ANKRD6 (ankyrin repeat domain 6) - Rat Genome Database

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Gene: ANKRD6 (ankyrin repeat domain 6) Pan paniscus
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Symbol: ANKRD6
Name: ankyrin repeat domain 6
RGD ID: 11822317
Description: ENCODES a protein that exhibits chloroplast targeting sequence binding (inferred); INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); positive regulation of Wnt signaling pathway, planar cell polarity pathway (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cytoplasm (inferred); intracellular membrane-bounded organelle (inferred); nucleus (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: ankyrin repeat domain-containing protein 6
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v25109,643,051 - 109,714,379 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan16107,543,901 - 107,615,223 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0687,306,496 - 87,509,352 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1690,631,672 - 90,782,762 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl690,710,411 - 90,782,762 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
ANKRD6
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v25109,643,051 - 109,714,379 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan16107,543,901 - 107,615,223 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0687,306,496 - 87,509,352 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1690,631,672 - 90,782,762 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl690,710,411 - 90,782,762 (+)Ensemblpanpan1.1panPan2
ANKRD6
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38689,433,152 - 89,633,834 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl689,433,152 - 89,633,834 (+)EnsemblGRCh38hg38GRCh38
GRCh37690,142,871 - 90,343,553 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36690,199,616 - 90,400,124 (+)NCBINCBI36Build 36hg18NCBI36
Build 34690,199,650 - 90,397,935NCBI
Celera690,561,418 - 90,762,379 (+)NCBICelera
Cytogenetic Map6q15NCBI
HuRef687,360,022 - 87,560,501 (+)NCBIHuRef
CHM1_1690,240,543 - 90,441,151 (+)NCBICHM1_1
T2T-CHM13v2.0690,642,513 - 90,843,208 (+)NCBIT2T-CHM13v2.0
Ankrd6
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39432,804,027 - 32,950,884 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl432,804,035 - 32,950,841 (-)EnsemblGRCm39 Ensembl
GRCm38432,804,027 - 32,950,885 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl432,804,035 - 32,950,841 (-)EnsemblGRCm38mm10GRCm38
MGSCv37432,891,010 - 33,037,801 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36433,132,648 - 33,279,439 (-)NCBIMGSCv36mm8
Celera432,543,432 - 32,691,408 (-)NCBICelera
Cytogenetic Map4A5NCBI
cM Map414.42NCBI
Ankrd6
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8551,999,225 - 52,139,623 (-)NCBIGRCr8
mRatBN7.2547,197,981 - 47,343,183 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl547,202,873 - 47,343,090 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx549,344,727 - 49,455,057 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0550,943,885 - 51,054,241 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0550,889,350 - 51,000,727 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0548,052,610 - 48,167,568 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl548,052,401 - 48,194,294 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0552,640,128 - 52,778,289 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4549,098,952 - 49,211,771 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera545,962,187 - 46,073,919 (-)NCBICelera
Cytogenetic Map5q21NCBI
Ankrd6
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541116,214,094 - 16,360,573 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541116,206,819 - 16,358,322 (+)NCBIChiLan1.0ChiLan1.0
ANKRD6
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11248,646,173 - 48,844,231 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1248,646,173 - 48,842,451 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1248,453,031 - 48,650,863 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01249,455,055 - 49,652,998 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1249,455,072 - 49,651,210 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11248,771,322 - 48,968,238 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01248,671,428 - 48,869,392 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01248,863,886 - 49,061,782 (+)NCBIUU_Cfam_GSD_1.0
