LOC100967628 (C-C motif chemokine 3-like 1) - Rat Genome Database

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Gene: LOC100967628 (C-C motif chemokine 3-like 1) Pan paniscus
Analyze
Symbol: LOC100967628
Name: C-C motif chemokine 3-like 1
RGD ID: 11822204
Description: ENCODES a protein that exhibits chemokine activity (inferred); cytokine activity (inferred); INVOLVED IN cell chemotaxis (inferred); chemotaxis (inferred); eosinophil chemotaxis (inferred); FOUND IN extracellular region (inferred); extracellular space (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21926,768,414 - 26,772,955 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11728,654,599 - 28,656,459 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01719,094,247 - 19,096,128 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003811075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000019 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_003811075   ⟹   XP_003811123
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21926,768,414 - 26,772,955 (-)NCBI
NHGRI_mPanPan11728,654,599 - 28,656,459 (-)NCBI
Mhudiblu_PPA_v01719,094,247 - 19,096,128 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003811123 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000007011
  ENSPPAP00000007011.1
Reference Protein Sequences
RefSeq Acc Id: XP_003811123   ⟸   XM_003811075
- UniProtKB: A0A2R8ZPZ5 (UniProtKB/TrEMBL)
- Sequence:
Protein Domains
Chemokine interleukin-8-like


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000026094 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000028979.1 UniProtKB/TrEMBL
Gene3D-CATH 2.40.50.40 UniProtKB/TrEMBL
InterPro Chemokine_b/g/d UniProtKB/TrEMBL
  Chemokine_CC_CS UniProtKB/TrEMBL
  Chemokine_IL8-like_dom UniProtKB/TrEMBL
  Interleukin_8-like_sf UniProtKB/TrEMBL
KEGG Report pps:100967628 UniProtKB/TrEMBL
NCBI Gene LOC100967628 ENTREZGENE
PANTHER C-C MOTIF CHEMOKINE 3 UniProtKB/TrEMBL
  PTHR12015 UniProtKB/TrEMBL
Pfam IL8 UniProtKB/TrEMBL
PROSITE SMALL_CYTOKINES_CC UniProtKB/TrEMBL
SMART SCY UniProtKB/TrEMBL
Superfamily-SCOP SSF54117 UniProtKB/TrEMBL
UniProt A0A2R8ZPZ5 ENTREZGENE, UniProtKB/TrEMBL