ECT2 (epithelial cell transforming 2) - Rat Genome Database

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Gene: ECT2 (epithelial cell transforming 2) Pan paniscus
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Symbol: ECT2
Name: epithelial cell transforming 2
RGD ID: 11819735
Description: ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN activation of GTPase activity (ortholog); activation of protein kinase activity (ortholog); bicellular tight junction assembly (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN bicellular tight junction (ortholog); cell-cell junction (ortholog); centralspindlin complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: epithelial cell transforming sequence 2 oncogene
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.13177,938,161 - 178,008,381 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3177,938,164 - 178,008,381 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v03169,756,885 - 169,828,087 (+)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

References

Genomics

Comparative Map Data
ECT2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.13177,938,161 - 178,008,381 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3177,938,164 - 178,008,381 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v03169,756,885 - 169,828,087 (+)NCBIMhudiblu_PPA_v0panPan3
ECT2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl3172,750,682 - 172,821,474 (+)EnsemblGRCh38hg38GRCh38
GRCh383172,750,694 - 172,829,273 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh373172,468,516 - 172,539,264 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 363173,951,336 - 174,021,957 (+)NCBINCBI36hg18NCBI36
Build 343173,954,999 - 174,021,965NCBI
Celera3170,871,530 - 170,938,230 (+)NCBI
Cytogenetic Map3q26.31NCBI
HuRef3169,839,394 - 169,910,198 (+)NCBIHuRef
CHM1_13172,431,384 - 172,502,159 (+)NCBICHM1_1
Ect2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39327,151,371 - 27,208,402 (-)NCBIGRCm39mm39
GRCm39 Ensembl327,151,371 - 27,208,027 (-)Ensembl
GRCm38327,097,222 - 27,154,253 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl327,097,222 - 27,153,878 (-)EnsemblGRCm38mm10GRCm38
MGSCv37326,996,144 - 27,052,800 (-)NCBIGRCm37mm9NCBIm37
MGSCv36327,288,299 - 27,344,909 (-)NCBImm8
Celera327,060,619 - 27,116,904 (-)NCBICelera
Cytogenetic Map3A3NCBI
Ect2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.22109,975,813 - 110,037,911 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl2109,975,813 - 110,037,911 (-)Ensembl
Rnor_6.02112,769,385 - 112,831,476 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2112,769,385 - 112,831,476 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02132,490,047 - 132,552,138 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42112,969,261 - 113,001,056 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12112,915,386 - 112,971,181 (-)NCBI
Celera2105,188,023 - 105,250,067 (-)NCBICelera
Cytogenetic Map2q24NCBI
Ect2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554202,768,800 - 2,828,230 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554202,769,542 - 2,827,843 (+)NCBIChiLan1.0ChiLan1.0
ECT2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13436,897,441 - 36,958,501 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3436,896,958 - 36,958,384 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3445,907,851 - 45,969,821 (+)NCBI
ROS_Cfam_1.03436,981,676 - 37,043,349 (+)NCBI
UMICH_Zoey_3.13436,919,236 - 36,980,903 (+)NCBI
UNSW_CanFamBas_1.03436,888,783 - 36,950,259 (+)NCBI
UU_Cfam_GSD_1.03437,146,019 - 37,207,403 (+)NCBI
Ect2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602103,592,041 - 103,679,947 (+)NCBI
SpeTri2.0NW_0049367035,744 - 45,636 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ECT2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13111,248,134 - 111,314,828 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113111,248,215 - 111,310,746 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
ECT2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11516,612,738 - 16,685,455 (-)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl1516,612,443 - 16,685,386 (-)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366606325,373,942 - 25,446,633 (-)NCBIVero_WHO_p1.0
Ect2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473050,773,465 - 50,841,427 (+)NCBIHetGla_female_1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000057381   ⟹   ENSPPAP00000034498
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl3177,938,164 - 178,008,381 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000057387   ⟹   ENSPPAP00000034504
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl3177,938,164 - 178,008,381 (+)Ensembl
RefSeq Acc Id: XM_003831943   ⟹   XP_003831991
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.13177,938,161 - 178,008,381 (+)NCBI
Mhudiblu_PPA_v03169,756,891 - 169,828,087 (+)NCBI
Sequence:
RefSeq Acc Id: XM_003831944   ⟹   XP_003831992
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.13177,938,164 - 178,008,381 (+)NCBI
Mhudiblu_PPA_v03169,756,890 - 169,828,087 (+)NCBI
Sequence:
RefSeq Acc Id: XM_003831945   ⟹   XP_003831993
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.13177,938,164 - 178,008,381 (+)NCBI
Mhudiblu_PPA_v03169,756,890 - 169,828,087 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008957313   ⟹   XP_008955561
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.13177,938,164 - 178,008,381 (+)NCBI
Mhudiblu_PPA_v03169,756,885 - 169,828,087 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008957314   ⟹   XP_008955562
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.13177,939,813 - 178,008,381 (+)NCBI
Mhudiblu_PPA_v03169,759,037 - 169,828,087 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008957316   ⟹   XP_008955564
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.13177,938,161 - 178,008,381 (+)NCBI
Mhudiblu_PPA_v03169,756,886 - 169,828,087 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024928352   ⟹   XP_024784120
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.13177,938,164 - 178,008,381 (+)NCBI
Mhudiblu_PPA_v03169,756,889 - 169,828,087 (+)NCBI
Sequence:
RefSeq Acc Id: XM_034957727   ⟹   XP_034813618
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v03169,757,735 - 169,828,087 (+)NCBI
RefSeq Acc Id: XM_034957728   ⟹   XP_034813619
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v03169,757,735 - 169,828,087 (+)NCBI
RefSeq Acc Id: XM_034957730   ⟹   XP_034813621
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v03169,757,735 - 169,828,087 (+)NCBI
RefSeq Acc Id: XM_034957731   ⟹   XP_034813622
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v03169,757,735 - 169,828,087 (+)NCBI
Reference Sequences
RefSeq Acc Id: XP_008955564   ⟸   XM_008957316
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_003831991   ⟸   XM_003831943
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_003831993   ⟸   XM_003831945
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_003831992   ⟸   XM_003831944
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_008955561   ⟸   XM_008957313
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_008955562   ⟸   XM_008957314
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_024784120   ⟸   XM_024928352
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_034813621   ⟸   XM_034957730
- Peptide Label: isoform X3
RefSeq Acc Id: XP_034813619   ⟸   XM_034957728
- Peptide Label: isoform X2
RefSeq Acc Id: XP_034813618   ⟸   XM_034957727
- Peptide Label: isoform X1
RefSeq Acc Id: XP_034813622   ⟸   XM_034957731
- Peptide Label: isoform X3
RefSeq Acc Id: ENSPPAP00000034504   ⟸   ENSPPAT00000057387
RefSeq Acc Id: ENSPPAP00000034498   ⟸   ENSPPAT00000057381


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000040084 Ensembl, ENTREZGENE
Ensembl Protein ENSPPAP00000034498 ENTREZGENE
  ENSPPAP00000034504 ENTREZGENE
NCBI Gene ECT2 ENTREZGENE