Ankrd6
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494683,718,038 - 83,857,904 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365102,611,290 - 2,752,843 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365102,612,492 - 2,665,063 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANKRD6
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl157,438,000 - 57,645,957 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1157,437,947 - 57,648,262 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2164,482,282 - 64,551,241 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ANKRD6
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11314,187,531 - 14,392,800 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1314,321,797 - 14,389,917 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040190,504,832 - 190,709,462 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ankrd6
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247994,534,668 - 4,598,814 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247994,532,071 - 4,598,874 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003822878 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008976488 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008976489 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014345418 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014345420 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014345421 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034962516 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034962517 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034962518 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034962519 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034962521 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034962522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055113956 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063604958 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063604959 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSPPAT00000033641   ⟹   ENSPPAP00000010986
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl690,710,411 - 90,782,762 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000033646   ⟹   ENSPPAP00000010991
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl690,715,058 - 90,780,078 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000033648   ⟹   ENSPPAP00000010993
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl690,744,014 - 90,780,078 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000033655   ⟹   ENSPPAP00000011000
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl690,744,067 - 90,782,762 (+)Ensembl
RefSeq Acc Id: XM_003822878   ⟹   XP_003822926
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v25109,643,051 - 109,714,379 (+)NCBI
NHGRI_mPanPan16107,543,901 - 107,615,223 (+)NCBI
Mhudiblu_PPA_v0687,438,184 - 87,509,352 (+)NCBI
PanPan1.1690,710,411 - 90,782,762 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008976488   ⟹   XP_008974736
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v25109,643,070 - 109,714,379 (+)NCBI
NHGRI_mPanPan16107,543,919 - 107,615,223 (+)NCBI
Mhudiblu_PPA_v0687,438,191 - 87,507,168 (+)NCBI
PanPan1.1690,710,425 - 90,780,579 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008976489   ⟹   XP_008974737
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v25109,643,070 - 109,714,379 (+)NCBI
NHGRI_mPanPan16107,543,919 - 107,615,223 (+)NCBI
Mhudiblu_PPA_v0687,438,191 - 87,507,168 (+)NCBI
PanPan1.1690,710,425 - 90,780,579 (+)NCBI
Sequence:
RefSeq Acc Id: XM_014345418   ⟹   XP_014200904
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v25109,678,793 - 109,714,379 (+)NCBI
NHGRI_mPanPan16107,577,464 - 107,615,223 (+)NCBI
Mhudiblu_PPA_v0687,471,740 - 87,507,168 (+)NCBI
PanPan1.1690,744,025 - 90,780,579 (+)NCBI
Sequence:
RefSeq Acc Id: XM_014345420   ⟹   XP_014200906
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v25109,678,818 - 109,714,379 (+)NCBI
NHGRI_mPanPan16107,577,464 - 107,615,223 (+)NCBI
Mhudiblu_PPA_v0687,471,740 - 87,507,168 (+)NCBI
PanPan1.1690,744,025 - 90,780,579 (+)NCBI
Sequence:
RefSeq Acc Id: XM_014345421   ⟹   XP_014200907
