
GACAGGCACCAGCTCTGAAGTCTTTCCAGCCCAGCATCCTCCTCCCTCAGACATCTGCAGGGAT
CTGTCTGACCACCTCTCCTCACAGGCTGGGGGCCTTCCTCCACAGGACACTCCCATCAAGAAGC
CACCCAAACACCACCGTGGTACTCAGACAAAGGCAGAAGGACCAACAATTAAGAACGATGCCAG
TCAGCAAACCAATTACGGAGTTGCAGTTCTGGATAAGGAAATCATCCAGCTTTCTGATTACCTC
AAAGAGGCCCTACAAAGGGAGCTGGTCCTAAAACAGAAAATGGTGATTCTCCAAGACCTACTGT
CCACTCTGATTCAGGCCTCTGACAGCTCTTGGAAGGGACAGCTTAATGAAGACAAACTGAAAGG
GAAACTGAGATCCTTAGAAAACCAGCTGTACACCTGTACCCAGAAATACTCCCCTTGGGGAATG
AAAAAAGTACTACTGGAGATGGAAGACCAGAAAAACAGCTATGAGCAGAAGGCCAAGGAGTCAC
TGCAGAAAGTGCTGGAGGAGAAAATGAATGCAGAGCAGCAACTACAGAGCACACAGCGATCCCT
GGCCCAGGCAGAGCAGAAGTGTGAAGAGTGGAGGAGCCAGTATGAGGCTCTGAAGGAGGACTGG
AGGACCCTTGGGACCCAGCACAGGGAGCTGGAGAGCCAACTCCACGTGCTTCAGTCCAAACTGC
AGGGAGCAGATAGCAGGGACTTACAGATGAACCAGGCCCTGCGATTTTTGGAAAATGAGCACCA
GGAACTGCAGGCCAAGATTGAATGCCTGCAAGGGGACAGAGACCTGTGCAGCTTGTATACCCAG
GACCTACAAGATCAACTAAAAAGGTCAGAGGCAGAGAAACTCACCCTGGTGACCAGAGTACAGC
AGTTGCAGGGTTTGCTTCAGAATCAATCCTTACAGCTTCAAGAACAGGAGAAACTCTTAACAAA
GAAAGATCAGGCTTTGCCTGTGTGGAGTCCAAAGTCCTTCCCTAACGAAGTGGAGCCTGAGGGT
ACAGGGAAGGAGAAAGACTGGGATCTCAGAGACCAGCTGCAAAAGAAGACTTTGCAGCTCCAGG
CCAAGGAAAAGGAGTGCAGAGAACTGCATTCAGAATTAGACAACCTCAGTGACGAGTATCTCTC
CTGCCTGCGTAAGCTGCAGCACTGTCGAGAAGAGCTGAACCAGAGCCAGCAGCTGCCTCCCAGA
AGGCAATGTGGGCGATGGCTCCCAGTGCTGATGGTGGTGATTGCTGCAGCACTGGCAGTGTTCC
TGGCCAATAAAGACAACCTGATGATCTGAATAATTTGTGACAACTGCCTTGGGTGAAAATCAGA
AGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGA
CTTAGGATTTCTGACTTTTTATTATTTTCTTAACCTACTGTAAATAAACTTCACCTGACCAGAT
TGT

hide sequence

RefSeq Acc Id:

XM_003831215 ⟹ XP_003831263

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	1	39,619,080 - 39,645,157 (-)	NCBI
NHGRI_mPanPan1	1	39,585,244 - 39,611,411 (-)	NCBI
Mhudiblu_PPA_v0	1	185,332,560 - 185,358,640 (+)	NCBI
PanPan1.1	1	190,137,880 - 190,162,773 (+)	NCBI

Sequence:

show sequence

TCAGAGTTCAGGGGCCCACTTAGATGATACCAGAGAGCAAGAGAGAGGAACTGGGGTTTGCGAA
CCTTGTGGCTTTGTCTGTTTCCTGTTTCAGCAAGGCTGCTGTGCAAAAAGAAAGACGGTACCAA
GAAGGGACGTGCTAATGGGGCCCAGACCTATGGATTGAAAGCGTGTGCTTTACCCATCTGCTGT
CTTGCTCCATCTGAGACCAGAGCCAAGATCTGCCCAGGACTGGAATGCTTTCCCGAGTGGCTTG
AGTTGGAGCCTGGGACTCGGAGCAGCCTTATTGAGGTACAATTCATGTGCCTGTGGATTTGGAT
GGCACAATCTGTGTCTGGGCTAAGGAAAGCAGACTTGGCACCAGTATTAGCCCTGACAGATCCA
GGCATCTATTCCAGGAACTGGAAGCCAAGCGCAACAGGTGCTTGGAGGTCATCATGATCAGCCC
AGACCCCAGGCCCTCCCCTGGCTTGGCCCGGTGGGCTGAGAGCTACGAGGCCAAGTGTGAGCGC
AGGCAAGAGATCCGTGAAAGCCGCCGCTGCCGTCCCAATGTGACCACTTGCCGCCAGGTGGGGA
AGACGCTGAGGATTCAGCAGAGAGAGCAGCTCCAGAGAGCTCGACTGCAGCAGTTCTTCAGGAG
GAGGAACCTGGAGCTAGAGGAGAAGGGCAAAGCGCAGCGTCCCCAGGCCAGGAATCAAGGGCCC
TCCAGGCGGCCAGGACAGGTGACAGGCACCAGCTCTGAAGTCTTTCCAGCCCAGCATCCTCCTC
CCTCAGACATCTGCAGGGATCTGTCTGACCACCTCTCCTCACAGGCTGGGGGCCTTCCTCCACA
GGACACTCCCATCAAGAAGCCACCCAAACACCACCGTGGTACTCAGACAAAGGCAGAAGGACCA
ACAATTAAGAACGATGCCAGTCAGCAAACCAATTACGGAGTTGCAGTTCTGGATAAGGAAATCA
TCCAGCTTTCTGATTACCTCAAAGAGGCCCTACAAAGGGAGCTGGTCCTAAAACAGAAAATGGT
GATTCTCCAAGACCTACTGTCCACTCTGATTCAGGCCTCTGACAGCTCTTGGAAGGGACAGCTT
AATGAAGACAAACTGAAAGGGAAACTGAGATCCTTAGAAAACCAGCTGTACACCTGTACCCAGA
AATACTCCCCTTGGGGAATGAAAAAAGTACTACTGGAGATGGAAGACCAGAAAAACAGCTATGA
GCAGAAGGCCAAGGAGTCACTGCAGAAAGTGCTGGAGGAGAAAATGAATGCAGAGCAGCAACTA
CAGAGCACACAGCGATCCCTGGCCCAGGCAGAGCAGAAGTGTGAAGAGTGGAGGAGCCAGTATG
AGGCTCTGAAGGAGGACTGGAGGACCCTTGGGACCCAGCACAGGGAGCTGGAGAGCCAACTCCA
CGTGCTTCAGTCCAAACTGCAGGGAGCAGATAGCAGGGACTTACAGATGAACCAGGCCCTGCGA
TTTTTGGAAAATGAGCACCAGGAACTGCAGGCCAAGATTGAATGCCTGCAAGGGGACAGAGACC
TGTGCAGCTTGTATACCCAGGACCTACAAGATCAACTAAAAAGGTCAGAGGCAGAGAAACTCAC
CCTGGTGACCAGAGTACAGCAGTTGCAGGGTTTGCTTCAGAATCAATCCTTACAGCTTCAAGAA
CAGGAGAAACTCTTAACAAAGAAAGATCAGGCTTTGCCTGTGTGGAGTCCAAAGTCCTTCCCTA
ACGAAGTGGAGCCTGAGGGTACAGGGAAGGAGAAAGACTGGGATCTCAGAGACCAGCTGCAAAA
GAAGACTTTGCAGCTCCAGGCCAAGGAAAAGGAGTGCAGAGAACTGCATTCAGAATTAGACAAC
CTCAGTGACGAGTATCTCTCCTGCCTGCGTAAGCTGCAGCACTGTCGAGAAGAGCTGAACCAGA
GCCAGCAGCTGCCTCCCAGAAGGCAATGTGGGCGATGGCTCCCAGTGCTGATGGTGGTGATTGC
TGCAGCACTGGCAGTGTTCCTGGCCAATAAAGACAACCTGATGATCTGAATAATTTGTGACAAC
TGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTAC
AGCTTGGGTTTTCCAACTGACTTAGGATTTCTGACTTTTTATTATTTTCTTAACCTACTGTAAA
TAAACTTCACCTGACCAGATTGTTCCTCAGAA

hide sequence

RefSeq Acc Id:

XM_034945904 ⟹ XP_034801795

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	1	39,619,080 - 39,645,151 (-)	NCBI
NHGRI_mPanPan1	1	39,585,244 - 39,611,396 (-)	NCBI
Mhudiblu_PPA_v0	1	185,332,575 - 185,358,653 (+)	NCBI

RefSeq Acc Id:

XM_057301396 ⟹ XP_057157379

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	1	39,621,734 - 39,637,532 (-)	NCBI
NHGRI_mPanPan1	1	39,587,898 - 39,603,798 (-)	NCBI

RefSeq Acc Id:

XR_010110168

Type:

