PRPSAP2 (phosphoribosyl pyrophosphate synthetase associated protein 2) - Rat Genome Database

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Gene: PRPSAP2 (phosphoribosyl pyrophosphate synthetase associated protein 2) Pan paniscus
Analyze
Symbol: PRPSAP2
Name: phosphoribosyl pyrophosphate synthetase associated protein 2
RGD ID: 11821496
Description: ENCODES a protein that exhibits ATP binding (inferred); identical protein binding (inferred); magnesium ion binding (inferred); INVOLVED IN bone development (ortholog); ASSOCIATED WITH autistic disorder (ortholog); common variable immunodeficiency 2 (ortholog); Joubert syndrome 1 (ortholog); FOUND IN protein-containing complex (ortholog); ribose phosphate diphosphokinase complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: phosphoribosyl pyrophosphate synthase-associated protein 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21953,920,357 - 53,996,595 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11758,542,037 - 58,618,788 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01732,316,289 - 32,392,531 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11737,247,504 - 37,321,897 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1737,247,504 - 37,320,704 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
PRPSAP2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21953,920,357 - 53,996,595 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11758,542,037 - 58,618,788 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01732,316,289 - 32,392,531 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11737,247,504 - 37,321,897 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1737,247,504 - 37,320,704 (-)Ensemblpanpan1.1panPan2
PRPSAP2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381718,856,299 - 18,931,287 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1718,840,085 - 18,931,287 (+)EnsemblGRCh38hg38GRCh38
GRCh371718,759,612 - 18,834,600 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361718,702,217 - 18,775,305 (+)NCBINCBI36Build 36hg18NCBI36
Build 341718,702,216 - 18,775,305NCBI
Celera1720,676,623 - 20,748,896 (+)NCBICelera
Cytogenetic Map17p11.2NCBI
HuRef1718,325,616 - 18,400,327 (+)NCBIHuRef
CHM1_11718,768,404 - 18,843,360 (+)NCBICHM1_1
T2T-CHM13v2.01718,802,453 - 18,877,802 (+)NCBIT2T-CHM13v2.0
Prpsap2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391161,620,476 - 61,652,924 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1161,620,476 - 61,652,914 (-)EnsemblGRCm39 Ensembl
GRCm381161,729,650 - 61,762,098 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1161,729,650 - 61,762,088 (-)EnsemblGRCm38mm10GRCm38
MGSCv371161,543,152 - 61,575,590 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361161,545,849 - 61,578,257 (-)NCBIMGSCv36mm8
MGSCv361162,158,719 - 62,191,127 (-)NCBIMGSCv36mm8
Cytogenetic Map11B2NCBI
cM Map1137.96NCBI
Prpsap2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81046,910,282 - 46,945,401 (-)NCBIGRCr8
mRatBN7.21046,410,817 - 46,445,929 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1046,410,835 - 46,445,849 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1051,114,262 - 51,149,036 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01050,604,795 - 50,639,567 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01046,108,208 - 46,142,976 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01048,008,799 - 48,044,435 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1048,008,802 - 48,044,344 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01047,801,645 - 47,837,244 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41047,890,667 - 47,925,430 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11047,904,289 - 47,939,053 (-)NCBI
Celera1045,658,797 - 45,693,561 (-)NCBICelera
Cytogenetic Map10q22NCBI
Prpsap2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955467676,195 - 722,233 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955467676,845 - 722,175 (-)NCBIChiLan1.0ChiLan1.0
PRPSAP2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1541,118,591 - 41,167,647 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl541,039,015 - 41,167,568 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha541,259,690 - 41,308,531 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0541,226,139 - 41,275,052 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl541,222,994 - 41,275,060 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1541,193,893 - 41,242,719 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0541,141,286 - 41,190,416 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0541,333,180 - 41,382,030 (-)NCBIUU_Cfam_GSD_1.0