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v25109,678,818 - 109,714,379 (+)NCBI
NHGRI_mPanPan16107,577,464 - 107,615,223 (+)NCBI
Mhudiblu_PPA_v0687,471,740 - 87,507,168 (+)NCBI
PanPan1.1690,744,025 - 90,780,579 (+)NCBI
Sequence:
RefSeq Acc Id: XM_034962517   ⟹   XP_034818408
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v25109,678,818 - 109,714,379 (+)NCBI
NHGRI_mPanPan16107,577,464 - 107,615,223 (+)NCBI
Mhudiblu_PPA_v0687,471,740 - 87,507,168 (+)NCBI
RefSeq Acc Id: XM_034962518   ⟹   XP_034818409
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v25109,678,818 - 109,714,379 (+)NCBI
NHGRI_mPanPan16107,577,464 - 107,615,223 (+)NCBI
Mhudiblu_PPA_v0687,471,740 - 87,507,168 (+)NCBI
RefSeq Acc Id: XM_034962519   ⟹   XP_034818410
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v25109,643,070 - 109,714,379 (+)NCBI
NHGRI_mPanPan16107,543,918 - 107,615,223 (+)NCBI
Mhudiblu_PPA_v0687,438,191 - 87,509,352 (+)NCBI
RefSeq Acc Id: XM_034962522   ⟹   XP_034818413
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v25109,678,818 - 109,714,379 (+)NCBI
NHGRI_mPanPan16107,577,464 - 107,615,223 (+)NCBI
Mhudiblu_PPA_v0687,471,740 - 87,507,168 (+)NCBI
RefSeq Acc Id: XM_055113956   ⟹   XP_054969931
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v25109,643,070 - 109,714,379 (+)NCBI
NHGRI_mPanPan16107,543,919 - 107,615,223 (+)NCBI
RefSeq Acc Id: XM_063604958   ⟹   XP_063461028
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v25109,678,818 - 109,714,379 (+)NCBI
RefSeq Acc Id: XM_063604959   ⟹   XP_063461029
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v25109,643,070 - 109,714,379 (+)NCBI
RefSeq Acc Id: XP_003822926   ⟸   XM_003822878
- Peptide Label: isoform X2
- UniProtKB: A0A2R9A6L1 (UniProtKB/TrEMBL),   A0A2R9A188 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008974737   ⟸   XM_008976489
- Peptide Label: isoform X7
- UniProtKB: A0A2R9A188 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008974736   ⟸   XM_008976488
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_014200904   ⟸   XM_014345418
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_014200907   ⟸   XM_014345421
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_014200906   ⟸   XM_014345420
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_034818410   ⟸   XM_034962519
- Peptide Label: isoform X9
- UniProtKB: A0A2R9A6L7 (UniProtKB/TrEMBL),   A0A2R9A188 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034818409   ⟸   XM_034962518
- Peptide Label: isoform X6
RefSeq Acc Id: XP_034818408   ⟸   XM_034962517
- Peptide Label: isoform X4
RefSeq Acc Id: XP_034818413   ⟸   XM_034962522
- Peptide Label: isoform X11
RefSeq Acc Id: ENSPPAP00000011000   ⟸   ENSPPAT00000033655
RefSeq Acc Id: ENSPPAP00000010993   ⟸   ENSPPAT00000033648
RefSeq Acc Id: ENSPPAP00000010991   ⟸   ENSPPAT00000033646
RefSeq Acc Id: ENSPPAP00000010986   ⟸   ENSPPAT00000033641
RefSeq Acc Id: XP_054969931   ⟸   XM_055113956
- Peptide Label: isoform X13
- UniProtKB: A0A2R9A188 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063461029   ⟸   XM_063604959
- Peptide Label: isoform X12
RefSeq Acc Id: XP_063461028   ⟸   XM_063604958
- Peptide Label: isoform X3


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000028701 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000033641.1 UniProtKB/TrEMBL
  ENSPPAT00000033646.1 UniProtKB/TrEMBL
  ENSPPAT00000033648.1 UniProtKB/TrEMBL
  ENSPPAT00000033655.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.20 UniProtKB/TrEMBL
InterPro Ankyrin_rpt UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/TrEMBL
KEGG Report pps:100970925 UniProtKB/TrEMBL
NCBI Gene ANKRD6 ENTREZGENE
PANTHER ADA2A-CONTAINING COMPLEX COMPONENT 3, ISOFORM D UniProtKB/TrEMBL
  ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED UniProtKB/TrEMBL
  ANKYRIN 1 UniProtKB/TrEMBL
  ANKYRIN REPEAT PROTEIN UniProtKB/TrEMBL
  MYOTROPHIN UniProtKB/TrEMBL
  SI:CH211-203B8.6 UniProtKB/TrEMBL
Pfam Ank UniProtKB/TrEMBL
  Ank_2 UniProtKB/TrEMBL
  Ank_4 UniProtKB/TrEMBL
PRINTS ANKYRIN UniProtKB/TrEMBL
PROSITE ANK_REP_REGION UniProtKB/TrEMBL
  ANK_REPEAT UniProtKB/TrEMBL
SMART ANK UniProtKB/TrEMBL
Superfamily-SCOP SSF48403 UniProtKB/TrEMBL
UniProt A0A2R9A188 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9A5K4_PANPA UniProtKB/TrEMBL
  A0A2R9A6L1 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9A6L7 ENTREZGENE, UniProtKB/TrEMBL