NON-CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	1	39,619,080 - 39,645,151 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_003831262	(Get FASTA)	NCBI Sequence Viewer
	XP_003831263	(Get FASTA)	NCBI Sequence Viewer
	XP_034801795	(Get FASTA)	NCBI Sequence Viewer
	XP_057157379	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000025279
	ENSPPAP00000025279.1
	ENSPPAP00000025280.1
	ENSPPAP00000025284.1
	ENSPPAP00000025288.1

RefSeq Acc Id:	XP_003831263 ⟸ XM_003831215
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R9BDZ2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MISPDPRPSPGLARWAESYEAKCERRQEIRESRRCRPNVTTCRQVGKTLRIQQREQLQRARLQQ FFRRRNLELEEKGKAQRPQARNQGPSRRPGQVTGTSSEVFPAQHPPPSDICRDLSDHLSSQAGG LPPQDTPIKKPPKHHRGTQTKAEGPTIKNDASQQTNYGVAVLDKEIIQLSDYLKEALQRELVLK QKMVILQDLLSTLIQASDSSWKGQLNEDKLKGKLRSLENQLYTCTQKYSPWGMKKVLLEMEDQK NSYEQKAKESLQKVLEEKMNAEQQLQSTQRSLAQAEQKCEEWRSQYEALKEDWRTLGTQHRELE SQLHVLQSKLQGADSRDLQMNQALRFLENEHQELQAKIECLQGDRDLCSLYTQDLQDQLKRSEA EKLTLVTRVQQLQGLLQNQSLQLQEQEKLLTKKDQALPVWSPKSFPNEVEPEGTGKEKDWDLRD QLQKKTLQLQAKEKECRELHSELDNLSDEYLSCLRKLQHCREELNQSQQLPPRRQCGRWLPVLM VVIAAALAVFLANKDNLMI hide sequence

RefSeq Acc Id:	XP_003831262 ⟸ XM_003831214
- Peptide Label:	isoform X1
- UniProtKB:	A0A2R9BDZ2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MISPDPRPSPGLARWAESYEAKCERRQEIRESRRCRPNVTTCRQVGKTLRIQQREQLQRARLQQ FFRRRNLELEEKGKAQRPQARNQGPSRRPGQVTVLREPLSCASRISSPREQVTGTSSEVFPAQH PPPSDICRDLSDHLSSQAGGLPPQDTPIKKPPKHHRGTQTKAEGPTIKNDASQQTNYGVAVLDK EIIQLSDYLKEALQRELVLKQKMVILQDLLSTLIQASDSSWKGQLNEDKLKGKLRSLENQLYTC TQKYSPWGMKKVLLEMEDQKNSYEQKAKESLQKVLEEKMNAEQQLQSTQRSLAQAEQKCEEWRS QYEALKEDWRTLGTQHRELESQLHVLQSKLQGADSRDLQMNQALRFLENEHQELQAKIECLQGD RDLCSLYTQDLQDQLKRSEAEKLTLVTRVQQLQGLLQNQSLQLQEQEKLLTKKDQALPVWSPKS FPNEVEPEGTGKEKDWDLRDQLQKKTLQLQAKEKECRELHSELDNLSDEYLSCLRKLQHCREEL NQSQQLPPRRQCGRWLPVLMVVIAAALAVFLANKDNLMI hide sequence

RefSeq Acc Id:	XP_034801795 ⟸ XM_034945904
- Peptide Label:	isoform X1
- UniProtKB:	A0A2R9BDZ2 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSPPAP00000025279 ⟸ ENSPPAT00000048106

RefSeq Acc Id:

ENSPPAP00000025280 ⟸ ENSPPAT00000048107

RefSeq Acc Id:

ENSPPAP00000025288 ⟸ ENSPPAT00000048115

RefSeq Acc Id:

ENSPPAP00000025284 ⟸ ENSPPAT00000048111

RefSeq Acc Id:	XP_057157379 ⟸ XM_057301396
- Peptide Label:	isoform X3

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000035769	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000048106.1	UniProtKB/TrEMBL
	ENSPPAT00000048107.1	UniProtKB/TrEMBL
	ENSPPAT00000048111.1	UniProtKB/TrEMBL
	ENSPPAT00000048115.1	UniProtKB/TrEMBL
NCBI Gene	TRAF3IP3	ENTREZGENE
PANTHER	CENTROSOMAL PROTEIN OF 170 KDA	UniProtKB/TrEMBL
	TRAF3-INTERACTING JNK-ACTIVATING MODULATOR	UniProtKB/TrEMBL
Superfamily-SCOP	Tropomyosin	UniProtKB/TrEMBL
UniProt	A0A2R9B6S5_PANPA	UniProtKB/TrEMBL
	A0A2R9BAI8_PANPA	UniProtKB/TrEMBL
	A0A2R9BDZ2	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9BDZ8_PANPA	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Disease Annotations - ClinVar