Prpsap2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560259,871,181 - 59,905,264 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936881682,530 - 715,793 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936881682,011 - 716,082 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PRPSAP2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1260,340,883 - 60,376,568 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11260,340,879 - 60,387,856 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21262,850,813 - 62,869,074 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PRPSAP2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11617,573,627 - 17,634,290 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660593,238,732 - 3,312,942 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Prpsap2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248495,298,410 - 5,334,161 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248495,298,389 - 5,334,161 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003805044 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008966703 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008966719 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008966745 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008966750 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014342127 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014342128 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034942277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034942278 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034942279 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034942280 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034942281 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034942282 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055101187 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063599203 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063599204 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063599205 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000019 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSPPAT00000012052   ⟹   ENSPPAP00000002507
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1737,247,504 - 37,320,704 (-)Ensembl
Ensembl Acc Id: ENSPPAT00000012114   ⟹   ENSPPAP00000002523
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1737,248,074 - 37,311,153 (-)Ensembl
Ensembl Acc Id: ENSPPAT00000012115   ⟹   ENSPPAP00000002524
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1737,248,074 - 37,311,153 (-)Ensembl
Ensembl Acc Id: ENSPPAT00000012125   ⟹   ENSPPAP00000002527
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1737,289,152 - 37,311,153 (-)Ensembl
Ensembl Acc Id: ENSPPAT00000012130   ⟹   ENSPPAP00000002530
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1737,299,221 - 37,311,153 (-)Ensembl
Ensembl Acc Id: ENSPPAT00000012133   ⟹   ENSPPAP00000002533
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1737,309,708 - 37,311,153 (-)Ensembl
RefSeq Acc Id: XM_003805044   ⟹   XP_003805092
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21953,922,166 - 53,996,595 (+)NCBI
NHGRI_mPanPan11758,544,312 - 58,618,788 (+)NCBI
Mhudiblu_PPA_v01732,316,289 - 32,390,705 (-)NCBI
PanPan1.11737,247,504 - 37,320,729 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008966719   ⟹   XP_008964967
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21953,920,456 - 53,996,595 (+)NCBI
NHGRI_mPanPan11758,542,558 - 58,618,788 (+)NCBI
Mhudiblu_PPA_v01732,316,289 - 32,392,489 (-)NCBI
PanPan1.11737,247,504 - 37,321,897 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008966745   ⟹   XP_008964993
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21953,922,166 - 53,996,595 (+)NCBI
NHGRI_mPanPan11758,544,298 - 58,618,788 (+)NCBI
Mhudiblu_PPA_v01732,316,289 - 32,390,706 (-)NCBI
PanPan1.11737,247,504 - 37,320,729 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008966750   ⟹   XP_008964998
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21953,920,357 - 53,996,595 (+)NCBI
NHGRI_mPanPan11758,542,037 - 58,618,788 (+)NCBI
Mhudiblu_PPA_v01732,316,289 - 32,392,525 (-)NCBI
PanPan1.11737,247,504 - 37,321,897 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014342127   ⟹   XP_014197613
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21953,922,166 - 53,996,595 (+)NCBI
NHGRI_mPanPan11758,544,318 - 58,618,788 (+)NCBI
Mhudiblu_PPA_v01732,316,289 - 32,390,705 (-)NCBI
PanPan1.11737,247,504 - 37,320,704 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014342128   ⟹   XP_014197614
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21953,922,166 - 53,996,595 (+)NCBI
NHGRI_mPanPan11758,544,335 - 58,618,788 (+)NCBI
Mhudiblu_PPA_v01732,316,289 - 32,390,705 (-)NCBI
PanPan1.11737,247,504 - 37,320,704 (-)NCBI
Sequence:
RefSeq Acc Id: XM_034942278   ⟹   XP_034798169
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21953,922,610 - 53,996,595 (+)NCBI
NHGRI_mPanPan11758,544,732 - 58,618,788 (+)NCBI
Mhudiblu_PPA_v01732,316,289 - 32,390,265 (-)NCBI
RefSeq Acc Id: XM_055101187   ⟹   XP_054957162
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21953,931,149 - 53,996,595 (+)NCBI
NHGRI_mPanPan11758,553,321 - 58,618,788 (+)NCBI
RefSeq Acc Id: XM_063599203   ⟹   XP_063455273
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21953,920,369 - 53,996,595 (+)NCBI
RefSeq Acc Id: XM_063599204   ⟹   XP_063455274
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21953,923,526 - 53,996,595 (+)NCBI
RefSeq Acc Id: XM_063599205   ⟹   XP_063455275
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21953,923,431 - 53,996,595 (+)NCBI
RefSeq Acc Id: XP_008964998   ⟸   XM_008966750
- Peptide Label: isoform X2
- UniProtKB: A0A2R8ZC92 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_003805092   ⟸   XM_003805044
- Peptide Label: isoform X2
- UniProtKB: A0A2R8ZC92 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008964993   ⟸   XM_008966745
- Peptide Label: isoform X2
- UniProtKB: A0A2R8ZC92 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008964967   ⟸   XM_008966719
- Peptide Label: isoform X2
- UniProtKB: A0A2R8ZC92 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_014197614   ⟸   XM_014342128
- Peptide Label: isoform X2
- UniProtKB: A0A2R8ZC92 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_014197613   ⟸   XM_014342127
- Peptide Label: isoform X2
- UniProtKB: A0A2R8ZC92 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_034798169   ⟸   XM_034942278
- Peptide Label: isoform X2
- UniProtKB: A0A2R8ZC92 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSPPAP00000002507   ⟸   ENSPPAT00000012052
Ensembl Acc Id: ENSPPAP00000002527   ⟸   ENSPPAT00000012125
Ensembl Acc Id: ENSPPAP00000002533   ⟸   ENSPPAT00000012133
Ensembl Acc Id: ENSPPAP00000002530   ⟸   ENSPPAT00000012130
Ensembl Acc Id: ENSPPAP00000002524   ⟸   ENSPPAT00000012115
Ensembl Acc Id: ENSPPAP00000002523   ⟸   ENSPPAT00000012114
RefSeq Acc Id: XP_054957162   ⟸   XM_055101187
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063455273   ⟸   XM_063599203
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063455275   ⟸   XM_063599205
- Peptide Label: isoform X2
- UniProtKB: A0A2R8ZC92 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063455274   ⟸   XM_063599204
- Peptide Label: isoform X2
- UniProtKB: A0A2R8ZC92 (UniProtKB/TrEMBL)

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000011006 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000012052.1 UniProtKB/TrEMBL
  ENSPPAT00000012114.1 UniProtKB/TrEMBL
  ENSPPAT00000012115.1 UniProtKB/TrEMBL
  ENSPPAT00000012125.1 UniProtKB/TrEMBL
  ENSPPAT00000012130.1 UniProtKB/TrEMBL
  ENSPPAT00000012133.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.2020 UniProtKB/TrEMBL
InterPro Pribosyltran_N UniProtKB/TrEMBL
  PRibTrfase_dom UniProtKB/TrEMBL
  PRTase-like UniProtKB/TrEMBL
  Rib-P_diPkinase UniProtKB/TrEMBL
KEGG Report pps:100982883 UniProtKB/TrEMBL
NCBI Gene PRPSAP2 ENTREZGENE
PANTHER PHOSPHORIBOSYL PYROPHOSPHATE SYNTHASE-ASSOCIATED PROTEIN 2 UniProtKB/TrEMBL
  PTHR10210 UniProtKB/TrEMBL
Pfam Pribosyl_synth UniProtKB/TrEMBL
  Pribosyltran_N UniProtKB/TrEMBL
SMART Pribosyltran_N UniProtKB/TrEMBL
Superfamily-SCOP SSF53271 UniProtKB/TrEMBL
UniProt A0A2R8ZBU6_PANPA UniProtKB/TrEMBL
  A0A2R8ZC92 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R8ZCB1_PANPA UniProtKB/TrEMBL
  A0A2R8ZFT0_PANPA UniProtKB/TrEMBL
  A0A2R8ZFU3_PANPA UniProtKB/TrEMBL
  A0A2R8ZIL5_PANPA UniProtKB/TrEMBL